Cow genome map
| Conread name: | Ss1.1-Pig1-38B05.5 |
| Conread position: | 48-232 |
| Cow position: | chr11:44313478-44313673 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 49-173 |
| Cow position: | chr11:28189072-28189192 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 49-174 |
| Cow position: | chr11:31535198-31535073 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-181 |
| Cow position: | chr11:21426882-21426750 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-183 |
| Cow position: | chr11:17470206-17470340 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 49-185 |
| Cow position: | chr11:80663850-80663714 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-214 |
| Cow position: | chr11:11070236-11070072 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 160, 142 |
| Conread position: | 49-226 |
| Cow position: | chr11:17392830-17393017 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 49-228 |
| Cow position: | chr11:30093160-30093347 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 49-229 |
| Cow position: | chr11:15733699-15733517 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 112, 129 |
| Conread position: | 49-229 |
| Cow position: | chr11:22255155-22254963 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-229 |
| Cow position: | chr11:83224073-83223895 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 138, 149 |
| Conread position: | 49-230 |
| Cow position: | chr11:29071902-29071720 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 138, 79 |
| Conread position: | 49-230 |
| Cow position: | chr11:30206507-30206310 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 49-230 |
| Cow position: | chr11:79886657-79886849 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 49-230 |
| Cow position: | chr11:84591021-84590836 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 49-234 |
| Cow position: | chr11:65332078-65332275 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-237 |
| Cow position: | chr11:29066834-29066644 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-240 |
| Cow position: | chr11:35152182-35152381 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 53-230 |
| Cow position: | chr11:54445686-54445509 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 59-230 |
| Cow position: | chr11:42319815-42319995 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 22 |
Show alignments to all cow chromosomes.