Cow genome map
| Conread name: | Ss1.1-Pig1-38B05.5 |
| Conread position: | 49-180 |
| Cow position: | chr16:42916845-42916714 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-184 |
| Cow position: | chr16:1749974-1750107 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 49-184 |
| Cow position: | chr16:51463292-51463162 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 49-185 |
| Cow position: | chr16:30298803-30298938 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 49-185 |
| Cow position: | chr16:40535138-40535003 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 49-185 |
| Cow position: | chr16:45747747-45747611 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr16:46066903-46067031 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-185 |
| Cow position: | chr16:46376797-46376926 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-226 |
| Cow position: | chr16:26067754-26067565 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-229 |
| Cow position: | chr16:14603119-14602935 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 49-230 |
| Cow position: | chr16:607325-607521 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 187 |
| Conread position: | 49-230 |
| Cow position: | chr16:2488634-2488827 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 157 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr16:20362016-20361826 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 49-230 |
| Cow position: | chr16:26341858-26342046 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 49-230 |
| Cow position: | chr16:48091562-48091372 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 49-230 |
| Cow position: | chr16:51519288-51519481 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr16:53254744-53254927 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 49-232 |
| Cow position: | chr16:51443615-51443420 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-234 |
| Cow position: | chr16:16862346-16862150 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 49-236 |
| Cow position: | chr16:27993718-27993518 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-239 |
| Cow position: | chr16:54587-54385 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-240 |
| Cow position: | chr16:52610602-52610402 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 136, 50 |
| Conread position: | 49-252 |
| Cow position: | chr16:2852731-2852542 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 50-230 |
| Cow position: | chr16:17981782-17981974 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 51-229 |
| Cow position: | chr16:46615731-46615920 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 51-233 |
| Cow position: | chr16:25746573-25746767 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 52-235 |
| Cow position: | chr16:3568079-3568279 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 54-229 |
| Cow position: | chr16:44471280-44471469 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 80-230 |
| Cow position: | chr16:14043917-14043751 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 87-230 |
| Cow position: | chr16:19079973-19080128 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 100, 0 |
Show alignments to all cow chromosomes.