Cow genome map
| Conread name: | Ss1.1-Pig1-38B05.5 |
| Conread position: | 49-164 |
| Cow position: | chr17:23923065-23922948 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 49-172 |
| Cow position: | chr17:3230816-3230937 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-181 |
| Cow position: | chr17:13650751-13650883 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-184 |
| Cow position: | chr17:681734-681865 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 49-185 |
| Cow position: | chr17:7873313-7873177 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr17:9347286-9347421 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 49-185 |
| Cow position: | chr17:20016712-20016573 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 49-227 |
| Cow position: | chr17:467382-467572 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 49-227 |
| Cow position: | chr17:15672376-15672565 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 49-228 |
| Cow position: | chr17:43160203-43160017 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 53 |
| Conread position: | 49-230 |
| Cow position: | chr17:18148230-18148058 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 49-230 |
| Cow position: | chr17:29811020-29810824 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 49-230 |
| Cow position: | chr17:31463053-31463245 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 138, 84 |
| Conread position: | 49-230 |
| Cow position: | chr17:34183092-34182899 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr17:43213683-43213877 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 49-232 |
| Cow position: | chr17:1305644-1305835 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 136, 108 |
| Conread position: | 49-233 |
| Cow position: | chr17:15802034-15801838 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 49-233 |
| Cow position: | chr17:44101387-44101191 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 163 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-238 |
| Cow position: | chr17:16809895-16810089 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-243 |
| Cow position: | chr17:32106411-32106205 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 49-432 |
| Cow position: | chr17:23629782-23629400 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 0 |
| Conread position: | 52-230 |
| Cow position: | chr17:27932393-27932583 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 59-230 |
| Cow position: | chr17:14052503-14052324 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 74-233 |
| Cow position: | chr17:11352423-11352253 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.