Cow genome map
| Conread name: | Ss1.1-Pig1-38B05.5 |
| Conread position: | 49-184 |
| Cow position: | chr21:10649509-10649374 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr21:3114977-3115106 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 49-185 |
| Cow position: | chr21:4488392-4488524 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 49-185 |
| Cow position: | chr21:10650383-10650247 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr21:26715818-26715953 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 49-226 |
| Cow position: | chr21:40212583-40212774 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 49-228 |
| Cow position: | chr21:26100486-26100678 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 49-229 |
| Cow position: | chr21:24932191-24932005 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 138, 52 |
| Conread position: | 49-230 |
| Cow position: | chr21:364775-364582 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 49-230 |
| Cow position: | chr21:3240306-3240113 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 49-230 |
| Cow position: | chr21:4685917-4685724 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 49-230 |
| Cow position: | chr21:8127790-8127603 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 138, 111 |
| Conread position: | 49-230 |
| Cow position: | chr21:21022747-21022558 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 138, 93 |
| Conread position: | 49-230 |
| Cow position: | chr21:21206066-21205873 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr21:24434329-24434136 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr21:25041947-25041754 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr21:30286258-30286450 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 49-230 |
| Cow position: | chr21:44532665-44532472 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-232 |
| Cow position: | chr21:30583665-30583470 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 49-233 |
| Cow position: | chr21:33416442-33416245 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 49-242 |
| Cow position: | chr21:5046972-5047179 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-245 |
| Cow position: | chr21:18717098-18717303 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 108, 67 |
| Conread position: | 51-225 |
| Cow position: | chr21:26214851-26215036 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 136, 105 |
| Conread position: | 51-228 |
| Cow position: | chr21:34508401-34508591 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 51-230 |
| Cow position: | chr21:2792645-2792459 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 51-230 |
| Cow position: | chr21:3651427-3651236 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 51-230 |
| Cow position: | chr21:4648159-4648349 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 136, 163 |
| Conread position: | 51-233 |
| Cow position: | chr21:26230403-26230211 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 53-230 |
| Cow position: | chr21:32005564-32005376 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 132, 122 |
| Conread position: | 59-185 |
| Cow position: | chr21:21522169-21522295 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-229 |
| Cow position: | chr21:20393450-20393272 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 77 |
| Conread position: | 77-230 |
| Cow position: | chr21:4547742-4547578 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 35 |
Show alignments to all cow chromosomes.