Cow genome map
| Conread name: | Ss1.1-Pig1-38B05.5 |
| Conread position: | 49-185 |
| Cow position: | chr6:716611-716749 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 49-185 |
| Cow position: | chr6:16763953-16763820 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 49-185 |
| Cow position: | chr6:21862004-21861869 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 49-185 |
| Cow position: | chr6:33373994-33373858 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr6:44630548-44630682 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 49-185 |
| Cow position: | chr6:52493539-52493403 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr6:55276160-55276296 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-228 |
| Cow position: | chr6:21654284-21654096 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 49-228 |
| Cow position: | chr6:22240897-22240714 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 49-228 |
| Cow position: | chr6:65612088-65611899 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 49-229 |
| Cow position: | chr6:64040214-64040024 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 49-230 |
| Cow position: | chr6:341542-341347 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 129 |
| Conread position: | 49-230 |
| Cow position: | chr6:11767838-11768025 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 138, 62 |
| Conread position: | 49-230 |
| Cow position: | chr6:16277901-16278095 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:18469588-18469395 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:27204175-27203984 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 49-230 |
| Cow position: | chr6:28130906-28131099 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:29835244-29835436 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:35302553-35302740 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:47973808-47974000 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 157 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:49614756-49614950 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 49-230 |
| Cow position: | chr6:58181454-58181261 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 49-230 |
| Cow position: | chr6:65064259-65064071 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 49-230 |
| Cow position: | chr6:66214364-66214178 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 49-237 |
| Cow position: | chr6:22334998-22334801 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 138, 80 |
| Conread position: | 49-238 |
| Cow position: | chr6:56343482-56343683 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 50-166 |
| Cow position: | chr6:2549962-2549849 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 50-230 |
| Cow position: | chr6:630831-631019 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 137, 66 |
| Conread position: | 50-230 |
| Cow position: | chr6:24931635-24931822 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 51-230 |
| Cow position: | chr6:68573956-68574147 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 51-232 |
| Cow position: | chr6:35719693-35719886 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 70-185 |
| Cow position: | chr6:11527766-11527879 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 75-230 |
| Cow position: | chr6:19244562-19244395 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 78-235 |
| Cow position: | chr6:43798683-43798519 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 110-230 |
| Cow position: | chr6:28868457-28868325 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.