Cow genome map
| Conread name: | Ss1.1-Pig1-38B05.5 |
| Conread position: | 44-230 |
| Cow position: | chr9:40130023-40129825 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 49-155 |
| Cow position: | chr9:9938751-9938857 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-167 |
| Cow position: | chr9:40151427-40151545 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:12189772-12189906 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:14504925-14505061 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:24683520-24683384 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:26471721-26471853 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:27763239-27763104 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:31866660-31866793 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:36694243-36694108 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:37184772-37184903 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:40401450-40401588 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 49-185 |
| Cow position: | chr9:55344070-55344206 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 49-224 |
| Cow position: | chr9:58328716-58328904 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 49-228 |
| Cow position: | chr9:9810697-9810882 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 136, 59 |
| Conread position: | 49-228 |
| Cow position: | chr9:55619005-55618816 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 49-229 |
| Cow position: | chr9:5025595-5025788 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 49-230 |
| Cow position: | chr9:1048438-1048246 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 78, 125 |
| Conread position: | 49-230 |
| Cow position: | chr9:13563911-13564105 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 49-230 |
| Cow position: | chr9:15764568-15764377 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 49-230 |
| Cow position: | chr9:20527970-20528155 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 49-230 |
| Cow position: | chr9:24593332-24593141 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 49-232 |
| Cow position: | chr9:39296434-39296630 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 49-233 |
| Cow position: | chr9:15750477-15750662 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 49-233 |
| Cow position: | chr9:47696776-47696567 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 49-237 |
| Cow position: | chr9:7636431-7636238 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 49-238 |
| Cow position: | chr9:32201283-32201483 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 32 |
| Conread position: | 49-241 |
| Cow position: | chr9:51207350-51207144 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 49-242 |
| Cow position: | chr9:42890630-42890424 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 50-230 |
| Cow position: | chr9:11926841-11927031 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 51-230 |
| Cow position: | chr9:23714789-23714602 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 136, 54 |
| Conread position: | 53-230 |
| Cow position: | chr9:41971882-41972071 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 59-230 |
| Cow position: | chr9:47839155-47838982 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 67-230 |
| Cow position: | chr9:13352765-13352929 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 108, 41 |
Show alignments to all cow chromosomes.