Cow genome map

Conread name: Ss1.1-Pig1-3A18.5

Conread position: 432-628
Cow position: chr1:57575850-57575645 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 45

Conread position: 432-628
Cow position: chr1:91875000-91874798 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 150

Conread position: 433-630
Cow position: chr1:69539607-69539812 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 435-628
Cow position: chr1:74822359-74822570 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 438-626
Cow position: chr1:48769718-48769919 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 36

Conread position: 438-659
Cow position: chr1:98511843-98512075 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 177

Conread position: 438-665
Cow position: chr1:47233564-47233322 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 207

Conread position: 440-627
Cow position: chr1:72011892-72011695 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 440-628
Cow position: chr1:62964195-62964385 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 5

Conread position: 440-679
Cow position: chr1:81613307-81613556 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 41, 5

Conread position: 444-628
Cow position: chr1:71079037-71078842 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 186

Conread position: 444-708
Cow position: chr1:50991855-50992127 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 32

Conread position: 445-626
Cow position: chr1:86110809-86110627 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 121

Conread position: 445-628
Cow position: chr1:56618729-56618536 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 144

Conread position: 445-628
Cow position: chr1:67688658-67688464 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 133

Conread position: 445-628
Cow position: chr1:78857400-78857210 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 445-628
Cow position: chr1:89349884-89350084 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 445-629
Cow position: chr1:22827089-22827278 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 445-642
Cow position: chr1:95499572-95499363 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 445-642
Cow position: chr1:100800278-100800483 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 183

Conread position: 445-644
Cow position: chr1:41138210-41138009 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 445-646
Cow position: chr1:41696980-41697192 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 116

Conread position: 445-647
Cow position: chr1:33331166-33330956 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 123

Conread position: 445-652
Cow position: chr1:7971337-7971556 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 24

Conread position: 445-652
Cow position: chr1:80841574-80841786 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 192

Conread position: 445-668
Cow position: chr1:96136407-96136624 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 14

Conread position: 445-679
Cow position: chr1:67821289-67821052 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 445-682
Cow position: chr1:82884468-82884227 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 147

Conread position: 446-628
Cow position: chr1:72304454-72304270 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 160

Conread position: 446-642
Cow position: chr1:82936669-82936465 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 186

Conread position: 446-653
Cow position: chr1:53397908-53398119 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 446-654
Cow position: chr1:26934344-26934129 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 80

Conread position: 447-619
Cow position: chr1:53452466-53452645 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 147

Conread position: 447-627
Cow position: chr1:42887343-42887159 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 447-629
Cow position: chr1:68845232-68845049 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 56

Conread position: 447-629
Cow position: chr1:95215257-95215070 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 160

Conread position: 447-657
Cow position: chr1:77232650-77232431 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 194

Conread position: 447-680
Cow position: chr1:39510131-39509882 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 448-627
Cow position: chr1:36578453-36578635 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 15

Conread position: 448-628
Cow position: chr1:43311832-43311652 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 33

Conread position: 449-589
Cow position: chr1:97761540-97761680 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 457-629
Cow position: chr1:64678642-64678813 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 162

Conread position: 457-668
Cow position: chr1:31855302-31855090 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 42, 19

Conread position: 461-647
Cow position: chr1:82556457-82556271 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 158, 93

Conread position: 462-653
Cow position: chr1:48618301-48618101 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 178

Conread position: 467-611
Cow position: chr1:60466185-60466331 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 13

Conread position: 469-661
Cow position: chr1:95683419-95683220 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 472-622
Cow position: chr1:64572479-64572628 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 473-708
Cow position: chr1:89342021-89341787 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 14

Conread position: 474-680
Cow position: chr1:67918717-67918927 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 134

Conread position: 477-647
Cow position: chr1:89448868-89449038 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 478-628
Cow position: chr1:78838764-78838914 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 65

Conread position: 478-646
Cow position: chr1:89388310-89388482 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 20

Conread position: 478-707
Cow position: chr1:45553271-45553045 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 210, 70

Conread position: 480-616
Cow position: chr1:20205001-20205134 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 480-623
Cow position: chr1:85647810-85647668 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 122

Conread position: 480-668
Cow position: chr1:67654348-67654162 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 480-677
Cow position: chr1:3882487-3882289 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 148, 18

Conread position: 485-646
Cow position: chr1:93590610-93590448 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 486-628
Cow position: chr1:62034855-62034710 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 92

Conread position: 486-628
Cow position: chr1:82880623-82880763 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 487-601
Cow position: chr1:40935790-40935675 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 487-628
Cow position: chr1:79844443-79844584 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 488-628
Cow position: chr1:100852692-100852828 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 488-646
Cow position: chr1:13637684-13637526 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 488-647
Cow position: chr1:43389072-43388915 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 65

Conread position: 489-628
Cow position: chr1:46143481-46143343 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 489-628
Cow position: chr1:93044001-93044136 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 489-628
Cow position: chr1:95974380-95974519 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 113

Conread position: 489-629
Cow position: chr1:66752649-66752509 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 489-646
Cow position: chr1:35671523-35671675 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 489-647
Cow position: chr1:3942235-3942079 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 489-652
Cow position: chr1:42175702-42175867 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 24

Conread position: 489-667
Cow position: chr1:56225448-56225628 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 177

Conread position: 489-673
Cow position: chr1:45478879-45478700 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 490-628
Cow position: chr1:25383650-25383787 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 490-666
Cow position: chr1:86682579-86682407 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 490-672
Cow position: chr1:19962034-19962213 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 142, 64

Conread position: 491-616
Cow position: chr1:80442725-80442849 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 66

Conread position: 491-623
Cow position: chr1:71295314-71295178 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 491-627
Cow position: chr1:64113809-64113672 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 491-627
Cow position: chr1:73960685-73960818 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 491-627
Cow position: chr1:83618626-83618486 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 491-627
Cow position: chr1:84811957-84811821 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 491-627
Cow position: chr1:91023483-91023349 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 491-628
Cow position: chr1:12464682-12464545 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position: chr1:37322016-37321883 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 491-628
Cow position: chr1:42537341-42537203 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 107

Conread position: 491-628
Cow position: chr1:55753233-55753097 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 491-628
Cow position: chr1:65028516-65028651 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 491-628
Cow position: chr1:70828885-70829021 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 94

Conread position: 491-628
Cow position: chr1:87197802-87197939 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position: chr1:97090308-97090445 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-629
Cow position: chr1:7023103-7023241 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 491-630
Cow position: chr1:92590179-92590312 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 491-632
Cow position: chr1:19227075-19226933 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 491-634
Cow position: chr1:45575916-45576058 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 491-637
Cow position: chr1:3167091-3166947 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 132, 63

Conread position: 491-646
Cow position: chr1:54267955-54267801 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 138, 53

Conread position: 491-646
Cow position: chr1:83025182-83025026 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 491-653
Cow position: chr1:1981131-1980971 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 491-653
Cow position: chr1:41027057-41027218 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 491-653
Cow position: chr1:81481400-81481239 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 491-653
Cow position: chr1:102529875-102529717 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 491-657
Cow position: chr1:10716480-10716643 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 491-657
Cow position: chr1:95072314-95072479 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 491-661
Cow position: chr1:816427-816259 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 63

Conread position: 491-664
Cow position: chr1:81290489-81290659 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 491-667
Cow position: chr1:86912422-86912597 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 491-668
Cow position: chr1:61884895-61885072 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 165

Conread position: 491-668
Cow position: chr1:85162565-85162389 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 491-672
Cow position: chr1:84010754-84010929 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 491-673
Cow position: chr1:55705264-55705079 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 58

Conread position: 491-674
Cow position: chr1:8670755-8670938 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 491-678
Cow position: chr1:90868459-90868271 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 112

Conread position: 491-680
Cow position: chr1:808839-808646 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 491-707
Cow position: chr1:57297464-57297675 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 200, 100

Conread position: 491-707
Cow position: chr1:81580160-81580375 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 200, 67

Conread position: 491-708
Cow position: chr1:71253571-71253366 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 492-622
Cow position: chr1:27959567-27959438 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 492-622
Cow position: chr1:41056661-41056791 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 492-626
Cow position: chr1:89381259-89381392 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 492-627
Cow position: chr1:53458681-53458813 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 492-627
Cow position: chr1:83582950-83582815 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 492-628
Cow position: chr1:48214172-48214039 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 492-644
Cow position: chr1:52039621-52039770 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 492-644
Cow position: chr1:58754811-58754658 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 132, 66

Conread position: 492-644
Cow position: chr1:98030906-98031056 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 492-646
Cow position: chr1:20104248-20104403 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 492-647
Cow position: chr1:90621523-90621366 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 492-661
Cow position: chr1:57090961-57091129 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 492-676
Cow position: chr1:52912913-52912732 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 492-700
Cow position: chr1:18780351-18780140 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 142

Conread position: 493-620
Cow position: chr1:12978666-12978793 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 493-623
Cow position: chr1:38401782-38401913 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 58

Conread position: 493-626
Cow position: chr1:89509937-89509804 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 493-627
Cow position: chr1:43505513-43505647 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 493-628
Cow position: chr1:70538595-70538730 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 493-628
Cow position: chr1:80584414-80584548 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 493-629
Cow position: chr1:197021-196886 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 493-647
Cow position: chr1:79003960-79004108 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 493-650
Cow position: chr1:45315652-45315496 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 493-668
Cow position: chr1:98551704-98551877 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 495-627
Cow position: chr1:17196640-17196509 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 495-628
Cow position: chr1:81569041-81568909 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 496-588
Cow position: chr1:61560736-61560644 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 496-627
Cow position: chr1:5135722-5135591 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 17

Conread position: 496-628
Cow position: chr1:24133073-24132944 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 496-628
Cow position: chr1:84255754-84255886 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 496-653
Cow position: chr1:759431-759275 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 496-708
Cow position: chr1:37886819-37886619 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 195, 38

Conread position: 497-619
Cow position: chr1:4581342-4581220 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 497-645
Cow position: chr1:83072429-83072576 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 497-647
Cow position: chr1:78811027-78811176 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 499-627
Cow position: chr1:79146827-79146701 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 500-619
Cow position: chr1:89230238-89230121 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 500-628
Cow position: chr1:61005571-61005444 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 500-629
Cow position: chr1:62036793-62036922 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 500-630
Cow position: chr1:52429669-52429539 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 500-633
Cow position: chr1:44125644-44125512 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 54

Conread position: 500-641
Cow position: chr1:68688574-68688716 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 501-627
Cow position: chr1:78066545-78066419 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 501-651
Cow position: chr1:61741975-61741827 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 53

Conread position: 502-627
Cow position: chr1:45555359-45555483 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 502-628
Cow position: chr1:61011174-61011300 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 502-666
Cow position: chr1:76658084-76657911 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 131

Conread position: 502-678
Cow position: chr1:97750626-97750450 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 171, 128

Conread position: 502-698
Cow position: chr1:98576040-98576236 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 189, 120

Conread position: 502-707
Cow position: chr1:8347116-8347319 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 100

Conread position: 502-709
Cow position: chr1:52995017-52995224 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 130

Conread position: 503-628
Cow position: chr1:88913314-88913438 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 504-623
Cow position: chr1:99605192-99605073 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 506-708
Cow position: chr1:83783933-83783731 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 185, 143

Conread position: 508-628
Cow position: chr1:43499297-43499178 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 513-674
Cow position: chr1:53640719-53640876 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 515-646
Cow position: chr1:70483328-70483196 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 517-630
Cow position: chr1:85866167-85866281 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 518-628
Cow position: chr1:55685969-55685859 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 519-647
Cow position: chr1:50585868-50585738 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 525-630
Cow position: chr1:69378583-69378479 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 529-647
Cow position: chr1:42774930-42775049 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 532-656
Cow position: chr1:72356379-72356505 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 547-677
Cow position: chr1:80306341-80306210 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 78

Conread position: 548-708
Cow position: chr1:44986562-44986727 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 55

Show alignments to all cow chromosomes.