Cow genome map

Conread name: Ss1.1-Pig1-3A18.5

Conread position: 438-646
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 124

Conread position: 445-623
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 14

Conread position: 445-626
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 158

Conread position: 445-628
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 113

Conread position: 445-628
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 445-628
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 149, 0

Conread position: 445-628
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 445-631
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 146

Conread position: 445-662
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 14

Conread position: 446-630
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 30

Conread position: 446-672
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 133, 13

Conread position: 447-628
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 472-627
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 5

Conread position: 478-630
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 86

Conread position: 487-703
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 114

Conread position: 488-668
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 489-622
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 128

Conread position: 489-628
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 76

Conread position: 489-639
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 489-646
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 46

Conread position: 489-646
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 489-676
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 9

Conread position: 490-598
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 490-630
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 491-589
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 491-619
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 491-622
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 491-622
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 491-623
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 491-627
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 491-627
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 116
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 116
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-629
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 491-643
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 132, 83

Conread position: 491-646
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 46

Conread position: 491-646
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 0

Conread position: 491-646
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 150, 51

Conread position: 491-649
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 491-651
Cow position:
Alignm length: 162
Alignm identity: 137
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 139, 118

Conread position: 491-664
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 9

Conread position: 491-668
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 18

Conread position: 491-679
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 491-706
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 199, 56

Conread position: 491-707
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 492-621
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 492-628
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 492-652
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 492-657
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 109, 139

Conread position: 493-663
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 494-628
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 495-649
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 5

Conread position: 496-627
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 496-628
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 496-628
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 6, 30

Conread position: 496-628
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 496-650
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 496-653
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 132, 0

Conread position: 496-657
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 496-708
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 497-666
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 497-668
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 498-651
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 66

Conread position: 500-659
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 501-627
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 56

Conread position: 501-628
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 502-625
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 503-659
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 509-628
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 525-646
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 525-650
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 537-656
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 539-708
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 152, 91

Show alignments to all cow chromosomes.