Cow genome map

Conread name: Ss1.1-Pig1-3A18.5

Conread position: 371-628
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 21

Conread position: 438-622
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 439-628
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 6

Conread position: 440-628
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 5

Conread position: 440-646
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 5

Conread position: 440-659
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 5

Conread position: 444-620
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 444-628
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 444-650
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 198

Conread position: 445-622
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 445-622
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 58, 20

Conread position: 445-628
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 29

Conread position: 445-628
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 99

Conread position: 445-628
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 84

Conread position: 445-628
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 126

Conread position: 445-646
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 24

Conread position: 445-650
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 28

Conread position: 445-653
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 445-665
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 64

Conread position: 445-676
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 43, 20

Conread position: 446-653
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 122

Conread position: 447-622
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 448-628
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 174

Conread position: 448-628
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 21

Conread position: 449-627
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 131

Conread position: 449-661
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 449-666
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 184

Conread position: 451-628
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 102

Conread position: 451-628
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 452-628
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 452-628
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 167

Conread position: 457-628
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 96

Conread position: 458-678
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 102

Conread position: 462-665
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 31, 99

Conread position: 469-628
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 96

Conread position: 469-639
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 101, 79

Conread position: 478-624
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 478-640
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 478-661
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 152, 0

Conread position: 478-682
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 145, 11

Conread position: 480-628
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 81

Conread position: 480-628
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 480-708
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 176, 7

Conread position: 487-628
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 487-651
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 488-628
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 488-651
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 0

Conread position: 488-652
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 86

Conread position: 489-627
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 72

Conread position: 489-628
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 78

Conread position: 489-652
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 148, 0

Conread position: 489-653
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 489-669
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 489-680
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 119

Conread position: 490-645
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 491-589
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 491-610
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 491-614
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 491-620
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-622
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 491-622
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 491-622
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 491-623
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 491-623
Cow position:
Alignm length: 133
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 491-626
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 491-627
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-627
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 491-627
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 491-627
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 119
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 0

Conread position: 491-628
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 126

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 491-628
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 491-628
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 41

Conread position: 491-628
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 52

Conread position: 491-628
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 491-629
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 491-629
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 491-644
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 143

Conread position: 491-646
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 76

Conread position: 491-646
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 491-646
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 491-651
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 491-653
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 491-654
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 491-655
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 491-657
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 491-657
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 491-661
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 491-661
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 491-666
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 136

Conread position: 491-667
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 142

Conread position: 491-667
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 491-680
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 137, 18

Conread position: 491-680
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 111

Conread position: 491-707
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 200, 100

Conread position: 491-707
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 63

Conread position: 491-708
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 204, 27

Conread position: 492-622
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 492-628
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 51

Conread position: 492-645
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 492-647
Cow position:
Alignm length: 157
Alignm identity: 128
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 493-628
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 69

Conread position: 493-653
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 496-622
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 496-626
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 496-627
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 496-628
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 497-628
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 497-646
Cow position:
Alignm length: 155
Alignm identity: 127
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 497-656
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 139

Conread position: 498-628
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 500-622
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 500-628
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 500-630
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 500-665
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 501-652
Cow position:
Alignm length: 152
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 502-628
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 503-628
Cow position:
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 507-663
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 510-628
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 513-657
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 515-628
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 518-628
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-645
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 546-668
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.