Cow genome map


           Conread name:
           Ss1.1-Pig1-3A18.5
        

               Conread position:
               5-412
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 154
               

               Conread position:
               433-627
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               433-643
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               440-620
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               41, 5
               

               Conread position:
               440-658
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               445-616
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               445-622
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               445-622
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               445-623
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               445-628
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               445-628
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               445-628
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               445-629
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               445-635
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               445-643
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               445-646
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               445-653
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               445-657
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               32, 164
               

               Conread position:
               445-665
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               445-679
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               446-629
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               447-628
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               447-628
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 108
               

               Conread position:
               447-691
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 193
               

               Conread position:
               468-646
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               470-652
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 162
               

               Conread position:
               481-626
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               488-628
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               488-676
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               132, 49
               

               Conread position:
               488-707
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               489-628
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               489-628
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               489-646
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               151, 65
               

               Conread position:
               489-682
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               162, 112
               

               Conread position:
               490-628
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               490-646
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               491-607
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-615
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-622
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               491-623
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-627
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               491-627
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-646
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               491-646
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               491-646
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               133, 45
               

               Conread position:
               491-649
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               491-651
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               491-652
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               491-653
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               491-653
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               133, 83
               

               Conread position:
               491-654
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               491-656
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               491-687
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               491-707
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               200, 139
               

               Conread position:
               491-716
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               132, 121
               

               Conread position:
               492-616
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-617
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-619
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-619
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 102
               

               Conread position:
               492-630
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-653
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               493-627
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               493-628
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-653
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               494-644
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               495-628
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               496-628
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               496-646
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               497-653
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               498-619
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               498-628
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               104, 110
               

               Conread position:
               498-641
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               498-644
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               502-628
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-707
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               187, 120
               

               Conread position:
               505-678
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               124, 46
               

               Conread position:
               507-716
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               154, 123
               

               Conread position:
               511-651
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               513-647
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               517-628
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               518-652
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               519-707
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 0
               
Show alignments to all cow chromosomes.