Cow genome map
| Conread name: | Ss1.1-Pig1-3A18.5 |
| Conread position: | 445-621 |
| Cow position: | chr26:14481621-14481431 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 445-665 |
| Cow position: | chr26:31605338-31605572 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 200 |
| Conread position: | 445-708 |
| Cow position: | chr26:7212636-7212387 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 446-628 |
| Cow position: | chr26:31137522-31137336 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 447-628 |
| Cow position: | chr26:830687-830511 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 447-628 |
| Cow position: | chr26:16435704-16435526 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 447-657 |
| Cow position: | chr26:7687306-7687086 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 466-681 |
| Cow position: | chr26:6337755-6337970 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 469-653 |
| Cow position: | chr26:11875253-11875065 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 473-629 |
| Cow position: | chr26:13802089-13802242 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 474-628 |
| Cow position: | chr26:33202095-33201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 478-628 |
| Cow position: | chr26:8307548-8307398 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 478-679 |
| Cow position: | chr26:34154114-34154314 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 481-628 |
| Cow position: | chr26:18741073-18740927 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 484-646 |
| Cow position: | chr26:13292506-13292668 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 5 |
| Conread position: | 487-628 |
| Cow position: | chr26:20291706-20291562 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 488-628 |
| Cow position: | chr26:33392381-33392524 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 489-628 |
| Cow position: | chr26:28423278-28423416 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 490-628 |
| Cow position: | chr26:34724878-34724745 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 490-630 |
| Cow position: | chr26:26537531-26537386 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 491-619 |
| Cow position: | chr26:17651953-17652081 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-622 |
| Cow position: | chr26:23924843-23924974 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-626 |
| Cow position: | chr26:19110177-19110312 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-626 |
| Cow position: | chr26:19591476-19591611 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-626 |
| Cow position: | chr26:21637044-21636910 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 491-628 |
| Cow position: | chr26:5836827-5836690 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chr26:12145125-12144988 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chr26:12940393-12940530 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chr26:20769844-20769981 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chr26:22892452-22892315 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-650 |
| Cow position: | chr26:9491919-9492072 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 491-653 |
| Cow position: | chr26:647730-647574 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 491-653 |
| Cow position: | chr26:7314615-7314777 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-653 |
| Cow position: | chr26:12964701-12964543 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 491-653 |
| Cow position: | chr26:24240673-24240833 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 491-654 |
| Cow position: | chr26:23582952-23582791 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 491-657 |
| Cow position: | chr26:19446127-19446288 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 491-661 |
| Cow position: | chr26:8700054-8699883 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 159 |
| Conread position: | 491-661 |
| Cow position: | chr26:14175275-14175445 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-666 |
| Cow position: | chr26:107018-107195 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 491-668 |
| Cow position: | chr26:677987-677813 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 491-678 |
| Cow position: | chr26:32863673-32863490 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 492-622 |
| Cow position: | chr26:5666042-5666173 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 492-628 |
| Cow position: | chr26:35704382-35704514 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 492-647 |
| Cow position: | chr26:1328862-1328713 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 111 |
| Conread position: | 492-680 |
| Cow position: | chr26:26328907-26329087 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 493-623 |
| Cow position: | chr26:26888138-26888010 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 493-628 |
| Cow position: | chr26:19636287-19636424 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 493-670 |
| Cow position: | chr26:33241884-33242060 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 493-708 |
| Cow position: | chr26:13021150-13020939 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 495-682 |
| Cow position: | chr26:33525097-33524902 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 497-637 |
| Cow position: | chr26:34611182-34611042 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 498-646 |
| Cow position: | chr26:9535518-9535663 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 501-672 |
| Cow position: | chr26:19774296-19774125 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 101 |
| Conread position: | 502-620 |
| Cow position: | chr26:23315777-23315896 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 502-657 |
| Cow position: | chr26:2739452-2739297 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 503-628 |
| Cow position: | chr26:32361979-32362105 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 503-691 |
| Cow position: | chr26:18825280-18825093 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 129 |
| Conread position: | 503-707 |
| Cow position: | chr26:6865029-6865234 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 511-649 |
| Cow position: | chr26:28409998-28410134 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 513-679 |
| Cow position: | chr26:7183982-7183815 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 134, 109 |
| Conread position: | 525-707 |
| Cow position: | chr26:28759793-28759608 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 31 |
Show alignments to all cow chromosomes.