Cow genome map


           Conread name:
           Ss1.1-Pig1-3A18.5
        

               Conread position:
               432-682
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               434-630
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               440-628
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               440-655
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               444-629
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               445-628
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               445-628
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               54, 93
               

               Conread position:
               445-628
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               445-646
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               445-653
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               445-671
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               446-628
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 10
               

               Conread position:
               446-630
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 95
               

               Conread position:
               449-652
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 181
               

               Conread position:
               475-627
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               477-629
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               478-628
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               478-708
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               480-629
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               480-670
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               486-623
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               487-628
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               487-648
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               487-672
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               488-623
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               488-628
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               489-643
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               489-646
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               489-652
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 115
               

               Conread position:
               489-653
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               490-622
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               490-627
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               490-628
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               490-646
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               490-658
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               490-711
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               491-589
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-607
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-622
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               491-627
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               491-628
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-629
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-647
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               491-647
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               491-650
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               491-652
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 119
               

               Conread position:
               491-653
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               491-666
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               491-667
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               491-669
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               133, 63
               

               Conread position:
               491-672
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               491-674
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 125
               

               Conread position:
               491-699
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               491-708
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               492-629
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 112
               

               Conread position:
               492-653
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               492-653
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               492-658
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               493-601
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               493-622
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-626
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               493-627
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-629
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               493-652
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-666
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               495-629
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               495-647
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               496-628
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               496-629
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               496-647
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               497-651
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               498-628
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               500-653
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               500-670
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               503-647
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 60
               

               Conread position:
               504-657
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               504-679
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               508-628
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               511-628
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               511-648
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               517-646
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 41
               

               Conread position:
               517-649
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               520-706
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               171, 110
               

               Conread position:
               525-623
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               527-646
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               544-651
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 0
               
Show alignments to all cow chromosomes.