Cow genome map
Conread name: | Ss1.1-Pig1-3A18.5 |
Conread position: | 433-646 |
Cow position: | chr29:5063049-5063275 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 158 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 440-628 |
Cow position: | chr29:29176705-29176506 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 49, 5 |
Conread position: | 440-642 |
Cow position: | chr29:36217027-36217236 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 40, 5 |
Conread position: | 444-653 |
Cow position: | chr29:19125256-19125457 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 445-627 |
Cow position: | chr29:32211142-32210961 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 49, 20 |
Conread position: | 445-628 |
Cow position: | chr29:17109882-17110068 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 33, 115 |
Conread position: | 445-657 |
Cow position: | chr29:34773820-34773597 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 52, 213 |
Conread position: | 445-678 |
Cow position: | chr29:20903371-20903133 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 174 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 446-652 |
Cow position: | chr29:9310532-9310734 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 117, 28 |
Conread position: | 447-652 |
Cow position: | chr29:12680074-12680290 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 40, 183 |
Conread position: | 448-661 |
Cow position: | chr29:36210077-36210279 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 153 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 58, 29 |
Conread position: | 457-626 |
Cow position: | chr29:35501713-35501544 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 28 |
Conread position: | 458-627 |
Cow position: | chr29:32197637-32197807 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 458-656 |
Cow position: | chr29:29324487-29324288 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 99 |
Conread position: | 469-619 |
Cow position: | chr29:24578816-24578965 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 469-628 |
Cow position: | chr29:22735153-22734997 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 470-681 |
Cow position: | chr29:40299067-40298859 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 146 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 137, 133 |
Conread position: | 480-628 |
Cow position: | chr29:19949273-19949418 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 480-671 |
Cow position: | chr29:23243913-23243723 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 142 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 144, 9 |
Conread position: | 486-646 |
Cow position: | chr29:20770312-20770472 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 15, 72 |
Conread position: | 488-647 |
Cow position: | chr29:43099778-43099616 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 118 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 13, 119 |
Conread position: | 489-627 |
Cow position: | chr29:34359006-34358868 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 489-628 |
Cow position: | chr29:38980104-38979964 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 9, 114 |
Conread position: | 489-628 |
Cow position: | chr29:41112907-41112770 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 490-650 |
Cow position: | chr29:30708645-30708493 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 490-653 |
Cow position: | chr29:30681736-30681574 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 140, 8 |
Conread position: | 490-662 |
Cow position: | chr29:31200232-31200405 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 149, 8 |
Conread position: | 490-670 |
Cow position: | chr29:34687809-34687987 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 127 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 491-588 |
Cow position: | chr29:40634167-40634071 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 82 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 491-623 |
Cow position: | chr29:26540566-26540435 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 100 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 491-624 |
Cow position: | chr29:26615746-26615610 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 491-626 |
Cow position: | chr29:25737440-25737305 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 491-627 |
Cow position: | chr29:7624153-7624288 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 491-628 |
Cow position: | chr29:1556906-1557042 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 491-628 |
Cow position: | chr29:4874909-4874769 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 39, 100 |
Conread position: | 491-628 |
Cow position: | chr29:9709668-9709806 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 491-628 |
Cow position: | chr29:17804509-17804645 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 491-628 |
Cow position: | chr29:40117546-40117682 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 491-629 |
Cow position: | chr29:21285334-21285471 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 491-646 |
Cow position: | chr29:38978506-38978661 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 127 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 132, 91 |
Conread position: | 491-647 |
Cow position: | chr29:30918523-30918674 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 491-647 |
Cow position: | chr29:44139269-44139114 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 111 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 491-648 |
Cow position: | chr29:5892819-5892977 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 491-652 |
Cow position: | chr29:17222387-17222549 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 95, 104 |
Conread position: | 491-653 |
Cow position: | chr29:26559269-26559111 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 491-661 |
Cow position: | chr29:4480196-4480030 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 491-668 |
Cow position: | chr29:23155202-23155375 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 133, 39 |
Conread position: | 491-668 |
Cow position: | chr29:28840130-28840304 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 491-709 |
Cow position: | chr29:32290583-32290799 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 148 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 192, 127 |
Conread position: | 492-627 |
Cow position: | chr29:5186518-5186383 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 101 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 492-627 |
Cow position: | chr29:29769376-29769241 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 77, 62 |
Conread position: | 492-628 |
Cow position: | chr29:19762246-19762379 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 492-629 |
Cow position: | chr29:22723576-22723713 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 112 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 492-650 |
Cow position: | chr29:36530842-36531002 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 492-652 |
Cow position: | chr29:45005652-45005493 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 135, 36 |
Conread position: | 492-657 |
Cow position: | chr29:8926486-8926322 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 492-681 |
Cow position: | chr29:11527815-11527633 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 140 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 6, 63 |
Conread position: | 492-707 |
Cow position: | chr29:683515-683298 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 58, 108 |
Conread position: | 493-630 |
Cow position: | chr29:742673-742536 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 493-647 |
Cow position: | chr29:21666063-21666217 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 493-661 |
Cow position: | chr29:23220523-23220357 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 494-628 |
Cow position: | chr29:29308595-29308460 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 496-619 |
Cow position: | chr29:18012537-18012660 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 496-627 |
Cow position: | chr29:4002870-4003002 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 111 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 497-628 |
Cow position: | chr29:7290756-7290887 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 497-628 |
Cow position: | chr29:23825230-23825099 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 497-645 |
Cow position: | chr29:39038289-39038140 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 498-622 |
Cow position: | chr29:22162268-22162144 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 106 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 501-629 |
Cow position: | chr29:39111327-39111203 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 501-665 |
Cow position: | chr29:40873995-40874157 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 502-622 |
Cow position: | chr29:17154764-17154883 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 502-656 |
Cow position: | chr29:13639382-13639230 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 93 |
Conread position: | 502-708 |
Cow position: | chr29:13867225-13867018 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 503-623 |
Cow position: | chr29:29923587-29923468 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 100 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 503-628 |
Cow position: | chr29:26756685-26756561 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 98 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 27, 106 |
Conread position: | 504-628 |
Cow position: | chr29:36781317-36781193 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 506-621 |
Cow position: | chr29:19363700-19363814 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 525-660 |
Cow position: | chr29:25288915-25288787 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 525-680 |
Cow position: | chr29:43096782-43096931 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 527-706 |
Cow position: | chr29:17022160-17022341 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 537-661 |
Cow position: | chr29:35071064-35070941 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 562-708 |
Cow position: | chr29:6034096-6033952 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 109 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 129, 68 |
Show alignments to all cow chromosomes.