Cow genome map
| Conread name: | Ss1.1-Pig1-3A18.5 |
| Conread position: | 371-647 |
| Cow position: | chrX:34532393-34532679 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 435-630 |
| Cow position: | chrX:37574775-37574982 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 438-649 |
| Cow position: | chrX:22482751-22482530 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 136 |
| Conread position: | 438-653 |
| Cow position: | chrX:31294628-31294408 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 58, 209 |
| Conread position: | 440-622 |
| Cow position: | chrX:37232351-37232541 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 444-619 |
| Cow position: | chrX:11851728-11851548 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 151 |
| Conread position: | 444-628 |
| Cow position: | chrX:9252221-9252023 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 444-652 |
| Cow position: | chrX:42381161-42380948 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 184 |
| Conread position: | 445-621 |
| Cow position: | chrX:29229952-29230132 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 445-623 |
| Cow position: | chrX:41862328-41862498 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 445-625 |
| Cow position: | chrX:34376902-34377079 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 445-626 |
| Cow position: | chrX:34313971-34314162 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 445-628 |
| Cow position: | chrX:11656034-11656221 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 445-628 |
| Cow position: | chrX:34792366-34792173 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 445-641 |
| Cow position: | chrX:34837114-34836910 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 445-645 |
| Cow position: | chrX:24424446-24424245 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 178 |
| Conread position: | 445-646 |
| Cow position: | chrX:27145565-27145761 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 445-647 |
| Cow position: | chrX:10252239-10252041 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 445-647 |
| Cow position: | chrX:13647843-13647623 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 445-647 |
| Cow position: | chrX:42927877-42927666 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 195 |
| Conread position: | 445-652 |
| Cow position: | chrX:4632907-4632692 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 445-653 |
| Cow position: | chrX:5017472-5017257 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 445-669 |
| Cow position: | chrX:27394078-27393846 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 445-678 |
| Cow position: | chrX:35387960-35387738 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 445-707 |
| Cow position: | chrX:11085114-11084849 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 43, 137 |
| Conread position: | 447-628 |
| Cow position: | chrX:38006820-38006631 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 180 |
| Conread position: | 447-652 |
| Cow position: | chrX:4996542-4996750 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 450-628 |
| Cow position: | chrX:25328659-25328475 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 451-653 |
| Cow position: | chrX:13177520-13177312 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 452-630 |
| Cow position: | chrX:33539122-33539313 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 455-652 |
| Cow position: | chrX:20957200-20957401 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 37, 180 |
| Conread position: | 456-680 |
| Cow position: | chrX:38227140-38226918 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 457-621 |
| Cow position: | chrX:11938966-11938801 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 473-628 |
| Cow position: | chrX:40035455-40035300 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 478-629 |
| Cow position: | chrX:619011-618868 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 478-659 |
| Cow position: | chrX:44926443-44926627 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 480-625 |
| Cow position: | chrX:22115324-22115180 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 480-627 |
| Cow position: | chrX:21986300-21986152 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 480-628 |
| Cow position: | chrX:16836294-16836149 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 480-628 |
| Cow position: | chrX:26881574-26881424 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 480-628 |
| Cow position: | chrX:41192697-41192844 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 480-629 |
| Cow position: | chrX:18273063-18272917 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 69 |
| Conread position: | 480-651 |
| Cow position: | chrX:12972673-12972847 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 482-619 |
| Cow position: | chrX:42469948-42469810 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 485-628 |
| Cow position: | chrX:29501885-29501744 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 488-644 |
| Cow position: | chrX:6544253-6544407 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 488-653 |
| Cow position: | chrX:5118502-5118337 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 139 |
| Conread position: | 489-623 |
| Cow position: | chrX:12082323-12082189 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 489-627 |
| Cow position: | chrX:9635190-9635052 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 489-628 |
| Cow position: | chrX:37072391-37072529 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 489-647 |
| Cow position: | chrX:34505048-34504892 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 114 |
| Conread position: | 489-665 |
| Cow position: | chrX:32623572-32623750 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 120 |
| Conread position: | 489-679 |
| Cow position: | chrX:42235523-42235331 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 490-622 |
| Cow position: | chrX:35224299-35224431 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 130, 8 |
| Conread position: | 490-652 |
| Cow position: | chrX:28940248-28940406 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 490-653 |
| Cow position: | chrX:47345329-47345491 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 135 |
| Conread position: | 490-682 |
| Cow position: | chrX:6690258-6690068 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 491-615 |
| Cow position: | chrX:7571908-7572033 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 120 |
| Conread position: | 491-616 |
| Cow position: | chrX:29585122-29585247 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-620 |
| Cow position: | chrX:45383042-45382914 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 491-622 |
| Cow position: | chrX:46070169-46070034 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 491-623 |
| Cow position: | chrX:27431915-27431783 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-627 |
| Cow position: | chrX:11073188-11073052 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-627 |
| Cow position: | chrX:19943231-19943097 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 491-627 |
| Cow position: | chrX:38642252-38642388 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-627 |
| Cow position: | chrX:42479836-42479972 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:16984644-16984780 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:32208819-32208683 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:34411849-34411986 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:39290362-39290497 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:41871070-41871207 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:43115154-43115290 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 491-628 |
| Cow position: | chrX:45846105-45846241 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 491-629 |
| Cow position: | chrX:4289445-4289585 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 491-629 |
| Cow position: | chrX:19273704-19273566 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-629 |
| Cow position: | chrX:19394556-19394697 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 491-630 |
| Cow position: | chrX:4466970-4467109 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-644 |
| Cow position: | chrX:5919495-5919652 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 491-645 |
| Cow position: | chrX:2935960-2936114 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-646 |
| Cow position: | chrX:14275740-14275586 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 491-646 |
| Cow position: | chrX:31436477-31436631 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 491-647 |
| Cow position: | chrX:1466165-1466321 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 491-647 |
| Cow position: | chrX:6599779-6599624 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 491-647 |
| Cow position: | chrX:22074798-22074958 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 491-647 |
| Cow position: | chrX:22392981-22392827 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 491-652 |
| Cow position: | chrX:24749091-24749251 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 491-657 |
| Cow position: | chrX:169542-169380 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 491-659 |
| Cow position: | chrX:12979831-12979666 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 491-661 |
| Cow position: | chrX:38853201-38853372 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 132, 65 |
| Conread position: | 491-665 |
| Cow position: | chrX:41884409-41884232 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 491-672 |
| Cow position: | chrX:36848575-36848396 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 491-678 |
| Cow position: | chrX:43730220-43730035 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 491-679 |
| Cow position: | chrX:17725978-17726166 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 127, 141 |
| Conread position: | 491-679 |
| Cow position: | chrX:20743607-20743797 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 492-622 |
| Cow position: | chrX:2523678-2523548 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-625 |
| Cow position: | chrX:20584332-20584465 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-628 |
| Cow position: | chrX:9201552-9201688 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-628 |
| Cow position: | chrX:27306458-27306594 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-629 |
| Cow position: | chrX:45430018-45429881 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-629 |
| Cow position: | chrX:46429815-46429678 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 492-646 |
| Cow position: | chrX:27668954-27668799 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 492-653 |
| Cow position: | chrX:32943072-32942914 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 492-653 |
| Cow position: | chrX:35985824-35985981 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 492-666 |
| Cow position: | chrX:6414051-6414219 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 138, 56 |
| Conread position: | 492-668 |
| Cow position: | chrX:40269495-40269671 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 139 |
| Conread position: | 492-668 |
| Cow position: | chrX:40532039-40531864 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 492-672 |
| Cow position: | chrX:40557675-40557496 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 492-685 |
| Cow position: | chrX:37781105-37780913 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 180, 172 |
| Conread position: | 493-608 |
| Cow position: | chrX:47362618-47362503 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-627 |
| Cow position: | chrX:40685323-40685189 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-628 |
| Cow position: | chrX:45174855-45174990 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 493-629 |
| Cow position: | chrX:14883951-14883814 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 493-652 |
| Cow position: | chrX:42836186-42836343 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 493-653 |
| Cow position: | chrX:8869397-8869235 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 493-707 |
| Cow position: | chrX:616254-616049 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 495-629 |
| Cow position: | chrX:11326090-11325957 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 496-627 |
| Cow position: | chrX:4616003-4615872 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 108 |
| Conread position: | 496-628 |
| Cow position: | chrX:29050258-29050388 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 118, 58 |
| Conread position: | 496-679 |
| Cow position: | chrX:36068023-36068203 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 497-616 |
| Cow position: | chrX:19469497-19469378 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 497-628 |
| Cow position: | chrX:4153022-4152891 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 497-628 |
| Cow position: | chrX:5135514-5135380 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 125 |
| Conread position: | 497-628 |
| Cow position: | chrX:12437261-12437132 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 497-652 |
| Cow position: | chrX:45670230-45670387 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 497-708 |
| Cow position: | chrX:878371-878159 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 133, 174 |
| Conread position: | 497-708 |
| Cow position: | chrX:31312038-31312247 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 194, 133 |
| Conread position: | 497-721 |
| Cow position: | chrX:33493788-33494002 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 499-628 |
| Cow position: | chrX:29467767-29467638 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 500-628 |
| Cow position: | chrX:17794993-17795121 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 500-628 |
| Cow position: | chrX:33855208-33855080 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 500-670 |
| Cow position: | chrX:41270974-41270805 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 501-681 |
| Cow position: | chrX:29680247-29680071 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 502-644 |
| Cow position: | chrX:29553299-29553441 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 502-672 |
| Cow position: | chrX:23562646-23562816 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 128 |
| Conread position: | 503-700 |
| Cow position: | chrX:37129284-37129479 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 100 |
| Conread position: | 504-628 |
| Cow position: | chrX:20583682-20583806 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 504-629 |
| Cow position: | chrX:41164630-41164752 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 506-679 |
| Cow position: | chrX:28098344-28098518 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 506-708 |
| Cow position: | chrX:34508562-34508751 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 507-629 |
| Cow position: | chrX:5026275-5026397 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 508-620 |
| Cow position: | chrX:20340623-20340511 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 510-619 |
| Cow position: | chrX:4617376-4617267 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 513-628 |
| Cow position: | chrX:32866900-32867015 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-628 |
| Cow position: | chrX:23359085-23358974 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 518-630 |
| Cow position: | chrX:4942228-4942115 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 518-708 |
| Cow position: | chrX:41939853-41940040 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 179, 113 |
| Conread position: | 525-628 |
| Cow position: | chrX:34991401-34991504 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 526-668 |
| Cow position: | chrX:40452046-40451906 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 526-679 |
| Cow position: | chrX:41744352-41744500 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 529-662 |
| Cow position: | chrX:31983544-31983412 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 542-678 |
| Cow position: | chrX:27189226-27189358 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.