Cow genome map
| Conread name: | Ss1.1-Pig1-45J06.5 |
| Conread position: | 104-222 |
| Cow position: | chrX:13793034-13793152 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-600 |
| Cow position: | chrX:18899160-18899422 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 350-537 |
| Cow position: | chrX:509434-509624 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 351-598 |
| Cow position: | chrX:13667295-13667536 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 166 |
| Conread position: | 351-600 |
| Cow position: | chrX:1013741-1013486 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 137 |
| Conread position: | 351-600 |
| Cow position: | chrX:4480055-4479800 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 351-600 |
| Cow position: | chrX:26341546-26341797 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 148 |
| Conread position: | 354-598 |
| Cow position: | chrX:2607070-2606824 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 62, 173 |
| Conread position: | 355-574 |
| Cow position: | chrX:13801037-13801252 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 54 |
| Conread position: | 355-598 |
| Cow position: | chrX:387786-387538 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 355-600 |
| Cow position: | chrX:3122742-3122991 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 355-600 |
| Cow position: | chrX:24995955-24996204 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 356-600 |
| Cow position: | chrX:18920292-18920042 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 357-536 |
| Cow position: | chrX:18686195-18686015 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 357-598 |
| Cow position: | chrX:20589318-20589070 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 361-600 |
| Cow position: | chrX:16523004-16522766 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 363-599 |
| Cow position: | chrX:22331129-22331372 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 371-600 |
| Cow position: | chrX:41687247-41687012 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.