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Cow genome map

           
Conread name:
           
Ss1.1-Pig1-46K21.5
        

               
Conread position:
               
10-475
               

               
Cow position:
               
chr10:51288969-51289420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
14-301
               

               
Cow position:
               
chr10:34554370-34554096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
164, 14
               

               
Conread position:
               
14-355
               

               
Cow position:
               
chr10:58259797-58259473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
272, 14
               

               
Conread position:
               
14-385
               

               
Cow position:
               
chr10:53935022-53934670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
195, 21
               

               
Conread position:
               
14-485
               

               
Cow position:
               
chr10:30352562-30353036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 14
               

               
Conread position:
               
14-488
               

               
Cow position:
               
chr10:6489584-6490069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 14
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chr10:22048973-22049237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
19-341
               

               
Cow position:
               
chr10:14098599-14098295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
20-466
               

               
Cow position:
               
chr10:6505085-6505519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 8
               

               
Conread position:
               
20-475
               

               
Cow position:
               
chr10:64286072-64285623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
252, 9
               

               
Conread position:
               
21-208
               

               
Cow position:
               
chr10:48377923-48377734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
24-341
               

               
Cow position:
               
chr10:29816317-29816640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
25-408
               

               
Cow position:
               
chr10:26209533-26209141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
25-479
               

               
Cow position:
               
chr10:37529541-37529094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 10
               

               
Conread position:
               
25-482
               

               
Cow position:
               
chr10:15867964-15868438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
168, 10
               

               
Conread position:
               
26-341
               

               
Cow position:
               
chr10:22520436-22520124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 9
               

               
Conread position:
               
26-362
               

               
Cow position:
               
chr10:20897032-20897346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
26-460
               

               
Cow position:
               
chr10:56828591-56828159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 9
               

               
Conread position:
               
28-347
               

               
Cow position:
               
chr10:804926-805234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
28-355
               

               
Cow position:
               
chr10:8413319-8413000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
219, 7
               

               
Conread position:
               
28-360
               

               
Cow position:
               
chr10:30360261-30360575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
221, 7
               

               
Conread position:
               
28-463
               

               
Cow position:
               
chr10:21422424-21422001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
28-463
               

               
Cow position:
               
chr10:48257553-48257112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
34-258
               

               
Cow position:
               
chr10:22786637-22786848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
34-382
               

               
Cow position:
               
chr10:35753225-35752883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 154
               

               
Conread position:
               
34-489
               

               
Cow position:
               
chr10:35901072-35901513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
34-500
               

               
Cow position:
               
chr10:45337401-45337883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
210, 80
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr10:35715973-35715807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr10:57457069-57457242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr10:8923672-8923878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
35-257
               

               
Cow position:
               
chr10:35026217-35026430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
35-258
               

               
Cow position:
               
chr10:67716721-67716943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
35-311
               

               
Cow position:
               
chr10:6516449-6516174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 169
               

               
Conread position:
               
35-320
               

               
Cow position:
               
chr10:58556932-58557206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
35-322
               

               
Cow position:
               
chr10:6173094-6173376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
35-339
               

               
Cow position:
               
chr10:43451182-43450892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
174, 137
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr10:38725397-38725697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr10:43288132-43287830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr10:21424947-21424623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 73
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr10:59152126-59151808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 64
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr10:23936221-23936534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
251, 8
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr10:28105335-28105022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
206, 76
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr10:59839548-59839230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
35-383
               

               
Cow position:
               
chr10:13311469-13311813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
225, 134
               

               
Conread position:
               
35-444
               

               
Cow position:
               
chr10:35802632-35802216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
35-451
               

               
Cow position:
               
chr10:24096642-24096217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
175, 132
               

               
Conread position:
               
35-456
               

               
Cow position:
               
chr10:5502761-5503179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
246, 137
               

               
Conread position:
               
35-456
               

               
Cow position:
               
chr10:58718389-58718810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
35-460
               

               
Cow position:
               
chr10:30460382-30460829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-463
               

               
Cow position:
               
chr10:53674560-53674991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 104
               

               
Conread position:
               
35-466
               

               
Cow position:
               
chr10:40421108-40420688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 161
               

               
Conread position:
               
35-470
               

               
Cow position:
               
chr10:9576302-9575878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 100
               

               
Conread position:
               
35-470
               

               
Cow position:
               
chr10:39387196-39387619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr10:1976583-1976143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr10:3998642-3999066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
206, 96
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr10:31401161-31400723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 168
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr10:41397217-41397651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 83
               

               
Conread position:
               
35-478
               

               
Cow position:
               
chr10:54848515-54848957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 50
               

               
Conread position:
               
35-482
               

               
Cow position:
               
chr10:35905093-35904660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
35-483
               

               
Cow position:
               
chr10:34607295-34607747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
218, 136
               

               
Conread position:
               
35-484
               

               
Cow position:
               
chr10:34655374-34654926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 67
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr10:24870902-24871357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr10:42312645-42313092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
249, 94
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr10:62353203-62353646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 71
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr10:8093578-8093139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr10:69935040-69934597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 72
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr10:52569332-52569784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
35-490
               

               
Cow position:
               
chr10:39398781-39398327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 153
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr10:13368088-13368549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-496
               

               
Cow position:
               
chr10:48255486-48255044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-498
               

               
Cow position:
               
chr10:67443368-67442923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr10:31466481-31466944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
248, 137
               

               
Conread position:
               
35-526
               

               
Cow position:
               
chr10:37287440-37286947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
207, 137
               

               
Conread position:
               
35-531
               

               
Cow position:
               
chr10:18041922-18042421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
251, 81
               

               
Conread position:
               
36-272
               

               
Cow position:
               
chr10:37822991-37822756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
36-346
               

               
Cow position:
               
chr10:44817521-44817816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 80
               

               
Conread position:
               
36-470
               

               
Cow position:
               
chr10:35862492-35862061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 170
               

               
Conread position:
               
37-485
               

               
Cow position:
               
chr10:13586453-13586889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
250, 70
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr10:35857313-35857141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
39-248
               

               
Cow position:
               
chr10:888667-888867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
39-313
               

               
Cow position:
               
chr10:41941839-41941566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
205, 171
               

               
Conread position:
               
39-332
               

               
Cow position:
               
chr10:50609278-50609571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
39-360
               

               
Cow position:
               
chr10:2449094-2449407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
39-361
               

               
Cow position:
               
chr10:15318629-15318943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
202, 75
               

               
Conread position:
               
39-417
               

               
Cow position:
               
chr10:24133079-24132709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
221, 50
               

               
Conread position:
               
39-466
               

               
Cow position:
               
chr10:52296238-52296663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 161
               

               
Conread position:
               
39-486
               

               
Cow position:
               
chr10:2974347-2973885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 156
               

               
Conread position:
               
39-489
               

               
Cow position:
               
chr10:15818055-15817606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 166
               

               
Conread position:
               
39-490
               

               
Cow position:
               
chr10:38370721-38370260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
170, 242
               

               
Conread position:
               
39-491
               

               
Cow position:
               
chr10:35791674-35792117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 77
               

               
Conread position:
               
39-492
               

               
Cow position:
               
chr10:59571639-59572083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 164
               

               
Conread position:
               
39-504
               

               
Cow position:
               
chr10:46150626-46151078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
40-408
               

               
Cow position:
               
chr10:20132785-20132422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
42-252
               

               
Cow position:
               
chr10:32174476-32174679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
43-507
               

               
Cow position:
               
chr10:62316310-62316778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
8, 128
               

               
Conread position:
               
44-456
               

               
Cow position:
               
chr10:7367043-7366635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 161
               

               
Conread position:
               
45-208
               

               
Cow position:
               
chr10:24871632-24871795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
45-475
               

               
Cow position:
               
chr10:21657167-21657588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
45-477
               

               
Cow position:
               
chr10:20552930-20553357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 6
               

               
Conread position:
               
45-477
               

               
Cow position:
               
chr10:22390336-22390775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
45-485
               

               
Cow position:
               
chr10:10048428-10048862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
45-487
               

               
Cow position:
               
chr10:64041828-64042272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
45-499
               

               
Cow position:
               
chr10:31027897-31027441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 58
               

               
Conread position:
               
46-383
               

               
Cow position:
               
chr10:22321267-22321603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
117, 166
               

               
Conread position:
               
46-408
               

               
Cow position:
               
chr10:51696500-51696847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
46-479
               

               
Cow position:
               
chr10:14817417-14816979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
102, 165
               

               
Conread position:
               
47-488
               

               
Cow position:
               
chr10:28840701-28841142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
48-500
               

               
Cow position:
               
chr10:27717091-27716638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
53-471
               

               
Cow position:
               
chr10:37415541-37415954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 11
               

               
Conread position:
               
56-383
               

               
Cow position:
               
chr10:53357657-53357976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
229, 15
               

               
Conread position:
               
56-484
               

               
Cow position:
               
chr10:22616885-22616455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
58-208
               

               
Cow position:
               
chr10:22652456-22652607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
61-346
               

               
Cow position:
               
chr10:29211721-29211992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
258, 111
               

               
Conread position:
               
63-184
               

               
Cow position:
               
chr10:39123936-39123815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-201
               

               
Cow position:
               
chr10:5113351-5113490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
63-201
               

               
Cow position:
               
chr10:26608123-26607985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr10:9586752-9586611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr10:29628185-29628043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr10:55580498-55580357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr10:20811940-20812092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
63-221
               

               
Cow position:
               
chr10:69033767-69033615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
63-228
               

               
Cow position:
               
chr10:23500451-23500282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
63-249
               

               
Cow position:
               
chr10:57736399-57736219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
63-257
               

               
Cow position:
               
chr10:9445248-9445063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr10:37528840-37528632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
63-284
               

               
Cow position:
               
chr10:24971834-24971633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
200, 43
               

               
Conread position:
               
63-311
               

               
Cow position:
               
chr10:60032812-60032563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
63-344
               

               
Cow position:
               
chr10:13163682-13163408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
63-345
               

               
Cow position:
               
chr10:15293037-15293307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
221, 8
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr10:29360673-29360961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr10:36001968-36002240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
221, 48
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr10:66211533-66211248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr10:1427805-1428083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
191, 127
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr10:45769805-45770091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
189, 56
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr10:15462264-15462543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
186, 40
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr10:44783106-44783398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr10:24548023-24548306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 50
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr10:21462006-21462300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
63-365
               

               
Cow position:
               
chr10:10963752-10964050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
196, 83
               

               
Conread position:
               
63-383
               

               
Cow position:
               
chr10:29589075-29588762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 61
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr10:37668395-37668068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
63-403
               

               
Cow position:
               
chr10:6529964-6530288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
63-403
               

               
Cow position:
               
chr10:10134743-10135089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
63-404
               

               
Cow position:
               
chr10:29279207-29279546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
178, 55
               

               
Conread position:
               
63-405
               

               
Cow position:
               
chr10:39875380-39875051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
63-406
               

               
Cow position:
               
chr10:52046628-52046974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr10:77155-77475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
224, 48
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr10:11212877-11213218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 142
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr10:11247738-11248085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
209, 133
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr10:34175231-34174873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
184, 54
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr10:29251927-29252270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 138
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr10:52113900-52113567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
209, 47
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr10:60960705-60961039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
63-419
               

               
Cow position:
               
chr10:53973609-53973957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
223, 142
               

               
Conread position:
               
63-451
               

               
Cow position:
               
chr10:38942191-38942587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
63-454
               

               
Cow position:
               
chr10:32503215-32503586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
63-458
               

               
Cow position:
               
chr10:10720911-10720513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 142
               

               
Conread position:
               
63-466
               

               
Cow position:
               
chr10:42745678-42746077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
63-466
               

               
Cow position:
               
chr10:54730776-54731191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 152
               

               
Conread position:
               
63-469
               

               
Cow position:
               
chr10:35868236-35867847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
224, 90
               

               
Conread position:
               
63-470
               

               
Cow position:
               
chr10:5543484-5543078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
63-470
               

               
Cow position:
               
chr10:28152618-28152225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
186, 142
               

               
Conread position:
               
63-472
               

               
Cow position:
               
chr10:10985730-10985339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
63-472
               

               
Cow position:
               
chr10:30224448-30224844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 135
               

               
Conread position:
               
63-473
               

               
Cow position:
               
chr10:23506720-23506315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
186, 68
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr10:23576308-23576715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr10:47773499-47773895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 36
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr10:20095519-20095943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 147
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr10:37512483-37512064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr10:63276156-63276565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
63-476
               

               
Cow position:
               
chr10:1978898-1978495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 98
               

               
Conread position:
               
63-477
               

               
Cow position:
               
chr10:57786102-57786514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
63-478
               

               
Cow position:
               
chr10:40164164-40163755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
185, 32
               

               
Conread position:
               
63-479
               

               
Cow position:
               
chr10:35731761-35731348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 142
               

               
Conread position:
               
63-481
               

               
Cow position:
               
chr10:22528136-22527738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 66
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr10:10124110-10124508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
217, 51
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr10:50559162-50558748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr10:55733834-55733427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 26
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr10:60237350-60236916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 165
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr10:67627222-67626820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr10:10752215-10751804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr10:19895164-19895577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 53
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr10:54504367-54504787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 147
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr10:19104411-19103997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
98, 143
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr10:49169292-49168845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 384
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr10:721064-721476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
186, 57
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr10:8403974-8404393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 149
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr10:23056317-23055907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 147
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr10:63940540-63940958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr10:5890005-5889570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr10:50183282-50182864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
63-491
               

               
Cow position:
               
chr10:24561222-24560792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
63-491
               

               
Cow position:
               
chr10:28176628-28176209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
183, 147
               

               
Conread position:
               
63-491
               

               
Cow position:
               
chr10:36489784-36490209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr10:37235788-37235358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 147
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr10:37818795-37818362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 140
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr10:61588496-61588066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
63-493
               

               
Cow position:
               
chr10:51944127-51944552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
63-495
               

               
Cow position:
               
chr10:6852037-6852461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
239, 43
               

               
Conread position:
               
63-495
               

               
Cow position:
               
chr10:56732811-56733224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr10:16414821-16414375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
188, 75
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr10:24752921-24753335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
221, 45
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr10:11967080-11966648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 103
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr10:16740292-16739873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr10:50390547-50390966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
63-501
               

               
Cow position:
               
chr10:61510957-61511385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
218, 45
               

               
Conread position:
               
63-502
               

               
Cow position:
               
chr10:11080723-11081173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 140
               

               
Conread position:
               
63-507
               

               
Cow position:
               
chr10:35820851-35820410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
110, 151
               

               
Conread position:
               
63-512
               

               
Cow position:
               
chr10:6719667-6720116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
188, 49
               

               
Conread position:
               
63-518
               

               
Cow position:
               
chr10:34661552-34661112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 147
               

               
Conread position:
               
63-519
               

               
Cow position:
               
chr10:33215562-33216012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
63-523
               

               
Cow position:
               
chr10:56080409-56079938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
63-531
               

               
Cow position:
               
chr10:24732075-24732531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
221, 143
               

               
Conread position:
               
64-200
               

               
Cow position:
               
chr10:25475345-25475481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-208
               

               
Cow position:
               
chr10:30746171-30746307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
64-251
               

               
Cow position:
               
chr10:54936346-54936165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 51
               

               
Conread position:
               
64-256
               

               
Cow position:
               
chr10:18229955-18229765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 141
               

               
Conread position:
               
64-282
               

               
Cow position:
               
chr10:20446866-20447072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
64-295
               

               
Cow position:
               
chr10:19678634-19678863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
185, 146
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr10:1749341-1749628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 148
               

               
Conread position:
               
64-355
               

               
Cow position:
               
chr10:41803130-41802848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
222, 60
               

               
Conread position:
               
64-365
               

               
Cow position:
               
chr10:22472081-22472387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 191
               

               
Conread position:
               
64-444
               

               
Cow position:
               
chr10:52278493-52278869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 141
               

               
Conread position:
               
64-460
               

               
Cow position:
               
chr10:13391287-13390905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 141
               

               
Conread position:
               
64-474
               

               
Cow position:
               
chr10:14947033-14947428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
64-475
               

               
Cow position:
               
chr10:45379242-45378825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
64-484
               

               
Cow position:
               
chr10:5151117-5151537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
185, 47
               

               
Conread position:
               
64-484
               

               
Cow position:
               
chr10:16598455-16598875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
64-484
               

               
Cow position:
               
chr10:49923589-49923180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
240, 105
               

               
Conread position:
               
64-490
               

               
Cow position:
               
chr10:31362444-31362032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
64-491
               

               
Cow position:
               
chr10:66127624-66128043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 147
               

               
Conread position:
               
64-499
               

               
Cow position:
               
chr10:33665606-33666042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
64-520
               

               
Cow position:
               
chr10:48317190-48316725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
64-531
               

               
Cow position:
               
chr10:20372365-20371903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
97, 148
               

               
Conread position:
               
65-172
               

               
Cow position:
               
chr10:69998181-69998074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-194
               

               
Cow position:
               
chr10:49948306-49948177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
65-365
               

               
Cow position:
               
chr10:38014140-38014429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
179, 46
               

               
Conread position:
               
65-383
               

               
Cow position:
               
chr10:24763246-24763563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
185, 66
               

               
Conread position:
               
65-394
               

               
Cow position:
               
chr10:59675487-59675163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
110, 116
               

               
Conread position:
               
65-406
               

               
Cow position:
               
chr10:15115382-15115719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
188, 73
               

               
Conread position:
               
65-466
               

               
Cow position:
               
chr10:48462571-48462180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
65-475
               

               
Cow position:
               
chr10:13765397-13764988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 46
               

               
Conread position:
               
65-478
               

               
Cow position:
               
chr10:37709270-37708847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
169, 96
               

               
Conread position:
               
65-483
               

               
Cow position:
               
chr10:57034023-57033614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
65-484
               

               
Cow position:
               
chr10:29166045-29166464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
65-492
               

               
Cow position:
               
chr10:16645427-16644995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
65-499
               

               
Cow position:
               
chr10:51306093-51306534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 216
               

               
Conread position:
               
66-394
               

               
Cow position:
               
chr10:51862300-51861987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr10:8934255-8934565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
220, 51
               

               
Conread position:
               
66-465
               

               
Cow position:
               
chr10:57142444-57142038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
66-473
               

               
Cow position:
               
chr10:6435827-6436231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
66-490
               

               
Cow position:
               
chr10:45370823-45371249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 50
               

               
Conread position:
               
66-509
               

               
Cow position:
               
chr10:10468746-10469174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
67-346
               

               
Cow position:
               
chr10:8923043-8923322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 138
               

               
Conread position:
               
67-360
               

               
Cow position:
               
chr10:9341968-9341680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
67-360
               

               
Cow position:
               
chr10:24785874-24786163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
67-407
               

               
Cow position:
               
chr10:24375319-24375649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
67-483
               

               
Cow position:
               
chr10:22341334-22341757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
67-493
               

               
Cow position:
               
chr10:62286320-62286760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
69-242
               

               
Cow position:
               
chr10:15874668-15874501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
104, 137
               

               
Conread position:
               
70-407
               

               
Cow position:
               
chr10:33067796-33067471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
71-257
               

               
Cow position:
               
chr10:18154059-18153875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 134
               

               
Conread position:
               
71-347
               

               
Cow position:
               
chr10:29069931-29070200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
138, 97
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr10:47412335-47412049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
177, 134
               

               
Conread position:
               
71-432
               

               
Cow position:
               
chr10:6665773-6665433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr10:22509412-22508980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
71-509
               

               
Cow position:
               
chr10:37014409-37014850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
155, 45
               

               
Conread position:
               
72-355
               

               
Cow position:
               
chr10:46493229-46492943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
72-358
               

               
Cow position:
               
chr10:24744322-24744600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
73-484
               

               
Cow position:
               
chr10:10148425-10148835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 133
               

               
Conread position:
               
74-257
               

               
Cow position:
               
chr10:33733093-33732915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
74-454
               

               
Cow position:
               
chr10:66194528-66194147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
75-492
               

               
Cow position:
               
chr10:57059508-57059084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
75-502
               

               
Cow position:
               
chr10:7816885-7817324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
76-386
               

               
Cow position:
               
chr10:3362397-3362710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
196, 113
               

               
Conread position:
               
76-484
               

               
Cow position:
               
chr10:1996887-1996488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 129
               

               
Conread position:
               
77-480
               

               
Cow position:
               
chr10:35246164-35245772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
210, 132
               

               
Conread position:
               
81-475
               

               
Cow position:
               
chr10:17836732-17837129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
82-492
               

               
Cow position:
               
chr10:45476434-45476026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr10:59164311-59164051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
83-486
               

               
Cow position:
               
chr10:45871298-45871705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 130
               

               
Conread position:
               
85-473
               

               
Cow position:
               
chr10:17022770-17022395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
176, 55
               

               
Conread position:
               
91-346
               

               
Cow position:
               
chr10:45678806-45679060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
91-347
               

               
Cow position:
               
chr10:39304059-39303803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
157, 17
               

               
Conread position:
               
93-486
               

               
Cow position:
               
chr10:24276940-24276543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
97-347
               

               
Cow position:
               
chr10:65424102-65423860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
97-403
               

               
Cow position:
               
chr10:35779106-35778800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
152, 108
               

               
Conread position:
               
97-478
               

               
Cow position:
               
chr10:12486066-12486423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 21
               

               
Conread position:
               
99-484
               

               
Cow position:
               
chr10:10119996-10120374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
102-484
               

               
Cow position:
               
chr10:69564406-69564791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
103-354
               

               
Cow position:
               
chr10:24780989-24781239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
103-474
               

               
Cow position:
               
chr10:17073557-17073192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
146, 102
               

               
Conread position:
               
103-499
               

               
Cow position:
               
chr10:9675656-9675274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
183, 107
               

               
Conread position:
               
108-407
               

               
Cow position:
               
chr10:22396058-22396356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 101
               

               
Conread position:
               
108-466
               

               
Cow position:
               
chr10:19372527-19372168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
109-360
               

               
Cow position:
               
chr10:54469586-54469337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 65
               

               
Conread position:
               
110-485
               

               
Cow position:
               
chr10:2613175-2613551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
110-497
               

               
Cow position:
               
chr10:4148288-4148696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
112-485
               

               
Cow position:
               
chr10:49146334-49146693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
113-483
               

               
Cow position:
               
chr10:747276-747655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
114-500
               

               
Cow position:
               
chr10:57461169-57461557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
115-402
               

               
Cow position:
               
chr10:15872058-15871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
115-492
               

               
Cow position:
               
chr10:11463853-11463465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
116-460
               

               
Cow position:
               
chr10:21082199-21082533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
168, 94
               

               
Conread position:
               
116-466
               

               
Cow position:
               
chr10:30523252-30522897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
116-484
               

               
Cow position:
               
chr10:52695914-52695544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 89
               

               
Conread position:
               
116-490
               

               
Cow position:
               
chr10:4184006-4184395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr10:46195597-46195977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 92
               

               
Conread position:
               
117-386
               

               
Cow position:
               
chr10:48573876-48573596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
117-498
               

               
Cow position:
               
chr10:24756232-24756608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 88
               

               
Conread position:
               
117-498
               

               
Cow position:
               
chr10:45657960-45658344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
118-404
               

               
Cow position:
               
chr10:27828147-27828422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
168, 43
               

               
Conread position:
               
118-408
               

               
Cow position:
               
chr10:28776171-28776457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 17
               

               
Conread position:
               
118-446
               

               
Cow position:
               
chr10:28395483-28395159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
122-407
               

               
Cow position:
               
chr10:39227966-39228253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
125-444
               

               
Cow position:
               
chr10:37295839-37295526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 27
               

               
Conread position:
               
128-395
               

               
Cow position:
               
chr10:55622019-55621761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
134-470
               

               
Cow position:
               
chr10:38376819-38376504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
135-483
               

               
Cow position:
               
chr10:9656707-9656342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 360
               

               
Conread position:
               
140-292
               

               
Cow position:
               
chr10:56392437-56392292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
142-403
               

               
Cow position:
               
chr10:6543563-6543826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
150-532
               

               
Cow position:
               
chr10:21923672-21923287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
151-493
               

               
Cow position:
               
chr10:61922289-61921947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
151-501
               

               
Cow position:
               
chr10:6384385-6384730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
161-365
               

               
Cow position:
               
chr10:69997943-69997738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
161-487
               

               
Cow position:
               
chr10:58451512-58451191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
166-474
               

               
Cow position:
               
chr10:37068548-37068246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
172-486
               

               
Cow position:
               
chr10:34673891-34674200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
177-436
               

               
Cow position:
               
chr10:10750377-10750109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
177-477
               

               
Cow position:
               
chr10:46327564-46327867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
177-479
               

               
Cow position:
               
chr10:32973330-32973011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
177-483
               

               
Cow position:
               
chr10:7383735-7383433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
183-489
               

               
Cow position:
               
chr10:60446614-60446923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
185-490
               

               
Cow position:
               
chr10:39124013-39124327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
185-500
               

               
Cow position:
               
chr10:31005135-31004812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
190-474
               

               
Cow position:
               
chr10:61510057-61509772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
194-394
               

               
Cow position:
               
chr10:8449385-8449596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
205-486
               

               
Cow position:
               
chr10:48407033-48407321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 230
               

               
Conread position:
               
209-456
               

               
Cow position:
               
chr10:46575410-46575663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 220
               

               
Conread position:
               
209-466
               

               
Cow position:
               
chr10:30216805-30216550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
209-487
               

               
Cow position:
               
chr10:55396075-55395791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
209-492
               

               
Cow position:
               
chr10:36531829-36531530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
209-496
               

               
Cow position:
               
chr10:3275892-3276168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
210-482
               

               
Cow position:
               
chr10:3364281-3364003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 239
               

               
Conread position:
               
214-489
               

               
Cow position:
               
chr10:34646541-34646264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
214-492
               

               
Cow position:
               
chr10:60491351-60491069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
218-488
               

               
Cow position:
               
chr10:762824-763096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
219-482
               

               
Cow position:
               
chr10:23390404-23390132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
219-522
               

               
Cow position:
               
chr10:58044218-58043907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
220-482
               

               
Cow position:
               
chr10:43586374-43586102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
222-492
               

               
Cow position:
               
chr10:31803567-31803290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 200
               

               
Conread position:
               
228-558
               

               
Cow position:
               
chr10:19191682-19192017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
239-486
               

               
Cow position:
               
chr10:25822312-25822069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
244-478
               

               
Cow position:
               
chr10:32080213-32080446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
247-485
               

               
Cow position:
               
chr10:37426194-37425952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 197
               

               
Conread position:
               
261-472
               

               
Cow position:
               
chr10:55600202-55599981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
264-474
               

               
Cow position:
               
chr10:17149837-17150046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
271-471
               

               
Cow position:
               
chr10:2857012-2857219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
271-488
               

               
Cow position:
               
chr10:16830422-16830195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
271-491
               

               
Cow position:
               
chr10:38205746-38205526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr10:443549-443747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
272-491
               

               
Cow position:
               
chr10:11112589-11112811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 198
               

               
Conread position:
               
274-470
               

               
Cow position:
               
chr10:49634034-49634236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
276-499
               

               
Cow position:
               
chr10:27178465-27178686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
288-475
               

               
Cow position:
               
chr10:11047222-11047029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
288-482
               

               
Cow position:
               
chr10:59417253-59417055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
288-486
               

               
Cow position:
               
chr10:49862452-49862650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
288-529
               

               
Cow position:
               
chr10:24971344-24971097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
290-493
               

               
Cow position:
               
chr10:2985088-2984874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
291-475
               

               
Cow position:
               
chr10:49029642-49029824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
295-491
               

               
Cow position:
               
chr10:14188619-14188422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
92, 166
               

               
Conread position:
               
298-470
               

               
Cow position:
               
chr10:58149175-58148999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr10:10153004-10153198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
299-504
               

               
Cow position:
               
chr10:55069204-55069413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
305-491
               

               
Cow position:
               
chr10:40998858-40999049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr10:16641930-16641731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 178
               

               
Conread position:
               
308-486
               

               
Cow position:
               
chr10:18751471-18751287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
308-496
               

               
Cow position:
               
chr10:7089351-7089539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
309-485
               

               
Cow position:
               
chr10:3985895-3986076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
337-491
               

               
Cow position:
               
chr10:33694408-33694560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 61
               
Show alignments to all cow chromosomes.