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Cow genome map

           
Conread name:
           
Ss1.1-Pig1-46K21.5
        

               
Conread position:
               
10-407
               

               
Cow position:
               
chr13:23166850-23167245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
10-475
               

               
Cow position:
               
chr13:19882789-19883248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 17
               

               
Conread position:
               
11-463
               

               
Cow position:
               
chr13:12207290-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
14-485
               

               
Cow position:
               
chr13:60508873-60509348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
15-371
               

               
Cow position:
               
chr13:1042712-1043075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
20-408
               

               
Cow position:
               
chr13:56148776-56148376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
146, 8
               

               
Conread position:
               
20-408
               

               
Cow position:
               
chr13:56160191-56160591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
146, 8
               

               
Conread position:
               
28-474
               

               
Cow position:
               
chr13:38329860-38329405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 7
               

               
Conread position:
               
28-475
               

               
Cow position:
               
chr13:33875892-33875458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
269, 7
               

               
Conread position:
               
28-480
               

               
Cow position:
               
chr13:17291901-17292347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 7
               

               
Conread position:
               
29-341
               

               
Cow position:
               
chr13:21039368-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chr13:9643651-9643983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
34-259
               

               
Cow position:
               
chr13:3003673-3003451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
34-344
               

               
Cow position:
               
chr13:7010694-7010392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 131
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chr13:14927463-14927283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr13:15172183-15172404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
35-318
               

               
Cow position:
               
chr13:33517700-33517976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-322
               

               
Cow position:
               
chr13:37521156-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
251, 79
               

               
Conread position:
               
35-344
               

               
Cow position:
               
chr13:889955-890248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
226, 74
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr13:13306330-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 182
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr13:20605895-20606198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 81
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr13:34508100-34507805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
213, 75
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr13:6153555-6153878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
130, 91
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr13:13176873-13176554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
214, 53
               

               
Conread position:
               
35-383
               

               
Cow position:
               
chr13:18835410-18835085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
251, 76
               

               
Conread position:
               
35-395
               

               
Cow position:
               
chr13:48037844-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-407
               

               
Cow position:
               
chr13:17439542-17439912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
35-407
               

               
Cow position:
               
chr13:55315965-55316341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 68
               

               
Conread position:
               
35-408
               

               
Cow position:
               
chr13:23856439-23856066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
219, 40
               

               
Conread position:
               
35-412
               

               
Cow position:
               
chr13:52585797-52586183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
35-455
               

               
Cow position:
               
chr13:54418456-54418026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
35-466
               

               
Cow position:
               
chr13:971674-972102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 85
               

               
Conread position:
               
35-471
               

               
Cow position:
               
chr13:27525038-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 8
               

               
Conread position:
               
35-474
               

               
Cow position:
               
chr13:17745466-17745045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
35-474
               

               
Cow position:
               
chr13:61976741-61977171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 16
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr13:18166954-18166518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
206, 81
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr13:25817737-25817315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 73
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr13:30651399-30650971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
262, 58
               

               
Conread position:
               
35-476
               

               
Cow position:
               
chr13:15192670-15193104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
261, 78
               

               
Conread position:
               
35-476
               

               
Cow position:
               
chr13:34261456-34261020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
174, 78
               

               
Conread position:
               
35-482
               

               
Cow position:
               
chr13:54702414-54701959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 16
               

               
Conread position:
               
35-483
               

               
Cow position:
               
chr13:23960582-23961029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
35-484
               

               
Cow position:
               
chr13:15288702-15289143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr13:23269989-23270412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr13:55673981-55674434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr13:33256720-33256272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr13:37069573-37069114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
213, 81
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr13:51528222-51528665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
35-488
               

               
Cow position:
               
chr13:34263149-34263597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 76
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr13:13501398-13501839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 27
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr13:15869343-15868881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
206, 54
               

               
Conread position:
               
35-491
               

               
Cow position:
               
chr13:12990071-12989632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr13:6189406-6189832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
328, 76
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr13:38283760-38284204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 97
               

               
Conread position:
               
35-493
               

               
Cow position:
               
chr13:19023615-19024083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
35-498
               

               
Cow position:
               
chr13:311654-311194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
251, 67
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr13:2884277-2883820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
35-517
               

               
Cow position:
               
chr13:43480285-43479803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
35-528
               

               
Cow position:
               
chr13:42860346-42860833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 125
               

               
Conread position:
               
36-220
               

               
Cow position:
               
chr13:54331242-54331060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
36-261
               

               
Cow position:
               
chr13:17815994-17815776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
36-482
               

               
Cow position:
               
chr13:7059698-7059238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
174, 134
               

               
Conread position:
               
37-216
               

               
Cow position:
               
chr13:9884990-9884814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
39-172
               

               
Cow position:
               
chr13:46329247-46329376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr13:60690502-60690679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
39-283
               

               
Cow position:
               
chr13:20041741-20041985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
39-386
               

               
Cow position:
               
chr13:40943470-40943122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr13:20679565-20679197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr13:17970814-17971173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-470
               

               
Cow position:
               
chr13:19393508-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
39-473
               

               
Cow position:
               
chr13:15041251-15041687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
39-486
               

               
Cow position:
               
chr13:44323122-44322664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-486
               

               
Cow position:
               
chr13:45022988-45023447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-511
               

               
Cow position:
               
chr13:45353269-45352778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
40-478
               

               
Cow position:
               
chr13:17821040-17821476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
40-524
               

               
Cow position:
               
chr13:56686646-56686177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
226, 63
               

               
Conread position:
               
41-475
               

               
Cow position:
               
chr13:24715460-24715035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
45-156
               

               
Cow position:
               
chr13:21524643-21524532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-214
               

               
Cow position:
               
chr13:15740284-15740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
45-385
               

               
Cow position:
               
chr13:15167036-15166697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
199, 6
               

               
Conread position:
               
45-483
               

               
Cow position:
               
chr13:12283052-12282615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
164, 342
               

               
Conread position:
               
49-501
               

               
Cow position:
               
chr13:13339074-13338620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
118, 159
               

               
Conread position:
               
51-474
               

               
Cow position:
               
chr13:23667468-23667044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
56-256
               

               
Cow position:
               
chr13:30794024-30793828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 148
               

               
Conread position:
               
56-473
               

               
Cow position:
               
chr13:20509935-20509515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
59-486
               

               
Cow position:
               
chr13:34281879-34281456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 6
               

               
Conread position:
               
61-304
               

               
Cow position:
               
chr13:3701631-3701402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
225, 22
               

               
Conread position:
               
63-207
               

               
Cow position:
               
chr13:16155521-16155666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
63-207
               

               
Cow position:
               
chr13:27027572-27027719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr13:60393503-60393646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr13:61170519-61170666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr13:6975594-6975743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr13:38012557-38012403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
63-245
               

               
Cow position:
               
chr13:21210058-21209883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
63-295
               

               
Cow position:
               
chr13:25261612-25261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
63-295
               

               
Cow position:
               
chr13:55295429-55295651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
188, 53
               

               
Conread position:
               
63-300
               

               
Cow position:
               
chr13:12682345-12682579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 142
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr13:5091465-5091708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 144
               

               
Conread position:
               
63-328
               

               
Cow position:
               
chr13:17800268-17800009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
188, 53
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr13:24376686-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
186, 69
               

               
Conread position:
               
63-345
               

               
Cow position:
               
chr13:46181985-46181712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr13:25531592-25531871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 55
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr13:31808708-31808440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
238, 41
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr13:45604222-45604497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
184, 107
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr13:60341010-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
144, 109
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr13:25062606-25062331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
223, 72
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr13:26369722-26369434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr13:17347003-17346715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr13:18244052-18243767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr13:22886796-22887084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr13:26383035-26383330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 152
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr13:8524426-8524714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
178, 40
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr13:17622480-17622192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
221, 25
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr13:20816509-20816227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
63-382
               

               
Cow position:
               
chr13:3315478-3315793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 87
               

               
Conread position:
               
63-383
               

               
Cow position:
               
chr13:37484074-37484398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 147
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr13:21176127-21176446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr13:53566795-53566474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 146
               

               
Conread position:
               
63-395
               

               
Cow position:
               
chr13:43762361-43762037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
184, 51
               

               
Conread position:
               
63-402
               

               
Cow position:
               
chr13:11460821-11460495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 122
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr13:12546709-12547052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 142
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr13:15281740-15282078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr13:20706006-20706349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 148
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr13:50690196-50690543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 147
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr13:2414222-2413884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr13:6086704-6087037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
223, 106
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr13:18172536-18172191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 59
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr13:20683926-20684276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr13:56154965-56155296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
198, 45
               

               
Conread position:
               
63-436
               

               
Cow position:
               
chr13:20666190-20666561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
63-436
               

               
Cow position:
               
chr13:23479225-23478853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 38
               

               
Conread position:
               
63-447
               

               
Cow position:
               
chr13:58043825-58043439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
172, 53
               

               
Conread position:
               
63-452
               

               
Cow position:
               
chr13:24230409-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
63-454
               

               
Cow position:
               
chr13:20814084-20814467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
296, 104
               

               
Conread position:
               
63-455
               

               
Cow position:
               
chr13:52227904-52228292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
63-460
               

               
Cow position:
               
chr13:37521536-37521948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
63-465
               

               
Cow position:
               
chr13:15974806-15974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
63-472
               

               
Cow position:
               
chr13:15257182-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 96
               

               
Conread position:
               
63-473
               

               
Cow position:
               
chr13:34728641-34729053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
63-473
               

               
Cow position:
               
chr13:36877268-36876853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr13:37818561-37818958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:2774320-2773901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
221, 32
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:6079223-6079617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
221, 46
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:12670249-12670666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:15234108-15233732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
182, 59
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:15872645-15872223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:52199285-52198891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
223, 40
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr13:61188731-61188314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
191, 29
               

               
Conread position:
               
63-476
               

               
Cow position:
               
chr13:26261598-26262007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
97, 148
               

               
Conread position:
               
63-478
               

               
Cow position:
               
chr13:42200815-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 70
               

               
Conread position:
               
63-479
               

               
Cow position:
               
chr13:20497848-20497424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
63-479
               

               
Cow position:
               
chr13:46525246-46525647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr13:20784784-20784373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 61
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr13:42114217-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr13:1155512-1155926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
189, 53
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr13:14544318-14543913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 143
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr13:16292742-16292316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr13:13089220-13088810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr13:20863822-20864205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr13:21235489-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 53
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr13:47007540-47007935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
227, 48
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr13:9974872-9975293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr13:12448792-12449205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 145
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr13:21241896-21242301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 47
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr13:20820644-20821066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr13:25926988-25926558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
190, 55
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr13:51014984-51015419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
63-491
               

               
Cow position:
               
chr13:20879638-20880057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr13:6616552-6616992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 112
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr13:12045137-12045576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr13:14063328-14063753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 68
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr13:17114184-17114612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
187, 12
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr13:37592742-37593177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
63-493
               

               
Cow position:
               
chr13:52749292-52749695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
63-497
               

               
Cow position:
               
chr13:51940927-51940511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
185, 50
               

               
Conread position:
               
63-498
               

               
Cow position:
               
chr13:152147-151729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
224, 41
               

               
Conread position:
               
63-498
               

               
Cow position:
               
chr13:46112163-46111730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr13:19223845-19223411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
228, 147
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr13:21287894-21288323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 50
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr13:12977759-12977340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
296, 8
               

               
Conread position:
               
63-502
               

               
Cow position:
               
chr13:32283323-32282885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
63-527
               

               
Cow position:
               
chr13:32017326-32017780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
294, 147
               

               
Conread position:
               
64-163
               

               
Cow position:
               
chr13:40482537-40482636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-283
               

               
Cow position:
               
chr13:562943-563158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
64-346
               

               
Cow position:
               
chr13:8202687-8202947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
64-346
               

               
Cow position:
               
chr13:12202560-12202281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
176, 47
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr13:8201291-8201578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
201, 52
               

               
Conread position:
               
64-361
               

               
Cow position:
               
chr13:6060812-6061104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 41
               

               
Conread position:
               
64-363
               

               
Cow position:
               
chr13:6945568-6945279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
64-395
               

               
Cow position:
               
chr13:7076451-7076125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
64-395
               

               
Cow position:
               
chr13:10928795-10929119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 81
               

               
Conread position:
               
64-470
               

               
Cow position:
               
chr13:19022473-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 44
               

               
Conread position:
               
64-470
               

               
Cow position:
               
chr13:34995131-34995521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
64-489
               

               
Cow position:
               
chr13:18852271-18851862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 64
               

               
Conread position:
               
64-490
               

               
Cow position:
               
chr13:26480019-26480432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
65-208
               

               
Cow position:
               
chr13:11147500-11147357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
65-250
               

               
Cow position:
               
chr13:49283148-49283332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
65-253
               

               
Cow position:
               
chr13:54344970-54344785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
101, 142
               

               
Conread position:
               
65-349
               

               
Cow position:
               
chr13:20649789-20650071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr13:11954919-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr13:15884819-15885117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
65-383
               

               
Cow position:
               
chr13:9593701-9593387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
65-407
               

               
Cow position:
               
chr13:60974272-60973936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
65-460
               

               
Cow position:
               
chr13:24369778-24369386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 131
               

               
Conread position:
               
65-470
               

               
Cow position:
               
chr13:6974354-6973953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
65-475
               

               
Cow position:
               
chr13:20839761-20839366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
219, 144
               

               
Conread position:
               
65-483
               

               
Cow position:
               
chr13:52284103-52283688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
193, 66
               

               
Conread position:
               
65-490
               

               
Cow position:
               
chr13:17021526-17021955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
65-492
               

               
Cow position:
               
chr13:10845787-10845387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
219, 52
               

               
Conread position:
               
65-492
               

               
Cow position:
               
chr13:35659947-35659525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 62
               

               
Conread position:
               
65-500
               

               
Cow position:
               
chr13:13261202-13260752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 135
               

               
Conread position:
               
65-530
               

               
Cow position:
               
chr13:21276049-21275588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
66-383
               

               
Cow position:
               
chr13:15528835-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 140
               

               
Conread position:
               
66-402
               

               
Cow position:
               
chr13:547681-547356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
66-460
               

               
Cow position:
               
chr13:57493990-57494372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
66-466
               

               
Cow position:
               
chr13:59687686-59688068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
218, 56
               

               
Conread position:
               
66-484
               

               
Cow position:
               
chr13:8245139-8245537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 95
               

               
Conread position:
               
67-214
               

               
Cow position:
               
chr13:5079033-5079176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
68-215
               

               
Cow position:
               
chr13:57323647-57323501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
68-249
               

               
Cow position:
               
chr13:46458813-46458641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
68-455
               

               
Cow position:
               
chr13:15991031-15991425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
68-476
               

               
Cow position:
               
chr13:22085560-22085947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 48
               

               
Conread position:
               
69-436
               

               
Cow position:
               
chr13:12408093-12408470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 119
               

               
Conread position:
               
69-489
               

               
Cow position:
               
chr13:37617514-37617086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
71-207
               

               
Cow position:
               
chr13:22025521-22025653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
71-437
               

               
Cow position:
               
chr13:47756562-47756183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
90, 133
               

               
Conread position:
               
71-473
               

               
Cow position:
               
chr13:15958809-15958410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr13:1231839-1231407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
90, 182
               

               
Conread position:
               
72-273
               

               
Cow position:
               
chr13:34113341-34113536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
72-479
               

               
Cow position:
               
chr13:53574154-53573761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 5
               

               
Conread position:
               
72-488
               

               
Cow position:
               
chr13:55583386-55582965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
72-492
               

               
Cow position:
               
chr13:51328735-51328319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
73-346
               

               
Cow position:
               
chr13:14771647-14771371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 132
               

               
Conread position:
               
74-338
               

               
Cow position:
               
chr13:12618924-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
74-466
               

               
Cow position:
               
chr13:47186409-47186025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
207, 49
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr13:5169322-5168892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
75-470
               

               
Cow position:
               
chr13:13320964-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 27
               

               
Conread position:
               
75-475
               

               
Cow position:
               
chr13:41806964-41806562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
75-485
               

               
Cow position:
               
chr13:6540129-6540527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
76-262
               

               
Cow position:
               
chr13:21189464-21189284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
76-407
               

               
Cow position:
               
chr13:5082837-5082507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
174, 93
               

               
Conread position:
               
76-485
               

               
Cow position:
               
chr13:49503345-49503762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 69
               

               
Conread position:
               
81-465
               

               
Cow position:
               
chr13:17338612-17338221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
81-470
               

               
Cow position:
               
chr13:24586224-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
81-484
               

               
Cow position:
               
chr13:52055418-52055816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
203, 33
               

               
Conread position:
               
81-491
               

               
Cow position:
               
chr13:19188482-19188082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
81-505
               

               
Cow position:
               
chr13:5758167-5758577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
191, 37
               

               
Conread position:
               
81-531
               

               
Cow position:
               
chr13:49022692-49023134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
82-346
               

               
Cow position:
               
chr13:7488720-7488460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
205, 89
               

               
Conread position:
               
82-361
               

               
Cow position:
               
chr13:15110501-15110218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
82-475
               

               
Cow position:
               
chr13:10988893-10989288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
83-475
               

               
Cow position:
               
chr13:607085-607477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
83-491
               

               
Cow position:
               
chr13:49805151-49804756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
84-487
               

               
Cow position:
               
chr13:14016390-14016785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 127
               

               
Conread position:
               
89-558
               

               
Cow position:
               
chr13:13954218-13954686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
91-487
               

               
Cow position:
               
chr13:29831266-29831651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
92-311
               

               
Cow position:
               
chr13:52922263-52922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
151, 118
               

               
Conread position:
               
92-488
               

               
Cow position:
               
chr13:20473520-20473903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
95-383
               

               
Cow position:
               
chr13:15903181-15902905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
192, 13
               

               
Conread position:
               
95-484
               

               
Cow position:
               
chr13:20580073-20579696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
98-491
               

               
Cow position:
               
chr13:54583042-54582643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
99-488
               

               
Cow position:
               
chr13:17158711-17159109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 106
               

               
Conread position:
               
103-321
               

               
Cow position:
               
chr13:28652959-28652747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
183, 86
               

               
Conread position:
               
103-475
               

               
Cow position:
               
chr13:20880766-20881135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 107
               

               
Conread position:
               
104-475
               

               
Cow position:
               
chr13:60375330-60375702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
107-492
               

               
Cow position:
               
chr13:17568943-17569329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
108-475
               

               
Cow position:
               
chr13:15195049-15195415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
108-491
               

               
Cow position:
               
chr13:19581932-19582310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
176, 102
               

               
Conread position:
               
112-460
               

               
Cow position:
               
chr13:48165274-48165622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
112-483
               

               
Cow position:
               
chr13:21107289-21106920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
112-485
               

               
Cow position:
               
chr13:54388870-54389243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
154, 38
               

               
Conread position:
               
114-408
               

               
Cow position:
               
chr13:18696991-18696696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
114-485
               

               
Cow position:
               
chr13:26698348-26698721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
114-518
               

               
Cow position:
               
chr13:21135754-21136171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
115-460
               

               
Cow position:
               
chr13:11808706-11808382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
171, 78
               

               
Conread position:
               
116-383
               

               
Cow position:
               
chr13:31814018-31813757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
150, 94
               

               
Conread position:
               
116-475
               

               
Cow position:
               
chr13:58525081-58524728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
116-488
               

               
Cow position:
               
chr13:25537779-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
116-497
               

               
Cow position:
               
chr13:5671445-5671822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 41
               

               
Conread position:
               
116-507
               

               
Cow position:
               
chr13:1363841-1363442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
117-473
               

               
Cow position:
               
chr13:8374626-8374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 88
               

               
Conread position:
               
118-358
               

               
Cow position:
               
chr13:17966064-17966302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
168, 92
               

               
Conread position:
               
118-474
               

               
Cow position:
               
chr13:18058104-18058460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
118-495
               

               
Cow position:
               
chr13:48598055-48597675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
120-383
               

               
Cow position:
               
chr13:11381579-11381842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
120-483
               

               
Cow position:
               
chr13:28552739-28552365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 137
               

               
Conread position:
               
122-465
               

               
Cow position:
               
chr13:48375504-48375819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
123-493
               

               
Cow position:
               
chr13:21269440-21269812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
126-477
               

               
Cow position:
               
chr13:20288466-20288120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
127-397
               

               
Cow position:
               
chr13:62518196-62518459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
134-470
               

               
Cow position:
               
chr13:20217259-20217607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
140-470
               

               
Cow position:
               
chr13:1569046-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
223, 70
               

               
Conread position:
               
144-483
               

               
Cow position:
               
chr13:14576325-14575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
144-492
               

               
Cow position:
               
chr13:15194613-15194951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
151-490
               

               
Cow position:
               
chr13:19279203-19278867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
152-406
               

               
Cow position:
               
chr13:19320646-19320387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
158-484
               

               
Cow position:
               
chr13:12974907-12974593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
177-456
               

               
Cow position:
               
chr13:50750968-50751247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
177-466
               

               
Cow position:
               
chr13:46329518-46329808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
183-492
               

               
Cow position:
               
chr13:13196321-13196010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
183-500
               

               
Cow position:
               
chr13:7149308-7148996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
190-485
               

               
Cow position:
               
chr13:18197529-18197830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
195-485
               

               
Cow position:
               
chr13:21171500-21171796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
195-492
               

               
Cow position:
               
chr13:7265051-7265338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
195-492
               

               
Cow position:
               
chr13:56034785-56035091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
196-486
               

               
Cow position:
               
chr13:20534967-20534674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
206-469
               

               
Cow position:
               
chr13:35557043-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
208-492
               

               
Cow position:
               
chr13:21170589-21170297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
209-478
               

               
Cow position:
               
chr13:62008171-62007890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
209-506
               

               
Cow position:
               
chr13:20314560-20314873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
210-435
               

               
Cow position:
               
chr13:52057618-52057383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
213-490
               

               
Cow position:
               
chr13:11103136-11103436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 288
               

               
Conread position:
               
215-485
               

               
Cow position:
               
chr13:17089470-17089739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
219-486
               

               
Cow position:
               
chr13:17611501-17611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
225-470
               

               
Cow position:
               
chr13:55494477-55494728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
232-492
               

               
Cow position:
               
chr13:38035872-38035608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
240-479
               

               
Cow position:
               
chr13:56535482-56535248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
241-493
               

               
Cow position:
               
chr13:21980954-21981204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
244-496
               

               
Cow position:
               
chr13:57985915-57986164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
261-535
               

               
Cow position:
               
chr13:11933596-11933880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 239
               

               
Conread position:
               
271-474
               

               
Cow position:
               
chr13:37614193-37614411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
271-475
               

               
Cow position:
               
chr13:8450327-8450119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
271-521
               

               
Cow position:
               
chr13:3209323-3209584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
282-489
               

               
Cow position:
               
chr13:33854698-33854911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 163
               

               
Conread position:
               
288-474
               

               
Cow position:
               
chr13:52913852-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
288-474
               

               
Cow position:
               
chr13:53850803-53850607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
288-484
               

               
Cow position:
               
chr13:21277488-21277679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
288-493
               

               
Cow position:
               
chr13:31507465-31507673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
290-490
               

               
Cow position:
               
chr13:34532957-34533156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
295-500
               

               
Cow position:
               
chr13:51249410-51249616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
298-482
               

               
Cow position:
               
chr13:11565804-11565618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
304-490
               

               
Cow position:
               
chr13:22345316-22345504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
305-494
               

               
Cow position:
               
chr13:3153710-3153515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
60, 179
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr13:620294-620487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr13:23823084-23823260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
320-493
               

               
Cow position:
               
chr13:5659822-5659996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 159
               
Show alignments to all cow chromosomes.