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Cow genome map

           
Conread name:
           
Ss1.1-Pig1-46K21.5
        

               
Conread position:
               
11-462
               

               
Cow position:
               
chr16:24702591-24703038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr16:24147897-24148193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
236, 14
               

               
Conread position:
               
18-346
               

               
Cow position:
               
chr16:53048295-53048619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
223, 154
               

               
Conread position:
               
20-356
               

               
Cow position:
               
chr16:5845419-5845747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
20-361
               

               
Cow position:
               
chr16:30143464-30143118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
20-436
               

               
Cow position:
               
chr16:33226784-33226376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
231, 8
               

               
Conread position:
               
20-490
               

               
Cow position:
               
chr16:14754574-14754111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
264, 8
               

               
Conread position:
               
25-365
               

               
Cow position:
               
chr16:39514327-39513989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
25-407
               

               
Cow position:
               
chr16:5363644-5364031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 10
               

               
Conread position:
               
25-484
               

               
Cow position:
               
chr16:51710376-51709938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
265, 9
               

               
Conread position:
               
25-485
               

               
Cow position:
               
chr16:50417936-50417498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
25-486
               

               
Cow position:
               
chr16:23483040-23483492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
184, 10
               

               
Conread position:
               
28-159
               

               
Cow position:
               
chr16:43759120-43758988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
28-354
               

               
Cow position:
               
chr16:8367070-8366756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
28-460
               

               
Cow position:
               
chr16:4910776-4910336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
28-472
               

               
Cow position:
               
chr16:47518605-47519030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
28-475
               

               
Cow position:
               
chr16:23681127-23681562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
32-477
               

               
Cow position:
               
chr16:32781121-32781575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 7
               

               
Conread position:
               
34-464
               

               
Cow position:
               
chr16:5654268-5654691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
337, 138
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr16:15320708-15320535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr16:24403491-24403670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr16:49141797-49141598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr16:18678958-18679217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
219, 87
               

               
Conread position:
               
35-300
               

               
Cow position:
               
chr16:33507824-33508072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
252, 169
               

               
Conread position:
               
35-357
               

               
Cow position:
               
chr16:35937097-35937415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-358
               

               
Cow position:
               
chr16:30715253-30715583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
205, 181
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr16:32327413-32327739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
175, 78
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr16:36203854-36203536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
35-403
               

               
Cow position:
               
chr16:9973741-9973373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 170
               

               
Conread position:
               
35-408
               

               
Cow position:
               
chr16:8933658-8933297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
35-408
               

               
Cow position:
               
chr16:29608279-29608640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-436
               

               
Cow position:
               
chr16:11615467-11615081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
251, 76
               

               
Conread position:
               
35-470
               

               
Cow position:
               
chr16:29380015-29380454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
35-472
               

               
Cow position:
               
chr16:238022-238464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr16:23058675-23058232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr16:31978427-31977985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
132, 88
               

               
Conread position:
               
35-477
               

               
Cow position:
               
chr16:28191828-28192256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
352, 95
               

               
Conread position:
               
35-481
               

               
Cow position:
               
chr16:4857330-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
35-482
               

               
Cow position:
               
chr16:40333564-40333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 126
               

               
Conread position:
               
35-482
               

               
Cow position:
               
chr16:42970170-42969714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
222, 88
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr16:38709065-38708624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 16
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr16:38905465-38905012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr16:42079078-42078636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr16:8959302-8958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
126, 176
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr16:32586960-32587426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr16:21450609-21451067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
35-494
               

               
Cow position:
               
chr16:16597323-16597779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
35-497
               

               
Cow position:
               
chr16:34168356-34168810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 81
               

               
Conread position:
               
35-498
               

               
Cow position:
               
chr16:50282670-50282209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 177
               

               
Conread position:
               
35-499
               

               
Cow position:
               
chr16:26610394-26610874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
36-283
               

               
Cow position:
               
chr16:9790869-9790630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr16:47620142-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
250, 95
               

               
Conread position:
               
36-487
               

               
Cow position:
               
chr16:13689425-13689876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
36-490
               

               
Cow position:
               
chr16:10040076-10039629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
38-492
               

               
Cow position:
               
chr16:10148047-10148484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
39-163
               

               
Cow position:
               
chr16:20662910-20663035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
39-206
               

               
Cow position:
               
chr16:5293427-5293588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr16:902120-901945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
39-300
               

               
Cow position:
               
chr16:13791278-13791536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 167
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr16:49169618-49169253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr16:15960530-15960160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
245, 171
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr16:20025209-20025570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
245, 58
               

               
Conread position:
               
39-408
               

               
Cow position:
               
chr16:5636357-5636715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
39-436
               

               
Cow position:
               
chr16:48006727-48006332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
39-457
               

               
Cow position:
               
chr16:3614513-3614920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
39-474
               

               
Cow position:
               
chr16:48398481-48398058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-475
               

               
Cow position:
               
chr16:29557866-29557423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
246, 163
               

               
Conread position:
               
39-475
               

               
Cow position:
               
chr16:29655091-29655515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
39-475
               

               
Cow position:
               
chr16:39165010-39165434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
39-475
               

               
Cow position:
               
chr16:51598838-51598412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-483
               

               
Cow position:
               
chr16:9728969-9729406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
244, 82
               

               
Conread position:
               
39-485
               

               
Cow position:
               
chr16:25170149-25170604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
39-486
               

               
Cow position:
               
chr16:45139434-45139876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 47
               

               
Conread position:
               
39-488
               

               
Cow position:
               
chr16:26649869-26649418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
39-491
               

               
Cow position:
               
chr16:52789825-52790248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
39-502
               

               
Cow position:
               
chr16:49126419-49125963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 72
               

               
Conread position:
               
40-251
               

               
Cow position:
               
chr16:16543836-16544037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
42-484
               

               
Cow position:
               
chr16:53509227-53508782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
42-485
               

               
Cow position:
               
chr16:13611684-13611227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
43-355
               

               
Cow position:
               
chr16:13752352-13752056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
43-475
               

               
Cow position:
               
chr16:53428025-53428455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
44-365
               

               
Cow position:
               
chr16:11105318-11105641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 167
               

               
Conread position:
               
45-401
               

               
Cow position:
               
chr16:50688293-50688645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
239, 14
               

               
Conread position:
               
45-408
               

               
Cow position:
               
chr16:37669960-37669607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
45-483
               

               
Cow position:
               
chr16:15504755-15504324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
45-490
               

               
Cow position:
               
chr16:13307096-13306655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
45-490
               

               
Cow position:
               
chr16:45731604-45731189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
210, 94
               

               
Conread position:
               
46-332
               

               
Cow position:
               
chr16:21904934-21905215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
46-344
               

               
Cow position:
               
chr16:14758503-14758800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
46-361
               

               
Cow position:
               
chr16:30037223-30036909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
215, 161
               

               
Conread position:
               
46-484
               

               
Cow position:
               
chr16:9932931-9933370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
52-489
               

               
Cow position:
               
chr16:45554214-45554647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr16:24143154-24142970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
56-282
               

               
Cow position:
               
chr16:33411241-33411469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
56-483
               

               
Cow position:
               
chr16:31117838-31117410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
58-470
               

               
Cow position:
               
chr16:14106431-14106840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 45
               

               
Conread position:
               
60-208
               

               
Cow position:
               
chr16:29399780-29399931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
61-382
               

               
Cow position:
               
chr16:3633902-3634220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 45
               

               
Conread position:
               
61-432
               

               
Cow position:
               
chr16:54679454-54679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 28
               

               
Conread position:
               
61-484
               

               
Cow position:
               
chr16:5896206-5896629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
180, 55
               

               
Conread position:
               
61-491
               

               
Cow position:
               
chr16:11008129-11008543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
186, 20
               

               
Conread position:
               
63-164
               

               
Cow position:
               
chr16:52802429-52802530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-175
               

               
Cow position:
               
chr16:21762512-21762402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
63-179
               

               
Cow position:
               
chr16:56853742-56853858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-207
               

               
Cow position:
               
chr16:33235346-33235202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr16:43324124-43323980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr16:47017456-47017309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
63-247
               

               
Cow position:
               
chr16:30939522-30939699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
63-249
               

               
Cow position:
               
chr16:3918319-3918500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
63-249
               

               
Cow position:
               
chr16:25287902-25287721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
63-258
               

               
Cow position:
               
chr16:44973285-44973471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
63-285
               

               
Cow position:
               
chr16:39385190-39385413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
63-293
               

               
Cow position:
               
chr16:16177607-16177830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
187, 53
               

               
Conread position:
               
63-301
               

               
Cow position:
               
chr16:16424815-16424590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
223, 68
               

               
Conread position:
               
63-317
               

               
Cow position:
               
chr16:35168514-35168768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
184, 142
               

               
Conread position:
               
63-338
               

               
Cow position:
               
chr16:11568324-11568064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr16:594440-594157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr16:48370159-48369885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
186, 42
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr16:8280000-8279724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
223, 75
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr16:13233156-13232880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
197, 50
               

               
Conread position:
               
63-359
               

               
Cow position:
               
chr16:23871862-23871569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr16:20634089-20633795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
191, 55
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr16:11103036-11102739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
63-362
               

               
Cow position:
               
chr16:31122461-31122167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
63-365
               

               
Cow position:
               
chr16:12060202-12060503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
183, 142
               

               
Conread position:
               
63-365
               

               
Cow position:
               
chr16:39394365-39394656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
224, 70
               

               
Conread position:
               
63-383
               

               
Cow position:
               
chr16:4626606-4626286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 147
               

               
Conread position:
               
63-383
               

               
Cow position:
               
chr16:53627634-53627323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
221, 48
               

               
Conread position:
               
63-384
               

               
Cow position:
               
chr16:47643208-47643519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
187, 50
               

               
Conread position:
               
63-394
               

               
Cow position:
               
chr16:571128-570803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
218, 142
               

               
Conread position:
               
63-400
               

               
Cow position:
               
chr16:48494767-48494431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
188, 64
               

               
Conread position:
               
63-401
               

               
Cow position:
               
chr16:48191212-48190889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
223, 55
               

               
Conread position:
               
63-406
               

               
Cow position:
               
chr16:19003731-19003403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
223, 124
               

               
Conread position:
               
63-406
               

               
Cow position:
               
chr16:40562016-40562360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 146
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr16:4059148-4059485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
191, 68
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr16:7498857-7499180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
300, 51
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr16:28922577-28922903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr16:39172376-39172018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
63-407
               

               
Cow position:
               
chr16:48340903-48340565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
186, 54
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr16:24825859-24826204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
63-408
               

               
Cow position:
               
chr16:39616532-39616853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
223, 47
               

               
Conread position:
               
63-412
               

               
Cow position:
               
chr16:19408723-19408395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
222, 45
               

               
Conread position:
               
63-435
               

               
Cow position:
               
chr16:45609776-45610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
63-456
               

               
Cow position:
               
chr16:23730150-23729736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
63-459
               

               
Cow position:
               
chr16:26676901-26676504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
63-459
               

               
Cow position:
               
chr16:45677063-45676689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
223, 48
               

               
Conread position:
               
63-460
               

               
Cow position:
               
chr16:14568696-14568305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
183, 106
               

               
Conread position:
               
63-460
               

               
Cow position:
               
chr16:33645803-33646201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
63-465
               

               
Cow position:
               
chr16:20476325-20476724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
63-470
               

               
Cow position:
               
chr16:48095975-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 32
               

               
Conread position:
               
63-470
               

               
Cow position:
               
chr16:50873386-50872993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
63-473
               

               
Cow position:
               
chr16:33704588-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:8323197-8322795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 142
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:14242165-14242569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
186, 44
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:24128490-24128908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 108
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:39474349-39473957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:42092587-42092177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
224, 38
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:45047835-45047454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
234, 40
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:48956586-48957000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr16:49229979-49229573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
63-477
               

               
Cow position:
               
chr16:46552607-46552995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
221, 52
               

               
Conread position:
               
63-477
               

               
Cow position:
               
chr16:54578956-54579368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 63
               

               
Conread position:
               
63-479
               

               
Cow position:
               
chr16:14360893-14361299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
63-479
               

               
Cow position:
               
chr16:51578631-51578244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
63-481
               

               
Cow position:
               
chr16:25839406-25839818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 18
               

               
Conread position:
               
63-483
               

               
Cow position:
               
chr16:7665420-7665848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
98, 142
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr16:15370468-15370894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr16:17142721-17143151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
173, 98
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr16:38663923-38663499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr16:47820360-47820784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr16:9985601-9985191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 98
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr16:35758002-35758414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
221, 18
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr16:50288946-50289369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
63-485
               

               
Cow position:
               
chr16:56082571-56082151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
221, 54
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr16:13989772-13990178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
63-489
               

               
Cow position:
               
chr16:820040-820466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
63-489
               

               
Cow position:
               
chr16:17745624-17746061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr16:56231612-56232031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 142
               

               
Conread position:
               
63-491
               

               
Cow position:
               
chr16:10032417-10032863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
63-491
               

               
Cow position:
               
chr16:23472540-23472958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
63-492
               

               
Cow position:
               
chr16:22772757-22773195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
63-493
               

               
Cow position:
               
chr16:46752487-46752053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 111
               

               
Conread position:
               
63-495
               

               
Cow position:
               
chr16:16402538-16402092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
223, 126
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr16:7010859-7011295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 40
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr16:37116863-37117300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr16:18205760-18206180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
192, 48
               

               
Conread position:
               
63-500
               

               
Cow position:
               
chr16:49336016-49336448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
63-507
               

               
Cow position:
               
chr16:43308780-43308336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 151
               

               
Conread position:
               
64-206
               

               
Cow position:
               
chr16:12085991-12085849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-359
               

               
Cow position:
               
chr16:35623455-35623170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
64-361
               

               
Cow position:
               
chr16:53830799-53830510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
178, 146
               

               
Conread position:
               
64-384
               

               
Cow position:
               
chr16:12633683-12633990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
64-425
               

               
Cow position:
               
chr16:48087081-48086722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
64-451
               

               
Cow position:
               
chr16:56522683-56522296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
64-470
               

               
Cow position:
               
chr16:41752783-41752385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
64-470
               

               
Cow position:
               
chr16:42777753-42778141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
190, 135
               

               
Conread position:
               
64-488
               

               
Cow position:
               
chr16:8066091-8065671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
64-491
               

               
Cow position:
               
chr16:39695687-39695261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 108
               

               
Conread position:
               
64-498
               

               
Cow position:
               
chr16:13698298-13698743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 145
               

               
Conread position:
               
65-256
               

               
Cow position:
               
chr16:9845922-9845734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
144, 103
               

               
Conread position:
               
65-283
               

               
Cow position:
               
chr16:31159787-31159571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
65-300
               

               
Cow position:
               
chr16:23990696-23990461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 146
               

               
Conread position:
               
65-328
               

               
Cow position:
               
chr16:4144855-4145112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
65-345
               

               
Cow position:
               
chr16:52889619-52889345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
183, 49
               

               
Conread position:
               
65-346
               

               
Cow position:
               
chr16:600736-601012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
65-346
               

               
Cow position:
               
chr16:675284-675557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 107
               

               
Conread position:
               
65-346
               

               
Cow position:
               
chr16:37380062-37380337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
65-355
               

               
Cow position:
               
chr16:5352040-5351766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
65-359
               

               
Cow position:
               
chr16:23737974-23738261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr16:43105722-43105434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
65-362
               

               
Cow position:
               
chr16:11790804-11791093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
222, 146
               

               
Conread position:
               
65-460
               

               
Cow position:
               
chr16:14124947-14125307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
65-469
               

               
Cow position:
               
chr16:7456674-7456264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
65-481
               

               
Cow position:
               
chr16:18758053-18757627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
65-482
               

               
Cow position:
               
chr16:48385611-48385209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
65-485
               

               
Cow position:
               
chr16:15824651-15824232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
182, 59
               

               
Conread position:
               
65-485
               

               
Cow position:
               
chr16:35195820-35195399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
65-486
               

               
Cow position:
               
chr16:54665012-54664592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
65-502
               

               
Cow position:
               
chr16:55683084-55683525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
66-346
               

               
Cow position:
               
chr16:4981588-4981310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
66-346
               

               
Cow position:
               
chr16:16548403-16548680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
191, 51
               

               
Conread position:
               
66-492
               

               
Cow position:
               
chr16:42242327-42241900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
67-207
               

               
Cow position:
               
chr16:6379317-6379178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
67-413
               

               
Cow position:
               
chr16:16265309-16264966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
67-490
               

               
Cow position:
               
chr16:8069025-8068600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
181, 44
               

               
Conread position:
               
67-491
               

               
Cow position:
               
chr16:11775257-11774835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
68-346
               

               
Cow position:
               
chr16:24672567-24672291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 93
               

               
Conread position:
               
68-475
               

               
Cow position:
               
chr16:55042769-55042365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 140
               

               
Conread position:
               
68-483
               

               
Cow position:
               
chr16:11957790-11957372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr16:4399519-4399817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 184
               

               
Conread position:
               
71-405
               

               
Cow position:
               
chr16:8812291-8811968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
71-441
               

               
Cow position:
               
chr16:17982347-17981981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
71-465
               

               
Cow position:
               
chr16:15762366-15761960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 141
               

               
Conread position:
               
71-470
               

               
Cow position:
               
chr16:42443949-42444356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
213, 138
               

               
Conread position:
               
71-474
               

               
Cow position:
               
chr16:50906264-50906678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
71-489
               

               
Cow position:
               
chr16:11422108-11422532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
216, 45
               

               
Conread position:
               
71-500
               

               
Cow position:
               
chr16:52835084-52834673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
72-346
               

               
Cow position:
               
chr16:56787980-56787709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
72-490
               

               
Cow position:
               
chr16:45813903-45813483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
72-499
               

               
Cow position:
               
chr16:34153780-34153344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
73-406
               

               
Cow position:
               
chr16:5256795-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
175, 116
               

               
Conread position:
               
73-474
               

               
Cow position:
               
chr16:56850138-56850548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
73-487
               

               
Cow position:
               
chr16:45677774-45678190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
73-492
               

               
Cow position:
               
chr16:33753228-33753651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
172, 86
               

               
Conread position:
               
74-256
               

               
Cow position:
               
chr16:45107687-45107865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 130
               

               
Conread position:
               
74-338
               

               
Cow position:
               
chr16:39237743-39238005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
198, 100
               

               
Conread position:
               
74-477
               

               
Cow position:
               
chr16:52275330-52274932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
75-406
               

               
Cow position:
               
chr16:17626731-17627058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
75-485
               

               
Cow position:
               
chr16:14685588-14685180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
76-346
               

               
Cow position:
               
chr16:10352669-10352949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
172, 129
               

               
Conread position:
               
76-408
               

               
Cow position:
               
chr16:41697289-41696963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
78-483
               

               
Cow position:
               
chr16:24855344-24855742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr16:42217883-42217604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr16:425008-424617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
81-470
               

               
Cow position:
               
chr16:41530484-41530112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
82-461
               

               
Cow position:
               
chr16:20205260-20205651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 162
               

               
Conread position:
               
82-476
               

               
Cow position:
               
chr16:3821341-3821732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
85-418
               

               
Cow position:
               
chr16:11806483-11806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
164, 125
               

               
Conread position:
               
86-257
               

               
Cow position:
               
chr16:53037812-53037649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
89-340
               

               
Cow position:
               
chr16:21369295-21369545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
90-408
               

               
Cow position:
               
chr16:17282483-17282789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
91-404
               

               
Cow position:
               
chr16:17288758-17289073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
91-472
               

               
Cow position:
               
chr16:51500753-51501126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
91-474
               

               
Cow position:
               
chr16:6887633-6887248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
95-472
               

               
Cow position:
               
chr16:3047520-3047144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
95-472
               

               
Cow position:
               
chr16:4275920-4275544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
155, 19
               

               
Conread position:
               
95-479
               

               
Cow position:
               
chr16:8231537-8231158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
96-383
               

               
Cow position:
               
chr16:5836404-5836690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 24
               

               
Conread position:
               
99-446
               

               
Cow position:
               
chr16:47964996-47964649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
99-472
               

               
Cow position:
               
chr16:7442281-7441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 114
               

               
Conread position:
               
103-391
               

               
Cow position:
               
chr16:31348942-31348653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 102
               

               
Conread position:
               
104-341
               

               
Cow position:
               
chr16:1725258-1725012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
106-361
               

               
Cow position:
               
chr16:20069656-20069914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
106-383
               

               
Cow position:
               
chr16:42345775-42345508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
180, 104
               

               
Conread position:
               
106-498
               

               
Cow position:
               
chr16:44744310-44743906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr16:4902419-4902655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 57
               

               
Conread position:
               
108-361
               

               
Cow position:
               
chr16:10592265-10592513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
133, 97
               

               
Conread position:
               
108-395
               

               
Cow position:
               
chr16:52133685-52133400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
108-486
               

               
Cow position:
               
chr16:34257210-34256821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
108-495
               

               
Cow position:
               
chr16:7418214-7418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
112-359
               

               
Cow position:
               
chr16:53891947-53891706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
185, 98
               

               
Conread position:
               
114-474
               

               
Cow position:
               
chr16:3303868-3304236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
172, 75
               

               
Conread position:
               
116-365
               

               
Cow position:
               
chr16:18402526-18402773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr16:7549806-7550096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
116-430
               

               
Cow position:
               
chr16:25386819-25387130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 73
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr16:42734175-42733804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
118-407
               

               
Cow position:
               
chr16:17945362-17945649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
118-484
               

               
Cow position:
               
chr16:22380515-22380152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
119-509
               

               
Cow position:
               
chr16:38243821-38243428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
120-470
               

               
Cow position:
               
chr16:8240023-8239668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 87
               

               
Conread position:
               
120-470
               

               
Cow position:
               
chr16:51246790-51247141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
120-490
               

               
Cow position:
               
chr16:29712262-29712632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
121-489
               

               
Cow position:
               
chr16:33198591-33198217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 89
               

               
Conread position:
               
121-547
               

               
Cow position:
               
chr16:12320065-12320497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
122-419
               

               
Cow position:
               
chr16:7504932-7505226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
123-474
               

               
Cow position:
               
chr16:32970233-32969882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 87
               

               
Conread position:
               
123-486
               

               
Cow position:
               
chr16:48493024-48493374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 82
               

               
Conread position:
               
140-445
               

               
Cow position:
               
chr16:41578088-41578397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
117, 70
               

               
Conread position:
               
140-485
               

               
Cow position:
               
chr16:9904955-9905307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr16:10504699-10505000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
150-527
               

               
Cow position:
               
chr16:8737937-8738321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
161-421
               

               
Cow position:
               
chr16:17903766-17903500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
177-406
               

               
Cow position:
               
chr16:21039927-21040157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
177-491
               

               
Cow position:
               
chr16:40514581-40514277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
177-492
               

               
Cow position:
               
chr16:45121938-45122260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
185-486
               

               
Cow position:
               
chr16:19052547-19052846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
190-477
               

               
Cow position:
               
chr16:28879852-28880135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
192-475
               

               
Cow position:
               
chr16:17135145-17134860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
192-492
               

               
Cow position:
               
chr16:33134856-33135147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
195-455
               

               
Cow position:
               
chr16:2417678-2417405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr16:34220110-34220315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 173
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr16:8017894-8018181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
209-518
               

               
Cow position:
               
chr16:8242993-8242684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
211-482
               

               
Cow position:
               
chr16:9552989-9553257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
211-489
               

               
Cow position:
               
chr16:30305886-30305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
211-492
               

               
Cow position:
               
chr16:11135054-11134767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
216-489
               

               
Cow position:
               
chr16:20824417-20824693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
254-466
               

               
Cow position:
               
chr16:32893601-32893811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
265-470
               

               
Cow position:
               
chr16:7546843-7546640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
265-476
               

               
Cow position:
               
chr16:1582943-1582727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
270-477
               

               
Cow position:
               
chr16:12324443-12324657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr16:31484674-31484453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
271-486
               

               
Cow position:
               
chr16:14376771-14376993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
276-460
               

               
Cow position:
               
chr16:34205070-34204879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
291-501
               

               
Cow position:
               
chr16:19478753-19478541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
295-491
               

               
Cow position:
               
chr16:33290400-33290602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr16:53451721-53451933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
298-490
               

               
Cow position:
               
chr16:15252033-15251846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
298-490
               

               
Cow position:
               
chr16:56615484-56615288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 184
               

               
Conread position:
               
305-466
               

               
Cow position:
               
chr16:51143825-51143991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr16:6026972-6026784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
305-499
               

               
Cow position:
               
chr16:38581028-38581228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 179
               

               
Conread position:
               
306-497
               

               
Cow position:
               
chr16:8810067-8809874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
309-527
               

               
Cow position:
               
chr16:30646542-30646763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               
Show alignments to all cow chromosomes.