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Cow genome map

           
Conread name:
           
Ss1.1-Pig1-46K21.5
        

               
Conread position:
               
10-246
               

               
Cow position:
               
chr24:19658261-19658496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
14-246
               

               
Cow position:
               
chr24:27941290-27941070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr24:25677752-25678080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 14
               

               
Conread position:
               
14-475
               

               
Cow position:
               
chr24:7913716-7914185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
153, 14
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr24:31036077-31036499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
20-314
               

               
Cow position:
               
chr24:39219123-39218831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
25-163
               

               
Cow position:
               
chr24:24002706-24002840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
25-207
               

               
Cow position:
               
chr24:2730842-2730664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
25-283
               

               
Cow position:
               
chr24:18390560-18390316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
25-475
               

               
Cow position:
               
chr24:10671112-10671573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
25-481
               

               
Cow position:
               
chr24:3493621-3494063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
259, 10
               

               
Conread position:
               
26-361
               

               
Cow position:
               
chr24:32205065-32204738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
26-407
               

               
Cow position:
               
chr24:18741842-18741467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
26-474
               

               
Cow position:
               
chr24:28062674-28063125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
26-491
               

               
Cow position:
               
chr24:18485271-18484800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
26-499
               

               
Cow position:
               
chr24:24491285-24490826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
28-475
               

               
Cow position:
               
chr24:28496857-28496407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
28-490
               

               
Cow position:
               
chr24:3165552-3166008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 7
               

               
Conread position:
               
34-474
               

               
Cow position:
               
chr24:27844784-27844358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 84
               

               
Conread position:
               
35-163
               

               
Cow position:
               
chr24:15666672-15666545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
35-167
               

               
Cow position:
               
chr24:15288594-15288726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-266
               

               
Cow position:
               
chr24:42380965-42380752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
35-284
               

               
Cow position:
               
chr24:11876620-11876865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
215, 87
               

               
Conread position:
               
35-341
               

               
Cow position:
               
chr24:20024344-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
126, 179
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr24:27341287-27340977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
218, 130
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr24:44808981-44809292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
35-354
               

               
Cow position:
               
chr24:30545119-30544816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
274, 88
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr24:45004691-45005004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
203, 96
               

               
Conread position:
               
35-365
               

               
Cow position:
               
chr24:29673256-29673584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr24:6149767-6150088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
228, 16
               

               
Conread position:
               
35-397
               

               
Cow position:
               
chr24:29063909-29063564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
262, 44
               

               
Conread position:
               
35-405
               

               
Cow position:
               
chr24:5754578-5754938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 53
               

               
Conread position:
               
35-408
               

               
Cow position:
               
chr24:43200537-43200170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
35-445
               

               
Cow position:
               
chr24:20874413-20874826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 175
               

               
Conread position:
               
35-463
               

               
Cow position:
               
chr24:15246899-15246494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
35-470
               

               
Cow position:
               
chr24:30314299-30313858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 172
               

               
Conread position:
               
35-470
               

               
Cow position:
               
chr24:39226735-39227144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
35-472
               

               
Cow position:
               
chr24:25885421-25884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
35-474
               

               
Cow position:
               
chr24:18732386-18731933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr24:25320726-25321161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
126, 173
               

               
Conread position:
               
35-475
               

               
Cow position:
               
chr24:33098751-33098296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
35-479
               

               
Cow position:
               
chr24:37650407-37650855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 75
               

               
Conread position:
               
35-479
               

               
Cow position:
               
chr24:43370985-43371423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
35-483
               

               
Cow position:
               
chr24:15057139-15057568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
35-483
               

               
Cow position:
               
chr24:19466196-19465727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
35-484
               

               
Cow position:
               
chr24:39483210-39483648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 171
               

               
Conread position:
               
37-486
               

               
Cow position:
               
chr24:17860512-17860076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
38-345
               

               
Cow position:
               
chr24:7001325-7001028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
38-490
               

               
Cow position:
               
chr24:32054412-32054849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 84
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr24:34532864-34533041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
39-344
               

               
Cow position:
               
chr24:38347421-38347714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
39-455
               

               
Cow position:
               
chr24:32693443-32693877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
171, 133
               

               
Conread position:
               
39-475
               

               
Cow position:
               
chr24:35675284-35675707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 107
               

               
Conread position:
               
39-490
               

               
Cow position:
               
chr24:23695156-23694720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
39-491
               

               
Cow position:
               
chr24:40300895-40301351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
39-492
               

               
Cow position:
               
chr24:43028585-43028134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
217, 122
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr24:32823044-32822704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 229
               

               
Conread position:
               
42-365
               

               
Cow position:
               
chr24:201893-201575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
44-500
               

               
Cow position:
               
chr24:18343794-18344266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
45-360
               

               
Cow position:
               
chr24:7079532-7079840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
45-361
               

               
Cow position:
               
chr24:40129867-40130186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
45-476
               

               
Cow position:
               
chr24:19535501-19535075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
51-208
               

               
Cow position:
               
chr24:40184376-40184532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 118
               

               
Conread position:
               
51-499
               

               
Cow position:
               
chr24:27299925-27300360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
254, 9
               

               
Conread position:
               
58-338
               

               
Cow position:
               
chr24:6487680-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
191, 37
               

               
Conread position:
               
61-253
               

               
Cow position:
               
chr24:27763564-27763737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
61-489
               

               
Cow position:
               
chr24:35985956-35985541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr24:27207430-27207288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
63-254
               

               
Cow position:
               
chr24:37246453-37246264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 145
               

               
Conread position:
               
63-279
               

               
Cow position:
               
chr24:28353916-28354127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
63-300
               

               
Cow position:
               
chr24:17363884-17363654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
63-313
               

               
Cow position:
               
chr24:30178001-30178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
195, 42
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr24:2391956-2392228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
104, 121
               

               
Conread position:
               
63-353
               

               
Cow position:
               
chr24:29781926-29782211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
171, 35
               

               
Conread position:
               
63-358
               

               
Cow position:
               
chr24:18025207-18024920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
207, 98
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr24:2096124-2095826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
186, 53
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr24:33724086-33723788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
63-383
               

               
Cow position:
               
chr24:27748414-27748720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chr24:24250497-24250807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
191, 51
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr24:27824229-27824550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
63-437
               

               
Cow position:
               
chr24:42345244-42344856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 219
               

               
Conread position:
               
63-445
               

               
Cow position:
               
chr24:20942934-20943306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
63-456
               

               
Cow position:
               
chr24:17407154-17407548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
63-460
               

               
Cow position:
               
chr24:31816350-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 84
               

               
Conread position:
               
63-470
               

               
Cow position:
               
chr24:18374539-18374935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 147
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr24:211746-212145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 147
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr24:17311444-17311054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
186, 67
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr24:25194031-25194442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
202, 69
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr24:34742514-34742925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
63-475
               

               
Cow position:
               
chr24:36404383-36403980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
196, 147
               

               
Conread position:
               
63-480
               

               
Cow position:
               
chr24:17104801-17104391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 51
               

               
Conread position:
               
63-482
               

               
Cow position:
               
chr24:27906199-27906620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
63-484
               

               
Cow position:
               
chr24:34761658-34762081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 142
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr24:17285233-17284794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 240
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr24:26929184-26928753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
63-486
               

               
Cow position:
               
chr24:27039803-27040237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
113, 127
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr24:5141705-5142130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 147
               

               
Conread position:
               
63-490
               

               
Cow position:
               
chr24:42825733-42825324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 147
               

               
Conread position:
               
63-497
               

               
Cow position:
               
chr24:16994658-16995075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
63-497
               

               
Cow position:
               
chr24:38814736-38815170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
191, 54
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr24:11839943-11840386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
63-503
               

               
Cow position:
               
chr24:31811949-31812391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 148
               

               
Conread position:
               
63-507
               

               
Cow position:
               
chr24:1269569-1269984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 55
               

               
Conread position:
               
63-529
               

               
Cow position:
               
chr24:32609403-32609879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 139
               

               
Conread position:
               
64-259
               

               
Cow position:
               
chr24:12992821-12993009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 104
               

               
Conread position:
               
64-300
               

               
Cow position:
               
chr24:35794974-35794741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
163, 145
               

               
Conread position:
               
64-346
               

               
Cow position:
               
chr24:39440791-39440526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
64-350
               

               
Cow position:
               
chr24:33222174-33221894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr24:32758998-32758706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 104
               

               
Conread position:
               
64-405
               

               
Cow position:
               
chr24:11119048-11119380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
64-405
               

               
Cow position:
               
chr24:33153548-33153880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
186, 46
               

               
Conread position:
               
64-455
               

               
Cow position:
               
chr24:41755628-41756006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
178, 56
               

               
Conread position:
               
64-475
               

               
Cow position:
               
chr24:28721653-28722053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
64-485
               

               
Cow position:
               
chr24:41980899-41980473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
64-492
               

               
Cow position:
               
chr24:30235635-30236064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 161
               

               
Conread position:
               
64-522
               

               
Cow position:
               
chr24:7917603-7917156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 147
               

               
Conread position:
               
65-231
               

               
Cow position:
               
chr24:39238565-39238733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
65-283
               

               
Cow position:
               
chr24:18695388-18695595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
65-320
               

               
Cow position:
               
chr24:27052728-27052478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
65-383
               

               
Cow position:
               
chr24:31324047-31324364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
65-383
               

               
Cow position:
               
chr24:43927555-43927253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
221, 54
               

               
Conread position:
               
65-475
               

               
Cow position:
               
chr24:18474981-18474553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
65-479
               

               
Cow position:
               
chr24:33372317-33372726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 97
               

               
Conread position:
               
65-486
               

               
Cow position:
               
chr24:30229235-30229659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
176, 66
               

               
Conread position:
               
65-489
               

               
Cow position:
               
chr24:11886924-11887344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 109
               

               
Conread position:
               
65-534
               

               
Cow position:
               
chr24:10498977-10499453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 124
               

               
Conread position:
               
66-346
               

               
Cow position:
               
chr24:39842084-39841807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
179, 11
               

               
Conread position:
               
66-482
               

               
Cow position:
               
chr24:2402609-2402194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
67-346
               

               
Cow position:
               
chr24:20250135-20249854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
100, 146
               

               
Conread position:
               
68-485
               

               
Cow position:
               
chr24:27608328-27607925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 42
               

               
Conread position:
               
71-261
               

               
Cow position:
               
chr24:17159519-17159702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 140
               

               
Conread position:
               
71-461
               

               
Cow position:
               
chr24:40588586-40588983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 106
               

               
Conread position:
               
71-477
               

               
Cow position:
               
chr24:24457474-24457062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
72-273
               

               
Cow position:
               
chr24:32360754-32360553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
72-409
               

               
Cow position:
               
chr24:17955673-17955338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
106, 135
               

               
Conread position:
               
72-475
               

               
Cow position:
               
chr24:22689812-22689397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 132
               

               
Conread position:
               
73-214
               

               
Cow position:
               
chr24:18328921-18328783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 96
               

               
Conread position:
               
75-440
               

               
Cow position:
               
chr24:31359099-31359459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 114
               

               
Conread position:
               
76-266
               

               
Cow position:
               
chr24:29540133-29539948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
76-518
               

               
Cow position:
               
chr24:6102600-6103045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
77-327
               

               
Cow position:
               
chr24:39833737-39833492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 128
               

               
Conread position:
               
80-172
               

               
Cow position:
               
chr24:11769057-11769149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-474
               

               
Cow position:
               
chr24:22079239-22079638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
81-482
               

               
Cow position:
               
chr24:16509755-16510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
83-407
               

               
Cow position:
               
chr24:15373194-15373508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
86-408
               

               
Cow position:
               
chr24:34008793-34008467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
90-447
               

               
Cow position:
               
chr24:28990357-28990710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
91-504
               

               
Cow position:
               
chr24:27220300-27219883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
95-466
               

               
Cow position:
               
chr24:43635231-43635581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
131, 101
               

               
Conread position:
               
95-483
               

               
Cow position:
               
chr24:39143401-39143795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
78, 114
               

               
Conread position:
               
95-492
               

               
Cow position:
               
chr24:6132080-6131694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
157, 115
               

               
Conread position:
               
96-475
               

               
Cow position:
               
chr24:16089030-16089406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
172, 93
               

               
Conread position:
               
105-500
               

               
Cow position:
               
chr24:30897735-30897359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 98
               

               
Conread position:
               
107-502
               

               
Cow position:
               
chr24:27726208-27725801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
147, 46
               

               
Conread position:
               
108-360
               

               
Cow position:
               
chr24:19769299-19769545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
108-481
               

               
Cow position:
               
chr24:44987577-44987190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
108-489
               

               
Cow position:
               
chr24:352799-352415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
176, 97
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr24:29180698-29180948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
114-391
               

               
Cow position:
               
chr24:32070778-32071049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
116-474
               

               
Cow position:
               
chr24:41423423-41423770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
255, 82
               

               
Conread position:
               
118-493
               

               
Cow position:
               
chr24:19800662-19801035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
120-478
               

               
Cow position:
               
chr24:44041195-44040831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
121-487
               

               
Cow position:
               
chr24:18999866-19000231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
122-484
               

               
Cow position:
               
chr24:29586813-29587184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
125-484
               

               
Cow position:
               
chr24:18357230-18356872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
126-490
               

               
Cow position:
               
chr24:37037723-37038087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
147-341
               

               
Cow position:
               
chr24:43967656-43967462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chr24:389960-390295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
175-408
               

               
Cow position:
               
chr24:39791412-39791646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
177-463
               

               
Cow position:
               
chr24:29561699-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
177-499
               

               
Cow position:
               
chr24:39523572-39523251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
177-526
               

               
Cow position:
               
chr24:23863759-23863401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
195-475
               

               
Cow position:
               
chr24:37975094-37974807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
211-408
               

               
Cow position:
               
chr24:28042876-28043079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
211-477
               

               
Cow position:
               
chr24:37823432-37823702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
214-475
               

               
Cow position:
               
chr24:20364503-20364240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
215-470
               

               
Cow position:
               
chr24:27713499-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 181
               

               
Conread position:
               
248-472
               

               
Cow position:
               
chr24:33244335-33244559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
252-490
               

               
Cow position:
               
chr24:28510742-28510982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
270-469
               

               
Cow position:
               
chr24:29539966-29539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
271-472
               

               
Cow position:
               
chr24:5360683-5360884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
271-477
               

               
Cow position:
               
chr24:21834995-21834785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
271-489
               

               
Cow position:
               
chr24:22133135-22133355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
271-491
               

               
Cow position:
               
chr24:29985020-29984797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
274-485
               

               
Cow position:
               
chr24:7757739-7757955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
279-494
               

               
Cow position:
               
chr24:3412655-3412876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
288-492
               

               
Cow position:
               
chr24:18302696-18302909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 33
               
Show alignments to all cow chromosomes.