Cow genome map

Conread name: Ss1.1-Pig1-46K21.5

Conread position: 10-492
Cow position:
Alignm length: 500
Alignm identity: 320
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 199, 17

Conread position: 11-405
Cow position:
Alignm length: 409
Alignm identity: 263
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 265

Conread position: 19-519
Cow position:
Alignm length: 522
Alignm identity: 335
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 17

Conread position: 20-351
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 227, 15

Conread position: 20-484
Cow position:
Alignm length: 477
Alignm identity: 305
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 266, 8

Conread position: 21-488
Cow position:
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 25-360
Cow position:
Alignm length: 348
Alignm identity: 225
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 15

Conread position: 25-475
Cow position:
Alignm length: 467
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 10

Conread position: 25-479
Cow position:
Alignm length: 466
Alignm identity: 305
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 10

Conread position: 26-407
Cow position:
Alignm length: 389
Alignm identity: 256
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 183, 9

Conread position: 28-477
Cow position:
Alignm length: 461
Alignm identity: 292
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 7

Conread position: 35-214
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 175, 0

Conread position: 35-221
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 35-407
Cow position:
Alignm length: 378
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 16

Conread position: 35-483
Cow position:
Alignm length: 463
Alignm identity: 291
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 73

Conread position: 35-484
Cow position:
Alignm length: 460
Alignm identity: 300
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 16

Conread position: 35-499
Cow position:
Alignm length: 480
Alignm identity: 303
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 174, 137

Conread position: 38-407
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 7

Conread position: 39-331
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 39-361
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 247, 12

Conread position: 39-406
Cow position:
Alignm length: 382
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 12

Conread position: 39-408
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 172

Conread position: 39-491
Cow position:
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 40-444
Cow position:
Alignm length: 417
Alignm identity: 261
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 196, 119

Conread position: 45-283
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 211

Conread position: 45-459
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 167

Conread position: 45-475
Cow position:
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 79

Conread position: 45-484
Cow position:
Alignm length: 445
Alignm identity: 291
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 223, 6

Conread position: 45-492
Cow position:
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 6

Conread position: 46-346
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 164, 18

Conread position: 63-208
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 63-214
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 75

Conread position: 63-247
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 63-258
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 63-260
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 145

Conread position: 63-282
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 48

Conread position: 63-282
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 109

Conread position: 63-283
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 187, 50

Conread position: 63-317
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 146

Conread position: 63-322
Cow position:
Alignm length: 265
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 146, 102

Conread position: 63-407
Cow position:
Alignm length: 351
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 155

Conread position: 63-456
Cow position:
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 126

Conread position: 63-466
Cow position:
Alignm length: 410
Alignm identity: 274
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 223, 75

Conread position: 63-466
Cow position:
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 53

Conread position: 63-471
Cow position:
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 16

Conread position: 63-475
Cow position:
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 25

Conread position: 63-475
Cow position:
Alignm length: 425
Alignm identity: 276
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 68

Conread position: 63-475
Cow position:
Alignm length: 418
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 69

Conread position: 63-478
Cow position:
Alignm length: 435
Alignm identity: 286
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 179, 34

Conread position: 63-483
Cow position:
Alignm length: 432
Alignm identity: 277
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 48

Conread position: 63-488
Cow position:
Alignm length: 439
Alignm identity: 274
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 182, 69

Conread position: 63-500
Cow position:
Alignm length: 457
Alignm identity: 292
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 183, 48

Conread position: 63-500
Cow position:
Alignm length: 451
Alignm identity: 294
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 47, 37

Conread position: 64-198
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 122

Conread position: 64-278
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 191, 31

Conread position: 64-383
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 39

Conread position: 64-383
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 52

Conread position: 64-460
Cow position:
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 95

Conread position: 64-490
Cow position:
Alignm length: 429
Alignm identity: 276
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 313, 75

Conread position: 65-382
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 219, 51

Conread position: 65-383
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 187, 51

Conread position: 65-407
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 203, 145

Conread position: 65-471
Cow position:
Alignm length: 422
Alignm identity: 265
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 51

Conread position: 65-473
Cow position:
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 10

Conread position: 65-479
Cow position:
Alignm length: 420
Alignm identity: 267
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 219, 51

Conread position: 65-492
Cow position:
Alignm length: 439
Alignm identity: 290
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 219, 51

Conread position: 65-506
Cow position:
Alignm length: 454
Alignm identity: 299
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 55

Conread position: 65-527
Cow position:
Alignm length: 490
Alignm identity: 299
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 142, 58

Conread position: 66-496
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 47

Conread position: 71-311
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 140

Conread position: 71-475
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 173, 21

Conread position: 71-485
Cow position:
Alignm length: 439
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 24

Conread position: 72-258
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 104

Conread position: 72-258
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 132

Conread position: 73-483
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 316, 107

Conread position: 81-403
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 35

Conread position: 81-407
Cow position:
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 129

Conread position: 81-500
Cow position:
Alignm length: 425
Alignm identity: 266
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 27

Conread position: 81-501
Cow position:
Alignm length: 430
Alignm identity: 269
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 31

Conread position: 84-507
Cow position:
Alignm length: 433
Alignm identity: 278
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 160, 33

Conread position: 91-470
Cow position:
Alignm length: 385
Alignm identity: 256
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 83, 115

Conread position: 95-491
Cow position:
Alignm length: 405
Alignm identity: 260
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 66, 76

Conread position: 98-391
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 8

Conread position: 103-412
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 107

Conread position: 103-488
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 60

Conread position: 107-407
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 146, 100

Conread position: 109-484
Cow position:
Alignm length: 384
Alignm identity: 247
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 239, 63

Conread position: 112-383
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 21

Conread position: 114-486
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 19

Conread position: 114-514
Cow position:
Alignm length: 405
Alignm identity: 264
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 16

Conread position: 115-477
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 130, 72

Conread position: 116-438
Cow position:
Alignm length: 336
Alignm identity: 217
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 91

Conread position: 118-483
Cow position:
Alignm length: 377
Alignm identity: 252
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 131, 77

Conread position: 118-486
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 92, 71

Conread position: 118-526
Cow position:
Alignm length: 422
Alignm identity: 284
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 134, 17

Conread position: 119-491
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 138-470
Cow position:
Alignm length: 338
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 151, 33

Conread position: 145-365
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 59

Conread position: 153-474
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 144, 57

Conread position: 154-475
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 108

Conread position: 154-484
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 97, 56

Conread position: 166-475
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 44

Conread position: 176-475
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 16

Conread position: 177-408
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 30

Conread position: 183-486
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 27

Conread position: 192-488
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 57

Conread position: 193-475
Cow position:
Alignm length: 291
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 18

Conread position: 193-482
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 17

Conread position: 195-527
Cow position:
Alignm length: 343
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 48

Conread position: 209-490
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 235

Conread position: 214-471
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 239-496
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 153

Conread position: 251-407
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 271-484
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 179

Conread position: 274-489
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 119

Conread position: 289-491
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 295-492
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 72

Conread position: 305-470
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 89

Conread position: 305-474
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.