Cow genome map

Conread name: Ss1.1-Pig1-46K21.5

Conread position: 10-218
Cow position: chr29:41076291-41076085 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 117, 18

Conread position: 10-468
Cow position: chr29:21443607-21443149 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 299
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 239, 17

Conread position: 10-486
Cow position: chr29:5892584-5893056 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 10-489
Cow position: chr29:35501911-35501449 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 18

Conread position: 14-382
Cow position: chr29:5099021-5098665 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 272, 14

Conread position: 17-355
Cow position: chr29:24103813-24103468 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 194

Conread position: 18-347
Cow position: chr29:22714985-22714658 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 33

Conread position: 18-490
Cow position: chr29:25474650-25475150 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 313
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 21-208
Cow position: chr29:17668242-17668424 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 25-497
Cow position: chr29:3704452-3704001 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 311
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 142, 10

Conread position: 28-492
Cow position: chr29:12679909-12680375 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 7

Conread position: 29-412
Cow position: chr29:11704875-11705245 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 250
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 87

Conread position: 35-202
Cow position: chr29:17345-17181 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 35-205
Cow position: chr29:9686241-9686076 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 35-254
Cow position: chr29:5919565-5919352 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 35-365
Cow position: chr29:11562374-11562697 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 103

Conread position: 35-383
Cow position: chr29:17607176-17607518 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 31, 16

Conread position: 35-407
Cow position: chr29:8926699-8926334 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 124

Conread position: 35-451
Cow position: chr29:465642-465223 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 29, 16

Conread position: 35-456
Cow position: chr29:36586338-36586749 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 274
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 262, 96

Conread position: 35-474
Cow position: chr29:35406034-35405592 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 274
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 126, 72

Conread position: 35-478
Cow position: chr29:40891942-40891505 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 288
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 186

Conread position: 35-483
Cow position: chr29:3502316-3502768 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 297
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 140

Conread position: 35-486
Cow position: chr29:17222168-17222626 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 294
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 127, 171

Conread position: 35-490
Cow position: chr29:22162493-22162049 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 35-490
Cow position: chr29:32963314-32963739 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 308
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 16

Conread position: 35-492
Cow position: chr29:4875143-4874676 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 36-249
Cow position: chr29:21000402-21000608 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 15

Conread position: 36-399
Cow position: chr29:20903527-20903171 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 215, 130

Conread position: 36-455
Cow position: chr29:19389247-19389659 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 276
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 43

Conread position: 37-295
Cow position: chr29:2623718-2623468 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 214, 150

Conread position: 37-360
Cow position: chr29:650036-650356 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 31

Conread position: 38-474
Cow position: chr29:17109734-17110151 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 248, 79

Conread position: 38-533
Cow position: chr29:34773965-34773492 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 53

Conread position: 39-360
Cow position: chr29:15940875-15940552 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 124

Conread position: 39-361
Cow position: chr29:28868396-28868722 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 202, 164

Conread position: 39-364
Cow position: chr29:40166005-40166326 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 59

Conread position: 39-478
Cow position: chr29:26778648-26779079 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 39-484
Cow position: chr29:39111545-39111114 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 303
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 51

Conread position: 39-492
Cow position: chr29:1325204-1325662 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 302
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 198, 23

Conread position: 40-477
Cow position: chr29:7041070-7040667 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 292
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 11

Conread position: 45-257
Cow position: chr29:3502826-3503033 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 64

Conread position: 45-359
Cow position: chr29:43495829-43496116 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 6

Conread position: 45-361
Cow position: chr29:87253-86932 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 14, 163

Conread position: 45-491
Cow position: chr29:4480407-4479953 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 166

Conread position: 48-214
Cow position: chr29:16756827-16756995 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 56-475
Cow position: chr29:19762053-19762462 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 148

Conread position: 60-360
Cow position: chr29:37961193-37960898 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 56

Conread position: 60-486
Cow position: chr29:10838735-10839150 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 226, 56

Conread position: 61-208
Cow position: chr29:37785393-37785240 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 61-404
Cow position: chr29:36216903-36217236 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 225, 65

Conread position: 61-405
Cow position: chr29:28166432-28166097 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 149

Conread position: 63-163
Cow position: chr29:22720915-22721014 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 63-200
Cow position: chr29:23155038-23155172 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 63-215
Cow position: chr29:2532849-2533003 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 134, 0

Conread position: 63-252
Cow position: chr29:4065875-4066055 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 186, 10

Conread position: 63-253
Cow position: chr29:7408101-7407919 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 63-268
Cow position: chr29:45650556-45650357 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 50

Conread position: 63-282
Cow position: chr29:8125807-8125591 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 173, 142

Conread position: 63-299
Cow position: chr29:43312008-43311777 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 190, 56

Conread position: 63-300
Cow position: chr29:39642964-39643192 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 45

Conread position: 63-316
Cow position: chr29:28446472-28446215 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 147, 161

Conread position: 63-332
Cow position: chr29:19792493-19792226 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 146

Conread position: 63-347
Cow position: chr29:26615937-26615655 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 57

Conread position: 63-354
Cow position: chr29:41811790-41811518 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 187, 33

Conread position: 63-355
Cow position: chr29:18072717-18073012 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 122, 158

Conread position: 63-358
Cow position: chr29:26673118-26672835 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 126, 52

Conread position: 63-360
Cow position: chr29:13553920-13554214 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 146, 57

Conread position: 63-360
Cow position: chr29:39567475-39567760 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 50

Conread position: 63-361
Cow position: chr29:868560-868854 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 68

Conread position: 63-361
Cow position: chr29:2984672-2984969 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 52

Conread position: 63-361
Cow position: chr29:4367508-4367805 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 53

Conread position: 63-379
Cow position: chr29:23984175-23983857 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 147

Conread position: 63-383
Cow position: chr29:45005831-45005527 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 183, 32

Conread position: 63-388
Cow position: chr29:463866-463545 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 50

Conread position: 63-407
Cow position: chr29:40096744-40097089 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 129, 117

Conread position: 63-407
Cow position: chr29:40852720-40853053 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 178, 111

Conread position: 63-439
Cow position: chr29:29974829-29975202 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 224, 18

Conread position: 63-455
Cow position: chr29:18735855-18735470 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 192, 69

Conread position: 63-470
Cow position: chr29:24952472-24952881 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 205, 147

Conread position: 63-472
Cow position: chr29:40763897-40763500 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 123

Conread position: 63-473
Cow position: chr29:43328426-43328829 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 186, 59

Conread position: 63-474
Cow position: chr29:28195729-28195335 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 69

Conread position: 63-475
Cow position: chr29:14501378-14501794 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 280
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 189, 109

Conread position: 63-475
Cow position: chr29:19428451-19428849 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 272
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 98, 40

Conread position: 63-475
Cow position: chr29:28197220-28196821 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 64

Conread position: 63-475
Cow position: chr29:41530637-41531050 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 273
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 53

Conread position: 63-476
Cow position: chr29:22778394-22777981 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 277
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 99, 143

Conread position: 63-477
Cow position: chr29:36530651-36531067 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 147

Conread position: 63-478
Cow position: chr29:16657473-16657893 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 26

Conread position: 63-482
Cow position: chr29:732405-732817 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 86

Conread position: 63-482
Cow position: chr29:2744484-2744064 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 208, 53

Conread position: 63-483
Cow position: chr29:20674017-20673602 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 103, 57

Conread position: 63-483
Cow position: chr29:23844619-23845046 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 169, 133

Conread position: 63-484
Cow position: chr29:24624035-24624449 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 286
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 184, 89

Conread position: 63-490
Cow position: chr29:27833775-27834205 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 280
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 98, 68

Conread position: 63-492
Cow position: chr29:19949097-19949523 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 98

Conread position: 63-495
Cow position: chr29:9709486-9709914 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 32

Conread position: 63-496
Cow position: chr29:40117356-40117783 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 81

Conread position: 63-497
Cow position: chr29:11915604-11916042 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 106

Conread position: 63-498
Cow position: chr29:4120633-4121075 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 45

Conread position: 63-499
Cow position: chr29:42364229-42363795 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 25

Conread position: 63-500
Cow position: chr29:35458983-35458545 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 297
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 193, 39

Conread position: 63-525
Cow position: chr29:4520123-4520577 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 53

Conread position: 63-530
Cow position: chr29:3237570-3237093 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 322
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 75

Conread position: 64-407
Cow position: chr29:26654252-26653916 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 146

Conread position: 64-421
Cow position: chr29:1556721-1557074 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 181, 43

Conread position: 64-460
Cow position: chr29:10456764-10456396 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 222, 52

Conread position: 65-407
Cow position: chr29:19338769-19339128 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 101

Conread position: 65-486
Cow position: chr29:31489109-31489534 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 282
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 219, 42

Conread position: 66-491
Cow position: chr29:31928769-31929201 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 67-465
Cow position: chr29:30440717-30441128 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 41

Conread position: 67-481
Cow position: chr29:25737624-25737209 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 53

Conread position: 67-500
Cow position: chr29:23697770-23698195 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 279
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 49

Conread position: 71-489
Cow position: chr29:22690015-22690440 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 280
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 111

Conread position: 72-360
Cow position: chr29:41364906-41365187 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 89, 38

Conread position: 72-499
Cow position: chr29:1022086-1022518 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 269
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 140

Conread position: 73-347
Cow position: chr29:43009287-43009019 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 199, 56

Conread position: 73-408
Cow position: chr29:27588716-27589051 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 53

Conread position: 75-206
Cow position: chr29:26985024-26985155 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 75-475
Cow position: chr29:11433922-11434311 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 265
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 43

Conread position: 75-480
Cow position: chr29:29056980-29057383 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 270
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 35

Conread position: 75-484
Cow position: chr29:22613227-22613630 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 26

Conread position: 76-441
Cow position: chr29:9718972-9718610 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 173, 112

Conread position: 76-445
Cow position: chr29:3100461-3100096 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 135

Conread position: 76-483
Cow position: chr29:25091910-25092314 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 15

Conread position: 76-492
Cow position: chr29:10818636-10818244 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 287, 42

Conread position: 76-499
Cow position: chr29:16609538-16609972 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 280
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 130

Conread position: 77-266
Cow position: chr29:19125145-19125325 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 29

Conread position: 77-490
Cow position: chr29:26275415-26275815 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 195, 80

Conread position: 81-465
Cow position: chr29:26259281-26259665 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 262
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 8

Conread position: 83-361
Cow position: chr29:30188533-30188273 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 50

Conread position: 84-392
Cow position: chr29:32211251-32210960 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 202, 126

Conread position: 95-361
Cow position: chr29:10235310-10235055 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 166, 39

Conread position: 95-378
Cow position: chr29:5186679-5186396 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 152, 76

Conread position: 95-407
Cow position: chr29:23244064-23243751 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 156, 109

Conread position: 96-475
Cow position: chr29:43099925-43099549 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 164, 36

Conread position: 96-483
Cow position: chr29:37618126-37618514 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 259
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 157, 24

Conread position: 103-361
Cow position: chr29:44682273-44682025 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 183, 77

Conread position: 108-361
Cow position: chr29:9912001-9912255 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 142, 97

Conread position: 108-408
Cow position: chr29:24252067-24252363 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 179, 107

Conread position: 108-456
Cow position: chr29:27826354-27826685 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 59

Conread position: 108-470
Cow position: chr29:4085148-4085490 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 181, 57

Conread position: 108-483
Cow position: chr29:29769522-29769146 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 102

Conread position: 108-492
Cow position: chr29:10018402-10018783 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 251
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 5, 86

Conread position: 110-492
Cow position: chr29:29942902-29942511 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 255
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 98

Conread position: 112-474
Cow position: chr29:22029106-22028763 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 157, 55

Conread position: 114-483
Cow position: chr29:31674465-31674837 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 134, 96

Conread position: 116-474
Cow position: chr29:10058699-10058345 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 135, 93

Conread position: 116-475
Cow position: chr29:17296968-17297337 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 97

Conread position: 116-491
Cow position: chr29:35291927-35292302 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 134, 79

Conread position: 121-484
Cow position: chr29:12025629-12025265 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 242
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 85

Conread position: 123-345
Cow position: chr29:29795544-29795319 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 90

Conread position: 124-347
Cow position: chr29:29314810-29314587 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 125, 82

Conread position: 137-316
Cow position: chr29:31594272-31594093 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 70

Conread position: 139-360
Cow position: chr29:27329752-27329971 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 71

Conread position: 148-463
Cow position: chr29:34359111-34358792 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 57

Conread position: 177-384
Cow position: chr29:24578756-24578966 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 34

Conread position: 177-500
Cow position: chr29:1007714-1008043 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 33

Conread position: 195-483
Cow position: chr29:21665997-21666293 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 60

Conread position: 196-475
Cow position: chr29:36952387-36952113 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 12

Conread position: 202-407
Cow position: chr29:23220584-23220377 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 162

Conread position: 207-483
Cow position: chr29:4492363-4492638 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 45

Conread position: 210-502
Cow position: chr29:41112949-41112661 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 77, 39

Conread position: 211-486
Cow position: chr29:20770270-20770555 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 109

Conread position: 219-408
Cow position: chr29:38978464-38978657 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 134

Conread position: 219-474
Cow position: chr29:38980136-38979882 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 35

Conread position: 219-475
Cow position: chr29:44139311-44139046 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 131

Conread position: 229-456
Cow position: chr29:23825270-23825032 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 248-486
Cow position: chr29:4070590-4070834 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 63

Conread position: 253-460
Cow position: chr29:32197664-32197878 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 264-500
Cow position: chr29:7290755-7290994 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 23, 179

Conread position: 266-489
Cow position: chr29:29308591-29308369 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 132

Conread position: 271-456
Cow position: chr29:22723587-22723776 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 174

Conread position: 271-474
Cow position: chr29:9378623-9378833 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 271-475
Cow position: chr29:26540554-26540341 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 271-487
Cow position: chr29:31651397-31651613 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 109

Conread position: 272-475
Cow position: chr29:36781317-36781111 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 125

Conread position: 298-485
Cow position: chr29:32215725-32215913 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 12

Conread position: 298-491
Cow position: chr29:14576875-14577072 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 304-478
Cow position: chr29:17282090-17282265 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 119

Conread position: 305-491
Cow position: chr29:4441181-4440989 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.