Cow genome map


           Conread name:
           Ss1.1-Pig1-65M15.5.5
        

               Conread position:
               11-157
               

               Cow position:
               chr9:59071846-59071992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               127
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-294
               

               Cow position:
               chr9:59072984-59073125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               291-435
               

               Cow position:
               chr9:59073936-59074077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               440-620
               

               Cow position:
               chr9:59074549-59074729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               618-735
               

               Cow position:
               chr9:59075413-59075530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               725-905
               

               Cow position:
               chr9:59075953-59076132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               902-1084
               

               Cow position:
               chr9:59077663-59077845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1086-1187
               

               Cow position:
               chr9:59080887-59080988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1184-1303
               

               Cow position:
               chr9:59082248-59082368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 0
               
Show alignments to all cow chromosomes.