Cow genome map
| Conread name: | Ss1.1-Pig1-74N02.5 |
| Conread position: | 1-204 |
| Cow position: | chr1:62291800-62291596 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 1-204 |
| Cow position: | chr1:89230337-89230126 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 1-208 |
| Cow position: | chr1:89349853-89350074 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-215 |
| Cow position: | chr1:91875018-91874801 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 160 |
| Conread position: | 1-221 |
| Cow position: | chr1:70380255-70380021 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 1-224 |
| Cow position: | chr1:5135803-5135587 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 147, 42 |
| Conread position: | 1-225 |
| Cow position: | chr1:3790175-3789942 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 109 |
| Conread position: | 1-226 |
| Cow position: | chr1:68845266-68845041 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 1-230 |
| Cow position: | chr1:85647891-85647651 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 199 |
| Conread position: | 1-231 |
| Cow position: | chr1:84255654-84255901 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-233 |
| Cow position: | chr1:3167178-3166942 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 1-235 |
| Cow position: | chr1:45553353-45553105 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-249 |
| Cow position: | chr1:47233588-47233329 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 51, 256 |
| Conread position: | 1-256 |
| Cow position: | chr1:52039527-52039793 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 72, 52 |
| Conread position: | 1-269 |
| Cow position: | chr1:53458587-53458871 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 264 |
| Conread position: | 1-270 |
| Cow position: | chr1:7023011-7023292 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 268 |
| Conread position: | 1-273 |
| Cow position: | chr1:87197718-87197997 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 1-284 |
| Cow position: | chr1:62964169-62964456 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 1-284 |
| Cow position: | chr1:89388234-89388531 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 1-285 |
| Cow position: | chr1:75744751-75745049 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 51, 284 |
| Conread position: | 1-286 |
| Cow position: | chr1:6077789-6078090 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 1-286 |
| Cow position: | chr1:78857430-78857136 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 1-286 |
| Cow position: | chr1:97954568-97954293 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 1-287 |
| Cow position: | chr1:484575-484272 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 1-287 |
| Cow position: | chr1:10632939-10633231 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 240 |
| Conread position: | 1-287 |
| Cow position: | chr1:24133167-24132872 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 1-287 |
| Cow position: | chr1:25383553-25383860 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 1-287 |
| Cow position: | chr1:40599934-40600216 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 205 |
| Conread position: | 1-287 |
| Cow position: | chr1:56618760-56618465 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 1-287 |
| Cow position: | chr1:71079067-71078771 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-287 |
| Cow position: | chr1:72011918-72011631 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 1-287 |
| Cow position: | chr1:82936695-82936414 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 144, 46 |
| Conread position: | 1-289 |
| Cow position: | chr1:17196739-17196432 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-289 |
| Cow position: | chr1:99609257-99609560 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-290 |
| Cow position: | chr1:3323762-3324068 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 1-290 |
| Cow position: | chr1:20104159-20104460 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-290 |
| Cow position: | chr1:22728942-22729248 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 297 |
| Conread position: | 1-290 |
| Cow position: | chr1:41138241-41137954 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 1-290 |
| Cow position: | chr1:43855192-43855483 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 1-290 |
| Cow position: | chr1:45555255-45555559 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 211 |
| Conread position: | 1-290 |
| Cow position: | chr1:48105543-48105231 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 1-290 |
| Cow position: | chr1:57575868-57575570 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 1-290 |
| Cow position: | chr1:61884810-61885106 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 1-290 |
| Cow position: | chr1:73546011-73545714 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 1-290 |
| Cow position: | chr1:98059940-98060253 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 1-290 |
| Cow position: | chr1:101860598-101860293 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 1-291 |
| Cow position: | chr1:50931085-50930785 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 1-291 |
| Cow position: | chr1:69551593-69551284 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 1-291 |
| Cow position: | chr1:70434894-70435181 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 1-291 |
| Cow position: | chr1:73960596-73960881 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 51, 176 |
| Conread position: | 1-291 |
| Cow position: | chr1:78794334-78794041 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 1-291 |
| Cow position: | chr1:97090218-97090512 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 1-291 |
| Cow position: | chr1:100761966-100762269 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 51, 246 |
| Conread position: | 1-292 |
| Cow position: | chr1:53622851-53623150 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 53, 200 |
| Conread position: | 1-296 |
| Cow position: | chr1:96136377-96136683 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 1-298 |
| Cow position: | chr1:197113-196804 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-298 |
| Cow position: | chr1:29935489-29935189 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 1-298 |
| Cow position: | chr1:36998086-36998384 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 146, 52 |
| Conread position: | 1-298 |
| Cow position: | chr1:68817908-68817598 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 290 |
| Conread position: | 1-300 |
| Cow position: | chr1:51445771-51446086 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 255 |
| Conread position: | 1-300 |
| Cow position: | chr1:84104162-84103854 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 1-300 |
| Cow position: | chr1:89510031-89509724 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 1-303 |
| Cow position: | chr1:81613280-81613601 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 285 |
| Conread position: | 1-304 |
| Cow position: | chr1:64572404-64572724 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-304 |
| Cow position: | chr1:70538498-70538814 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 247 |
| Conread position: | 1-307 |
| Cow position: | chr1:89381165-89381485 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-308 |
| Cow position: | chr1:83072334-83072654 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 1-313 |
| Cow position: | chr1:4414317-4414012 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 1-313 |
| Cow position: | chr1:26934370-26934049 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 1-313 |
| Cow position: | chr1:42175615-42175944 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 1-313 |
| Cow position: | chr1:54258455-54258785 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 183 |
| Conread position: | 1-313 |
| Cow position: | chr1:56225357-56225684 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 288 |
| Conread position: | 1-313 |
| Cow position: | chr1:64804211-64803881 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 323 |
| Conread position: | 1-313 |
| Cow position: | chr1:71295418-71295086 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 1-313 |
| Cow position: | chr1:81569140-81568813 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 45, 315 |
| Conread position: | 1-313 |
| Cow position: | chr1:91023577-91023251 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 1-314 |
| Cow position: | chr1:85339295-85339594 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 1-314 |
| Cow position: | chr1:86110840-86110528 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 1-315 |
| Cow position: | chr1:79640400-79640070 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-325 |
| Cow position: | chr1:78810930-78811270 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-290 |
| Cow position: | chr1:78091927-78092234 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-212 |
| Cow position: | chr1:19227162-19226944 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 3-266 |
| Cow position: | chr1:22827060-22827316 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 3-286 |
| Cow position: | chr1:42887372-42887090 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 3-298 |
| Cow position: | chr1:55229878-55230175 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 4-226 |
| Cow position: | chr1:74822349-74822580 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 4-230 |
| Cow position: | chr1:71253659-71253423 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 4-235 |
| Cow position: | chr1:37886916-37886678 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 139 |
| Conread position: | 4-276 |
| Cow position: | chr1:65028423-65028701 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 20, 218 |
| Conread position: | 4-278 |
| Cow position: | chr1:53397885-53398155 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 4-287 |
| Cow position: | chr1:3923901-3923613 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 235 |
| Conread position: | 4-290 |
| Cow position: | chr1:33720013-33720298 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 4-291 |
| Cow position: | chr1:33206977-33206679 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 95, 49 |
| Conread position: | 4-298 |
| Cow position: | chr1:35162303-35162607 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 226 |
| Conread position: | 4-312 |
| Cow position: | chr1:41056576-41056896 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 5-298 |
| Cow position: | chr1:86682668-86682365 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 216 |
| Conread position: | 8-199 |
| Cow position: | chr1:20204926-20205127 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-208 |
| Cow position: | chr1:12978578-12978791 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-285 |
| Cow position: | chr1:78838696-78838976 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 8-287 |
| Cow position: | chr1:43389152-43388863 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 8-290 |
| Cow position: | chr1:1981216-1980916 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 8-290 |
| Cow position: | chr1:43505422-43505718 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 241 |
| Conread position: | 8-290 |
| Cow position: | chr1:81477972-81477669 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 8-290 |
| Cow position: | chr1:101634602-101634893 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 8-298 |
| Cow position: | chr1:41696956-41697256 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-299 |
| Cow position: | chr1:96277157-96276849 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 244 |
| Conread position: | 8-305 |
| Cow position: | chr1:55705352-55705038 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 44, 267 |
| Conread position: | 8-312 |
| Cow position: | chr1:37322104-37321793 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 220 |
| Conread position: | 9-290 |
| Cow position: | chr1:7739853-7740137 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 227 |
| Conread position: | 10-283 |
| Cow position: | chr1:6958776-6959066 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 187 |
| Conread position: | 10-287 |
| Cow position: | chr1:6941363-6941657 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 187 |
| Conread position: | 11-218 |
| Cow position: | chr1:82884489-82884276 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 168 |
| Conread position: | 11-228 |
| Cow position: | chr1:18780434-18780198 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 11-235 |
| Cow position: | chr1:77232667-77232444 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 11-235 |
| Cow position: | chr1:98551617-98551857 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 203 |
| Conread position: | 11-285 |
| Cow position: | chr1:22730646-22730922 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 136, 45 |
| Conread position: | 11-285 |
| Cow position: | chr1:93528599-93528883 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 220 |
| Conread position: | 11-286 |
| Cow position: | chr1:20950622-20950907 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 11-286 |
| Cow position: | chr1:89448798-89449088 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 41, 251 |
| Conread position: | 11-287 |
| Cow position: | chr1:8523-8809 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 11-287 |
| Cow position: | chr1:31795102-31794815 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 11-287 |
| Cow position: | chr1:58754894-58754607 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 11-287 |
| Cow position: | chr1:61742067-61741773 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 11-287 |
| Cow position: | chr1:96964221-96964510 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 11-287 |
| Cow position: | chr1:100324843-100324567 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 11-287 |
| Cow position: | chr1:101789171-101788906 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 11-288 |
| Cow position: | chr1:95499592-95499304 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 11-290 |
| Cow position: | chr1:22525777-22526068 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 11-290 |
| Cow position: | chr1:54206918-54206625 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 11-290 |
| Cow position: | chr1:68855069-68855360 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 11-290 |
| Cow position: | chr1:79844365-79844673 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 11-290 |
| Cow position: | chr1:97755417-97755695 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 11-291 |
| Cow position: | chr1:74956120-74955837 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 207 |
| Conread position: | 11-291 |
| Cow position: | chr1:101834725-101835011 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 11-296 |
| Cow position: | chr1:99642465-99642170 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 11-299 |
| Cow position: | chr1:16767182-16766883 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 11-312 |
| Cow position: | chr1:81290408-81290721 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 11-312 |
| Cow position: | chr1:93499527-93499835 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 11-313 |
| Cow position: | chr1:69678421-69678109 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 11-313 |
| Cow position: | chr1:71350822-71350508 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 11-313 |
| Cow position: | chr1:88913219-88913536 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 11-314 |
| Cow position: | chr1:55429054-55428734 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 12-298 |
| Cow position: | chr1:12464764-12464463 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 14-290 |
| Cow position: | chr1:64302344-64302056 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 212 |
| Conread position: | 15-225 |
| Cow position: | chr1:83583030-83582805 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 15-290 |
| Cow position: | chr1:31934417-31934698 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 15-290 |
| Cow position: | chr1:54156827-54156540 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 15-309 |
| Cow position: | chr1:82513451-82513136 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 15-312 |
| Cow position: | chr1:98030819-98031128 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 200 |
| Conread position: | 15-313 |
| Cow position: | chr1:90621604-90621288 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 16-290 |
| Cow position: | chr1:65318484-65318771 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 17-287 |
| Cow position: | chr1:90904847-90904566 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 19-274 |
| Cow position: | chr1:13637756-13637487 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 20-281 |
| Cow position: | chr1:61005646-61005375 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 22-226 |
| Cow position: | chr1:67688668-67688454 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 22-228 |
| Cow position: | chr1:4581415-4581200 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 22-284 |
| Cow position: | chr1:89158216-89157942 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 231 |
| Conread position: | 22-313 |
| Cow position: | chr1:64678613-64678894 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 24-290 |
| Cow position: | chr1:82880558-82880825 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 204 |
| Conread position: | 24-291 |
| Cow position: | chr1:39427088-39426822 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 195 |
| Conread position: | 24-291 |
| Cow position: | chr1:49825156-49824870 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 24-300 |
| Cow position: | chr1:43352744-43352449 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 26-300 |
| Cow position: | chr1:49433345-49433057 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 26-313 |
| Cow position: | chr1:7971331-7971619 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 228 |
| Conread position: | 27-287 |
| Cow position: | chr1:101714031-101714307 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 139 |
| Conread position: | 32-243 |
| Cow position: | chr1:80841578-80841794 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 32-312 |
| Cow position: | chr1:52467223-52467501 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 188 |
| Conread position: | 32-313 |
| Cow position: | chr1:98583679-98583962 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 33-236 |
| Cow position: | chr1:62036726-62036938 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 194 |
| Conread position: | 33-313 |
| Cow position: | chr1:5597281-5596994 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 34-240 |
| Cow position: | chr1:93043947-93044158 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 40-290 |
| Cow position: | chr1:95557970-95558233 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 47-290 |
| Cow position: | chr1:3942272-3942022 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 5, 158 |
| Conread position: | 50-290 |
| Cow position: | chr1:48618297-48618053 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 50-312 |
| Cow position: | chr1:64113852-64113584 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 180 |
| Conread position: | 51-290 |
| Cow position: | chr1:80584374-80584622 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 51-292 |
| Cow position: | chr1:54267990-54267744 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 51-300 |
| Cow position: | chr1:35671486-35671740 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 51-313 |
| Cow position: | chr1:53452488-53452738 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 51-314 |
| Cow position: | chr1:52912954-52912674 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 51-320 |
| Cow position: | chr1:100852662-100852926 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 53-287 |
| Cow position: | chr1:46143517-46143276 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 173 |
| Conread position: | 53-298 |
| Cow position: | chr1:88359826-88360087 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 53-301 |
| Cow position: | chr1:3965785-3966040 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 215 |
| Conread position: | 53-313 |
| Cow position: | chr1:48206590-48206323 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 58-290 |
| Cow position: | chr1:102529906-102529659 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 61-290 |
| Cow position: | chr1:97833663-97833891 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 70-290 |
| Cow position: | chr1:6731149-6731373 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 9 |
| Conread position: | 71-290 |
| Cow position: | chr1:15333863-15334082 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 71-298 |
| Cow position: | chr1:21787305-21787526 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 72-287 |
| Cow position: | chr1:79630932-79630729 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 142, 5 |
| Conread position: | 72-290 |
| Cow position: | chr1:79003946-79004170 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 72-290 |
| Cow position: | chr1:81481413-81481191 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 75, 167 |
| Conread position: | 72-294 |
| Cow position: | chr1:85771978-85772204 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 166 |
| Conread position: | 72-298 |
| Cow position: | chr1:62997766-62998004 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 72-302 |
| Cow position: | chr1:78096896-78097133 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 73-286 |
| Cow position: | chr1:500145-500366 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 74-205 |
| Cow position: | chr1:82556436-82556306 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 74-235 |
| Cow position: | chr1:81580148-81580311 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 147 |
| Conread position: | 74-287 |
| Cow position: | chr1:41027046-41027263 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 146 |
| Conread position: | 74-290 |
| Cow position: | chr1:70828873-70829090 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 74-290 |
| Cow position: | chr1:98911980-98912202 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 74-313 |
| Cow position: | chr1:84811967-84811724 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 76-290 |
| Cow position: | chr1:27959577-27959353 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 76-290 |
| Cow position: | chr1:59518895-59519105 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 76-298 |
| Cow position: | chr1:31819084-31819305 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 157, 134 |
| Conread position: | 77-287 |
| Cow position: | chr1:82337802-82337589 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 77-296 |
| Cow position: | chr1:83025188-83024964 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 67, 8 |
| Conread position: | 77-300 |
| Cow position: | chr1:72422434-72422202 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 90 |
| Conread position: | 78-257 |
| Cow position: | chr1:19962029-19962210 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 78-298 |
| Cow position: | chr1:22823879-22824111 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 79-286 |
| Cow position: | chr1:89158724-89158518 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 79-290 |
| Cow position: | chr1:816433-816203 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 79-291 |
| Cow position: | chr1:73721336-73721559 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 80-285 |
| Cow position: | chr1:78066559-78066354 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 81-286 |
| Cow position: | chr1:79146838-79146624 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 82-290 |
| Cow position: | chr1:24530481-24530692 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 85-285 |
| Cow position: | chr1:30983510-30983303 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 85-308 |
| Cow position: | chr1:67654338-67654112 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 188 |
| Conread position: | 85-314 |
| Cow position: | chr1:55753233-55753001 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 85-314 |
| Cow position: | chr1:81858920-81858682 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 85-314 |
| Cow position: | chr1:83092857-83093084 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 58 |
| Conread position: | 87-313 |
| Cow position: | chr1:45315652-45315414 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 89-313 |
| Cow position: | chr1:759432-759197 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 211 |
| Conread position: | 90-290 |
| Cow position: | chr1:40212345-40212154 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 177, 58 |
| Conread position: | 94-290 |
| Cow position: | chr1:101439491-101439295 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 97-314 |
| Cow position: | chr1:99605193-99604974 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 50, 142 |
| Conread position: | 98-285 |
| Cow position: | chr1:242552-242741 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 98-287 |
| Cow position: | chr1:62034833-62034644 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 98-287 |
| Cow position: | chr1:68688578-68688770 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 141 |
| Conread position: | 98-287 |
| Cow position: | chr1:100474229-100474430 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 98-290 |
| Cow position: | chr1:33998754-33998943 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 98-290 |
| Cow position: | chr1:66752634-66752438 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 98-290 |
| Cow position: | chr1:100573633-100573434 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 98-300 |
| Cow position: | chr1:95835803-95835591 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 98-304 |
| Cow position: | chr1:61011176-61011383 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 123 |
| Conread position: | 98-306 |
| Cow position: | chr1:97540630-97540849 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 101-311 |
| Cow position: | chr1:7965851-7966063 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 119, 42 |
| Conread position: | 114-285 |
| Cow position: | chr1:93590575-93590401 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 114-287 |
| Cow position: | chr1:101280723-101280546 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 114-290 |
| Cow position: | chr1:50585867-50585682 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 114-290 |
| Cow position: | chr1:55685967-55685784 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 114-298 |
| Cow position: | chr1:70483323-70483133 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 114-300 |
| Cow position: | chr1:95152882-95153078 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 114-313 |
| Cow position: | chr1:71636314-71636112 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 114-313 |
| Cow position: | chr1:71946073-71945862 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 163 |
| Conread position: | 114-320 |
| Cow position: | chr1:524819-525030 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 115-313 |
| Cow position: | chr1:82537942-82538144 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 116-313 |
| Cow position: | chr1:42774924-42775122 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 7 |
| Conread position: | 117-287 |
| Cow position: | chr1:70416746-70416569 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 118-290 |
| Cow position: | chr1:23101691-23101869 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 118-313 |
| Cow position: | chr1:69378584-69378381 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 118-313 |
| Cow position: | chr1:102730747-102730537 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 119-290 |
| Cow position: | chr1:84787292-84787454 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 122-285 |
| Cow position: | chr1:102523622-102523451 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 143 |
| Conread position: | 122-287 |
| Cow position: | chr1:62469080-62469249 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 122-298 |
| Cow position: | chr1:4329881-4329707 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 123-264 |
| Cow position: | chr1:21957524-21957386 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 124-313 |
| Cow position: | chr1:11708997-11708805 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 125-290 |
| Cow position: | chr1:91743437-91743269 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 127-286 |
| Cow position: | chr1:77099096-77098937 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 128-287 |
| Cow position: | chr1:100552004-100552157 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 128-301 |
| Cow position: | chr1:93235900-93235726 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 132-290 |
| Cow position: | chr1:30028200-30028038 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 145-287 |
| Cow position: | chr1:25955941-25956087 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 145-287 |
| Cow position: | chr1:46354393-46354249 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 145-300 |
| Cow position: | chr1:41022465-41022620 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-305 |
| Cow position: | chr1:19384410-19384248 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 145-312 |
| Cow position: | chr1:89835763-89835924 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 145-313 |
| Cow position: | chr1:32014242-32014411 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 145-313 |
| Cow position: | chr1:45099806-45099972 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 145-313 |
| Cow position: | chr1:67674557-67674392 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 145-314 |
| Cow position: | chr1:98380251-98380077 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 146-313 |
| Cow position: | chr1:45019754-45019591 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 147-322 |
| Cow position: | chr1:77810711-77810537 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 149-290 |
| Cow position: | chr1:100800718-100800575 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 153-301 |
| Cow position: | chr1:95976387-95976538 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 153-306 |
| Cow position: | chr1:10470480-10470632 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 153-313 |
| Cow position: | chr1:80423678-80423515 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 156-313 |
| Cow position: | chr1:70175481-70175325 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 158-287 |
| Cow position: | chr1:1799089-1799223 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 158-290 |
| Cow position: | chr1:64811294-64811431 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 158-313 |
| Cow position: | chr1:50906621-50906465 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 144 |
| Conread position: | 159-290 |
| Cow position: | chr1:53474216-53474342 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 159-301 |
| Cow position: | chr1:15547530-15547671 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 160-309 |
| Cow position: | chr1:70476690-70476539 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 166-290 |
| Cow position: | chr1:92578766-92578640 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 188-313 |
| Cow position: | chr1:83066742-83066612 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.