Cow genome map

Conread name: Ss1.1-Pig1-74N02.5

Conread position: 1-191
Cow position: chr21:16187860-16187657 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-205
Cow position: chr21:724938-724715 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-208
Cow position: chr21:30990322-30990120 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 90

Conread position: 1-215
Cow position: chr21:45262864-45262636 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 1-230
Cow position: chr21:7581958-7581714 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1-230
Cow position: chr21:46264120-46264359 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 43

Conread position: 1-235
Cow position: chr21:29484927-29485172 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 1-235
Cow position: chr21:30250242-30250010 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 145, 41

Conread position: 1-235
Cow position: chr21:33350694-33350937 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 46

Conread position: 1-282
Cow position: chr21:31253492-31253777 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 185
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 85

Conread position: 1-284
Cow position: chr21:641534-641830 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 1-285
Cow position: chr21:4280724-4280429 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 36

Conread position: 1-286
Cow position: chr21:24598609-24598891 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 46

Conread position: 1-287
Cow position: chr21:4399751-4400042 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 88

Conread position: 1-287
Cow position: chr21:6713577-6713275 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 22

Conread position: 1-289
Cow position: chr21:3361065-3360765 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-289
Cow position: chr21:7825229-7824939 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 71

Conread position: 1-289
Cow position: chr21:10561636-10561334 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 219

Conread position: 1-290
Cow position: chr21:82027-82311 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 74

Conread position: 1-290
Cow position: chr21:3585415-3585112 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 86

Conread position: 1-290
Cow position: chr21:6051455-6051757 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-290
Cow position: chr21:11645022-11644714 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 115

Conread position: 1-290
Cow position: chr21:23822115-23822404 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 79

Conread position: 1-290
Cow position: chr21:29069381-29069071 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 1-290
Cow position: chr21:30222292-30222594 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 33

Conread position: 1-290
Cow position: chr21:30835311-30835618 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 136

Conread position: 1-290
Cow position: chr21:32297559-32297256 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 71

Conread position: 1-290
Cow position: chr21:34654025-34654322 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 8

Conread position: 1-290
Cow position: chr21:37479907-37480216 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 72, 49

Conread position: 1-290
Cow position: chr21:47714055-47713755 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 22

Conread position: 1-291
Cow position: chr21:12154087-12154378 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 77, 46

Conread position: 1-291
Cow position: chr21:29002210-29001893 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 202

Conread position: 1-293
Cow position: chr21:22860947-22861247 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 182

Conread position: 1-298
Cow position: chr21:27229846-27229543 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 207

Conread position: 1-298
Cow position: chr21:27810356-27810652 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 74

Conread position: 1-300
Cow position: chr21:643276-643588 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 17

Conread position: 1-300
Cow position: chr21:12462022-12461707 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 226

Conread position: 1-300
Cow position: chr21:28244417-28244729 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 92

Conread position: 1-300
Cow position: chr21:28919576-28919269 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 189

Conread position: 1-301
Cow position: chr21:868977-868655 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 1-306
Cow position: chr21:41621072-41621397 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 198

Conread position: 1-313
Cow position: chr21:17890251-17890578 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 56

Conread position: 1-313
Cow position: chr21:23980232-23979905 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 212
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 56

Conread position: 1-313
Cow position: chr21:32559411-32559094 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 97

Conread position: 1-313
Cow position: chr21:36910688-36911011 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 56

Conread position: 1-313
Cow position: chr21:45906673-45906347 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 17

Conread position: 1-314
Cow position: chr21:20152902-20153233 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 208

Conread position: 4-171
Cow position: chr21:13488473-13488657 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 4-212
Cow position: chr21:38121052-38121272 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 4-215
Cow position: chr21:13365289-13365516 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 4-282
Cow position: chr21:27521380-27521097 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 80

Conread position: 4-290
Cow position: chr21:37299415-37299712 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 69, 46

Conread position: 4-290
Cow position: chr21:44214075-44214363 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 107

Conread position: 4-295
Cow position: chr21:7673077-7673371 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 46

Conread position: 4-313
Cow position: chr21:44658533-44658835 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 48, 96

Conread position: 4-314
Cow position: chr21:41522456-41522136 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 103

Conread position: 4-314
Cow position: chr21:41590609-41590290 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 77, 46

Conread position: 5-205
Cow position: chr21:28442698-28442896 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 47

Conread position: 8-226
Cow position: chr21:5392585-5392350 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 8-290
Cow position: chr21:33982851-33982562 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 221

Conread position: 8-290
Cow position: chr21:44825930-44825623 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 47

Conread position: 8-307
Cow position: chr21:8349283-8349590 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 166

Conread position: 8-314
Cow position: chr21:22014142-22014466 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 44, 57

Conread position: 8-324
Cow position: chr21:30592349-30592029 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 126

Conread position: 9-291
Cow position: chr21:24858271-24858569 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 11-208
Cow position: chr21:33210160-33210355 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 65

Conread position: 11-234
Cow position: chr21:26244878-26245109 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 11-287
Cow position: chr21:32339779-32339496 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 215

Conread position: 11-290
Cow position: chr21:742246-742526 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 42

Conread position: 11-290
Cow position: chr21:10004929-10004631 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 243

Conread position: 11-290
Cow position: chr21:38449489-38449200 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 11-295
Cow position: chr21:14760532-14760812 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 44

Conread position: 11-307
Cow position: chr21:41140759-41140446 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 46

Conread position: 11-313
Cow position: chr21:22718820-22718509 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 39

Conread position: 11-313
Cow position: chr21:23535673-23535986 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 44

Conread position: 12-306
Cow position: chr21:24296802-24296497 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 41

Conread position: 13-284
Cow position: chr21:29214195-29213912 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 21

Conread position: 15-291
Cow position: chr21:21907467-21907188 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 64

Conread position: 15-313
Cow position: chr21:27569201-27568884 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 64, 19

Conread position: 15-313
Cow position: chr21:42135658-42135344 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 73

Conread position: 16-290
Cow position: chr21:20160641-20160930 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 270

Conread position: 16-291
Cow position: chr21:5898436-5898156 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 211

Conread position: 22-313
Cow position: chr21:11740152-11739843 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 29, 54

Conread position: 24-301
Cow position: chr21:14126259-14126535 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 69

Conread position: 24-313
Cow position: chr21:14452207-14452507 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 258

Conread position: 25-290
Cow position: chr21:8426424-8426695 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 18

Conread position: 25-290
Cow position: chr21:22850903-22851167 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 41

Conread position: 25-308
Cow position: chr21:28030260-28030549 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 226

Conread position: 30-307
Cow position: chr21:71565-71855 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 164

Conread position: 33-254
Cow position: chr21:9990490-9990727 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 76

Conread position: 33-313
Cow position: chr21:47719325-47719031 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 154

Conread position: 44-313
Cow position: chr21:13588755-13589037 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 51-210
Cow position: chr21:20183072-20183239 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 162

Conread position: 51-233
Cow position: chr21:30980577-30980384 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 51-281
Cow position: chr21:829211-828967 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 152

Conread position: 53-287
Cow position: chr21:802304-802074 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 94, 24

Conread position: 53-287
Cow position: chr21:36508244-36508479 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 43

Conread position: 53-312
Cow position: chr21:12104367-12104627 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 154

Conread position: 55-231
Cow position: chr21:11057870-11057689 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 66-300
Cow position: chr21:46451930-46451710 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 11

Conread position: 69-290
Cow position: chr21:17252957-17252725 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 71-290
Cow position: chr21:47465092-47464867 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 77, 101

Conread position: 72-220
Cow position: chr21:12723183-12723329 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 5

Conread position: 72-285
Cow position: chr21:20163734-20163954 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 7, 15

Conread position: 72-313
Cow position: chr21:19868927-19868689 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 77, 27

Conread position: 73-306
Cow position: chr21:24875380-24875620 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 69, 169

Conread position: 74-290
Cow position: chr21:7169717-7169939 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 74-290
Cow position: chr21:27677511-27677735 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 74-290
Cow position: chr21:36682354-36682578 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 76-290
Cow position: chr21:39403493-39403276 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 24

Conread position: 77-287
Cow position: chr21:19240841-19240629 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 70, 179

Conread position: 77-291
Cow position: chr21:44565683-44565476 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 77-297
Cow position: chr21:21615816-21616035 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 8

Conread position: 77-314
Cow position: chr21:46599395-46599634 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 10

Conread position: 79-290
Cow position: chr21:6851206-6851417 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 132

Conread position: 79-314
Cow position: chr21:19360142-19359909 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 68, 142

Conread position: 80-287
Cow position: chr21:41287758-41287547 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 80-313
Cow position: chr21:16498554-16498791 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 81-290
Cow position: chr21:39393784-39394001 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 85-290
Cow position: chr21:31279296-31279505 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 93-263
Cow position: chr21:30243633-30243460 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 120

Conread position: 95-301
Cow position: chr21:11678253-11678059 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 96-290
Cow position: chr21:15012490-15012683 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 125

Conread position: 98-287
Cow position: chr21:25014973-25014791 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 98-290
Cow position: chr21:25012135-25012330 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 96

Conread position: 98-305
Cow position: chr21:11182606-11182816 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 162

Conread position: 98-314
Cow position: chr21:40820800-40820575 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 98-322
Cow position: chr21:28907491-28907264 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 101-313
Cow position: chr21:31659091-31658879 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 134

Conread position: 103-301
Cow position: chr21:8506488-8506284 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 103-301
Cow position: chr21:8509376-8509172 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 105-315
Cow position: chr21:30657930-30658138 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 116

Conread position: 111-320
Cow position: chr21:24797723-24797935 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 194

Conread position: 112-290
Cow position: chr21:37495873-37495692 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 20

Conread position: 113-314
Cow position: chr21:13883549-13883756 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 114

Conread position: 114-309
Cow position: chr21:31462633-31462828 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 122

Conread position: 114-313
Cow position: chr21:20174387-20174586 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 108

Conread position: 125-292
Cow position: chr21:29418652-29418825 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 127-300
Cow position: chr21:21158897-21159066 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 164, 90

Conread position: 134-290
Cow position: chr21:45376040-45376199 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 144-312
Cow position: chr21:48482428-48482257 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 163

Conread position: 145-287
Cow position: chr21:8351189-8351045 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 145-290
Cow position: chr21:44732940-44732791 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 145-290
Cow position: chr21:47383441-47383297 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 90

Conread position: 145-298
Cow position: chr21:18495325-18495477 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 147, 38

Conread position: 145-298
Cow position: chr21:48334688-48334525 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 145-299
Cow position: chr21:7460711-7460866 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 145-308
Cow position: chr21:40930371-40930206 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 145-313
Cow position: chr21:36398459-36398288 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 142, 72

Conread position: 149-298
Cow position: chr21:7424906-7424754 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 140

Conread position: 152-290
Cow position: chr21:29011862-29011724 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 39

Conread position: 153-290
Cow position: chr21:16120049-16119910 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 119

Conread position: 158-289
Cow position: chr21:37110788-37110917 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 159-314
Cow position: chr21:23783724-23783571 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 146, 58

Conread position: 162-313
Cow position: chr21:11761684-11761839 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 162-314
Cow position: chr21:42341817-42341668 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 73

Conread position: 165-285
Cow position: chr21:37479469-37479343 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.