Cow genome map
| Conread name: | Ss1.1-Pig1-74N02.5 |
| Conread position: | 1-235 |
| Cow position: | chr26:31605307-31605555 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-285 |
| Cow position: | chr26:33253418-33253117 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-286 |
| Cow position: | chr26:12145218-12144916 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-287 |
| Cow position: | chr26:9491827-9492120 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 1-287 |
| Cow position: | chr26:10764122-10764416 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 1-287 |
| Cow position: | chr26:35704291-35704575 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 1-290 |
| Cow position: | chr26:647819-647518 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 1-290 |
| Cow position: | chr26:17057582-17057879 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 1-290 |
| Cow position: | chr26:18825380-18825079 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 1-296 |
| Cow position: | chr26:24240577-24240895 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 290 |
| Conread position: | 1-298 |
| Cow position: | chr26:6714392-6714086 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 1-300 |
| Cow position: | chr26:31137548-31137251 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 1-306 |
| Cow position: | chr26:26950544-26950241 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 1-307 |
| Cow position: | chr26:22892541-22892225 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 1-308 |
| Cow position: | chr26:9535419-9535735 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 1-308 |
| Cow position: | chr26:21243003-21243310 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 150 |
| Conread position: | 1-310 |
| Cow position: | chr26:31633630-31633956 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 1-310 |
| Cow position: | chr26:32897970-32897655 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 194 |
| Conread position: | 1-313 |
| Cow position: | chr26:23097276-23096961 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 1-313 |
| Cow position: | chr26:26888229-26887908 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 4-230 |
| Cow position: | chr26:13021241-13021001 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 4-286 |
| Cow position: | chr26:7687336-7687042 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 4-287 |
| Cow position: | chr26:28251054-28251355 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 267 |
| Conread position: | 4-287 |
| Cow position: | chr26:32565920-32566211 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 4-291 |
| Cow position: | chr26:12964792-12964476 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 4-313 |
| Cow position: | chr26:20291778-20291464 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 5-301 |
| Cow position: | chr26:33112477-33112170 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 8-235 |
| Cow position: | chr26:14175187-14175430 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 8-286 |
| Cow position: | chr26:27491593-27491295 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 8-286 |
| Cow position: | chr26:34724967-34724674 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 8-287 |
| Cow position: | chr26:14481640-14481365 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 8-313 |
| Cow position: | chr26:6514750-6515059 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 44, 220 |
| Conread position: | 11-231 |
| Cow position: | chr26:678068-677835 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 11-234 |
| Cow position: | chr26:23315681-23315920 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 11-290 |
| Cow position: | chr26:8811041-8811335 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 11-290 |
| Cow position: | chr26:29889586-29889310 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 11-306 |
| Cow position: | chr26:13802025-13802328 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 12-300 |
| Cow position: | chr26:3072053-3071767 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 13-290 |
| Cow position: | chr26:12893512-12893225 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 185 |
| Conread position: | 15-290 |
| Cow position: | chr26:8307607-8307327 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 15-312 |
| Cow position: | chr26:16783739-16784050 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 16-296 |
| Cow position: | chr26:23924764-23925055 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 25-306 |
| Cow position: | chr26:5836892-5836595 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 27-313 |
| Cow position: | chr26:23111971-23112266 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 33-291 |
| Cow position: | chr26:20769782-20770056 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 36-287 |
| Cow position: | chr26:20825173-20824921 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 50-315 |
| Cow position: | chr26:11875256-11874997 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 51-298 |
| Cow position: | chr26:12940359-12940620 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 235 |
| Conread position: | 51-298 |
| Cow position: | chr26:33202115-33201858 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 51-315 |
| Cow position: | chr26:28423240-28423514 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 71-290 |
| Cow position: | chr26:21637058-21636847 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 135 |
| Conread position: | 71-291 |
| Cow position: | chr26:34611200-34610981 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 72-287 |
| Cow position: | chr26:7314602-7314830 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 72-291 |
| Cow position: | chr26:10145881-10146102 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 72-313 |
| Cow position: | chr26:19636274-19636520 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 74-298 |
| Cow position: | chr26:19446116-19446350 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 74, 48 |
| Conread position: | 76-242 |
| Cow position: | chr26:33241874-33242045 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 76-290 |
| Cow position: | chr26:25526233-25526451 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 163 |
| Conread position: | 77-290 |
| Cow position: | chr26:1328871-1328661 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 85-290 |
| Cow position: | chr26:4854538-4854748 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 85-301 |
| Cow position: | chr26:19591476-19591694 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 152 |
| Conread position: | 86-308 |
| Cow position: | chr26:5666042-5666263 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 88-290 |
| Cow position: | chr26:22429835-22429640 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 127 |
| Conread position: | 97-290 |
| Cow position: | chr26:16796201-16796008 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 105, 137 |
| Conread position: | 98-271 |
| Cow position: | chr26:32670489-32670313 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 98-288 |
| Cow position: | chr26:5168404-5168595 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 47 |
| Conread position: | 100-290 |
| Cow position: | chr26:32517448-32517263 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 105-290 |
| Cow position: | chr26:33038210-33038021 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 108-300 |
| Cow position: | chr26:15132653-15132855 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 112-312 |
| Cow position: | chr26:16585455-16585655 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 115-301 |
| Cow position: | chr26:7525180-7524989 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 116-290 |
| Cow position: | chr26:13863010-13862834 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 79 |
| Conread position: | 117-284 |
| Cow position: | chr26:6487766-6487593 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 118-290 |
| Cow position: | chr26:10700876-10700699 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 120-313 |
| Cow position: | chr26:21319977-21320172 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 183 |
| Conread position: | 145-269 |
| Cow position: | chr26:10502786-10502913 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 145-289 |
| Cow position: | chr26:29897244-29897387 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 125 |
| Conread position: | 145-290 |
| Cow position: | chr26:13705720-13705564 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 145-290 |
| Cow position: | chr26:34560114-34559967 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 152-298 |
| Cow position: | chr26:12891907-12891759 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 153-290 |
| Cow position: | chr26:26407725-26407586 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 153-290 |
| Cow position: | chr26:31888797-31888934 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 158-290 |
| Cow position: | chr26:13022532-13022667 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 165-285 |
| Cow position: | chr26:13800587-13800709 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.