Cow genome map


           Conread name:
           Ss1.1-Pig1-74N02.5
        

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 122
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 47
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 290
               

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               1-300
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               1-308
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 150
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 194
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               92, 41
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               4-230
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               47, 267
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               4-313
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               5-301
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               8-235
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               61, 42
               

               Conread position:
               8-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               8-313
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               44, 220
               

               Conread position:
               11-231
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               11-234
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               11-290
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               11-290
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               11-306
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               12-300
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               13-290
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 185
               

               Conread position:
               15-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               15-312
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               16-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               25-306
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               27-313
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               33-291
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               36-287
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               50-315
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               51-298
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 235
               

               Conread position:
               51-298
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               51-315
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 88
               

               Conread position:
               71-290
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 135
               

               Conread position:
               71-291
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               72-287
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               72-291
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               72-313
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               74-298
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               76-242
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               76-290
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 163
               

               Conread position:
               77-290
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               85-290
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               85-301
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 152
               

               Conread position:
               86-308
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 133
               

               Conread position:
               88-290
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 127
               

               Conread position:
               97-290
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               105, 137
               

               Conread position:
               98-271
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               98-288
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               100-290
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               105-290
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               108-300
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               112-312
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               115-301
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               116-290
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 79
               

               Conread position:
               117-284
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               118-290
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               120-313
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               16, 183
               

               Conread position:
               145-269
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               145-289
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 125
               

               Conread position:
               145-290
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               145-290
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               152-298
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               153-290
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               153-290
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 81
               

               Conread position:
               158-290
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               165-285
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.