Cow genome map
| Conread name: | Ss1.1-Pig1-74N02.5 |
| Conread position: | 1-166 |
| Cow position: | chr28:4587989-4588163 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-205 |
| Cow position: | chr28:18591163-18591375 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 1-211 |
| Cow position: | chr28:6971454-6971237 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 1-221 |
| Cow position: | chr28:2872807-2873041 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 1-230 |
| Cow position: | chr28:11752251-11752009 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-230 |
| Cow position: | chr28:28163976-28164217 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 1-235 |
| Cow position: | chr28:2132033-2131787 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 1-249 |
| Cow position: | chr28:25596520-25596775 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 1-271 |
| Cow position: | chr28:22345909-22346199 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-285 |
| Cow position: | chr28:16346637-16346350 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 1-287 |
| Cow position: | chr28:11079196-11079490 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 1-287 |
| Cow position: | chr28:11829048-11828769 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 148, 45 |
| Conread position: | 1-287 |
| Cow position: | chr28:22813155-22813438 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 36, 213 |
| Conread position: | 1-287 |
| Cow position: | chr28:30937773-30937493 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 1-290 |
| Cow position: | chr28:4158848-4159157 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 1-290 |
| Cow position: | chr28:4834952-4834650 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 1-290 |
| Cow position: | chr28:4884373-4884060 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-290 |
| Cow position: | chr28:5204082-5204378 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 51, 230 |
| Conread position: | 1-290 |
| Cow position: | chr28:5437198-5436893 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 181 |
| Conread position: | 1-290 |
| Cow position: | chr28:5577415-5577725 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 1-290 |
| Cow position: | chr28:8140372-8140677 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 284 |
| Conread position: | 1-290 |
| Cow position: | chr28:8787429-8787732 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 1-290 |
| Cow position: | chr28:13474190-13474492 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-290 |
| Cow position: | chr28:16370186-16369896 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 1-290 |
| Cow position: | chr28:16919270-16918981 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 1-290 |
| Cow position: | chr28:19564338-19564042 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 1-290 |
| Cow position: | chr28:22371787-22371482 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 1-291 |
| Cow position: | chr28:13290242-13289963 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 122 |
| Conread position: | 1-291 |
| Cow position: | chr28:21844849-21845145 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 1-294 |
| Cow position: | chr28:34133752-34134053 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 1-295 |
| Cow position: | chr28:3914601-3914903 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 51, 233 |
| Conread position: | 1-298 |
| Cow position: | chr28:12951319-12951617 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 1-298 |
| Cow position: | chr28:20124673-20124982 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 250 |
| Conread position: | 1-298 |
| Cow position: | chr28:30327201-30326900 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 213 |
| Conread position: | 1-300 |
| Cow position: | chr28:11866775-11866465 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 1-300 |
| Cow position: | chr28:14997954-14998267 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 215 |
| Conread position: | 1-304 |
| Cow position: | chr28:27218214-27218533 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 1-309 |
| Cow position: | chr28:5684600-5684917 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 1-310 |
| Cow position: | chr28:3011383-3011053 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 1-310 |
| Cow position: | chr28:9285484-9285163 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 1-313 |
| Cow position: | chr28:9636563-9636244 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 1-313 |
| Cow position: | chr28:11426652-11426332 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 51, 218 |
| Conread position: | 1-313 |
| Cow position: | chr28:29989223-29988892 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-314 |
| Cow position: | chr28:4016428-4016743 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 4-285 |
| Cow position: | chr28:20409285-20409579 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 161 |
| Conread position: | 4-290 |
| Cow position: | chr28:25056863-25057149 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 4-291 |
| Cow position: | chr28:4282596-4282295 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 4-294 |
| Cow position: | chr28:22332428-22332727 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 5-215 |
| Cow position: | chr28:16246169-16245950 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 5-287 |
| Cow position: | chr28:11527365-11527069 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 246 |
| Conread position: | 5-290 |
| Cow position: | chr28:4070863-4071151 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 181 |
| Conread position: | 5-290 |
| Cow position: | chr28:7268042-7267756 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 38 |
| Conread position: | 5-290 |
| Cow position: | chr28:9740360-9740651 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 8-284 |
| Cow position: | chr28:31841438-31841160 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 8-285 |
| Cow position: | chr28:12430504-12430795 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 201 |
| Conread position: | 8-290 |
| Cow position: | chr28:8347628-8347927 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 8-290 |
| Cow position: | chr28:11422919-11422626 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 44, 275 |
| Conread position: | 8-290 |
| Cow position: | chr28:25128780-25129077 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-304 |
| Cow position: | chr28:4090151-4089852 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 8-313 |
| Cow position: | chr28:21868352-21868674 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 8-313 |
| Cow position: | chr28:33884305-33884618 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 11-283 |
| Cow position: | chr28:11884620-11884345 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 216 |
| Conread position: | 11-287 |
| Cow position: | chr28:4643864-4643580 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 11-290 |
| Cow position: | chr28:30746828-30746545 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 216 |
| Conread position: | 11-297 |
| Cow position: | chr28:2960932-2960631 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 11-297 |
| Cow position: | chr28:23410425-23410134 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 212 |
| Conread position: | 11-298 |
| Cow position: | chr28:16204429-16204129 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 11-309 |
| Cow position: | chr28:11346584-11346277 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 11-310 |
| Cow position: | chr28:3746105-3746410 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 11-310 |
| Cow position: | chr28:29416813-29416512 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 11-311 |
| Cow position: | chr28:3024012-3023701 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 11-313 |
| Cow position: | chr28:26982837-26982520 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 13-248 |
| Cow position: | chr28:10172512-10172268 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 164 |
| Conread position: | 13-290 |
| Cow position: | chr28:22500591-22500313 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 15-231 |
| Cow position: | chr28:25249257-25249487 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 16-299 |
| Cow position: | chr28:1099755-1099474 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 201 |
| Conread position: | 22-313 |
| Cow position: | chr28:3492874-3492568 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 225 |
| Conread position: | 24-281 |
| Cow position: | chr28:3740793-3741053 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 25-291 |
| Cow position: | chr28:7350571-7350844 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 27, 253 |
| Conread position: | 29-290 |
| Cow position: | chr28:4181921-4182194 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 229 |
| Conread position: | 30-230 |
| Cow position: | chr28:12070154-12070363 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 30-270 |
| Cow position: | chr28:4809706-4809948 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 35-298 |
| Cow position: | chr28:7009049-7008780 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 51-283 |
| Cow position: | chr28:32358062-32358290 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 51-284 |
| Cow position: | chr28:7132133-7131904 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 51-290 |
| Cow position: | chr28:3411049-3410796 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 198 |
| Conread position: | 51-290 |
| Cow position: | chr28:4013029-4013276 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 51-290 |
| Cow position: | chr28:10589081-10588840 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 53-290 |
| Cow position: | chr28:4006740-4006974 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 54-291 |
| Cow position: | chr28:9684387-9684143 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 166 |
| Conread position: | 64-314 |
| Cow position: | chr28:5630058-5630317 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 116 |
| Conread position: | 70-287 |
| Cow position: | chr28:19216787-19217002 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 152 |
| Conread position: | 72-289 |
| Cow position: | chr28:3445512-3445288 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 72-313 |
| Cow position: | chr28:9705621-9705872 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 89 |
| Conread position: | 72-313 |
| Cow position: | chr28:10863815-10863584 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 138, 5 |
| Conread position: | 72-314 |
| Cow position: | chr28:6975210-6975448 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 73-287 |
| Cow position: | chr28:26531307-26531091 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 73-290 |
| Cow position: | chr28:4045818-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 73-312 |
| Cow position: | chr28:17949145-17948903 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 7, 162 |
| Conread position: | 74-235 |
| Cow position: | chr28:7498178-7498010 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 74-287 |
| Cow position: | chr28:12991106-12991325 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 53, 153 |
| Conread position: | 74-313 |
| Cow position: | chr28:5254845-5255086 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 76-313 |
| Cow position: | chr28:4185880-4186119 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 77-306 |
| Cow position: | chr28:11816694-11816474 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 145 |
| Conread position: | 79-268 |
| Cow position: | chr28:10775736-10775540 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 79-290 |
| Cow position: | chr28:777650-777869 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 79-313 |
| Cow position: | chr28:5139016-5138782 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 69, 114 |
| Conread position: | 79-313 |
| Cow position: | chr28:7619175-7618943 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 84-313 |
| Cow position: | chr28:29850835-29850609 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 85-287 |
| Cow position: | chr28:11016389-11016594 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 85-290 |
| Cow position: | chr28:8304228-8304435 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 42, 153 |
| Conread position: | 85-291 |
| Cow position: | chr28:24082251-24082464 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 85-291 |
| Cow position: | chr28:24966368-24966580 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 86-287 |
| Cow position: | chr28:17739807-17740015 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 86-313 |
| Cow position: | chr28:10964404-10964624 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 88-285 |
| Cow position: | chr28:16879557-16879756 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 148 |
| Conread position: | 98-290 |
| Cow position: | chr28:3143881-3143692 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 98-290 |
| Cow position: | chr28:5805665-5805855 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 150 |
| Conread position: | 98-290 |
| Cow position: | chr28:8396329-8396518 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 138 |
| Conread position: | 98-292 |
| Cow position: | chr28:4364828-4364630 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 48, 178 |
| Conread position: | 99-296 |
| Cow position: | chr28:2279594-2279403 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 100-312 |
| Cow position: | chr28:30902122-30902334 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 108-290 |
| Cow position: | chr28:4876447-4876631 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 109-301 |
| Cow position: | chr28:9109221-9109415 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 110-287 |
| Cow position: | chr28:3758998-3759187 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 111-310 |
| Cow position: | chr28:10890728-10890529 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 112-313 |
| Cow position: | chr28:8936164-8936365 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 20 |
| Conread position: | 114-287 |
| Cow position: | chr28:7557724-7557540 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 114-287 |
| Cow position: | chr28:16362524-16362351 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 114-313 |
| Cow position: | chr28:19994936-19994731 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 193 |
| Conread position: | 118-289 |
| Cow position: | chr28:13269745-13269910 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 119-290 |
| Cow position: | chr28:8681411-8681244 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 120-286 |
| Cow position: | chr28:2777546-2777719 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 124-314 |
| Cow position: | chr28:26868128-26867937 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 128-313 |
| Cow position: | chr28:4866543-4866361 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 164, 16 |
| Conread position: | 131-286 |
| Cow position: | chr28:5711982-5711822 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 134-313 |
| Cow position: | chr28:16857073-16856891 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 173 |
| Conread position: | 136-313 |
| Cow position: | chr28:3257025-3257208 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 144-290 |
| Cow position: | chr28:6301125-6301277 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 145-287 |
| Cow position: | chr28:8516138-8516000 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 145-290 |
| Cow position: | chr28:3678407-3678552 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-290 |
| Cow position: | chr28:24996568-24996425 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 145-290 |
| Cow position: | chr28:26574455-26574593 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 145-300 |
| Cow position: | chr28:26960864-26960710 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 145-314 |
| Cow position: | chr28:10762939-10763105 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 148-298 |
| Cow position: | chr28:27787614-27787765 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 150-313 |
| Cow position: | chr28:24238427-24238265 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 142, 67 |
| Conread position: | 153-290 |
| Cow position: | chr28:9069941-9070078 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 153-298 |
| Cow position: | chr28:4588371-4588515 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 153-304 |
| Cow position: | chr28:2737465-2737320 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 158-289 |
| Cow position: | chr28:4100701-4100572 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 159-274 |
| Cow position: | chr28:8383920-8384031 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 159-290 |
| Cow position: | chr28:7750957-7750828 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 170-314 |
| Cow position: | chr28:7808709-7808847 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.