Cow genome map
| Conread name: | Ss1.1-Pig1-74N02.5 |
| Conread position: | 1-202 |
| Cow position: | chr29:43009199-43008989 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 104 |
| Conread position: | 1-215 |
| Cow position: | chr29:29176732-29176509 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 1-219 |
| Cow position: | chr29:26615839-26615605 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-223 |
| Cow position: | chr29:32211173-32210953 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 1-230 |
| Cow position: | chr29:10156422-10156181 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 1-235 |
| Cow position: | chr29:23243997-23243748 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 110 |
| Conread position: | 1-236 |
| Cow position: | chr29:4002779-4003023 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 1-247 |
| Cow position: | chr29:1556815-1557073 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 1-270 |
| Cow position: | chr29:45005742-45005458 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 72, 49 |
| Conread position: | 1-284 |
| Cow position: | chr29:34359097-34358797 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 1-287 |
| Cow position: | chr29:4520218-4520516 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-287 |
| Cow position: | chr29:22613309-22613605 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 202 |
| Conread position: | 1-287 |
| Cow position: | chr29:36530750-36531050 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-290 |
| Cow position: | chr29:19762159-19762450 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 1-290 |
| Cow position: | chr29:28197122-28196833 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 1-290 |
| Cow position: | chr29:31594247-31593970 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 75 |
| Conread position: | 1-290 |
| Cow position: | chr29:34773851-34773562 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 50, 221 |
| Conread position: | 1-290 |
| Cow position: | chr29:40117451-40117752 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 40, 182 |
| Conread position: | 1-290 |
| Cow position: | chr29:40763795-40763509 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 1-291 |
| Cow position: | chr29:732501-732798 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 1-298 |
| Cow position: | chr29:25737535-25737224 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 284 |
| Conread position: | 1-298 |
| Cow position: | chr29:31674513-31674826 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-304 |
| Cow position: | chr29:42364131-42363818 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-313 |
| Cow position: | chr29:10838833-10839148 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 1-313 |
| Cow position: | chr29:17109851-17110164 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 1-313 |
| Cow position: | chr29:22162370-22162055 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 51, 80 |
| Conread position: | 1-313 |
| Cow position: | chr29:35501768-35501455 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 54, 214 |
| Conread position: | 1-314 |
| Cow position: | chr29:39111432-39111113 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 51, 185 |
| Conread position: | 4-290 |
| Cow position: | chr29:10058650-10058356 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 4-290 |
| Cow position: | chr29:12680044-12680345 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 4-290 |
| Cow position: | chr29:26275498-26275788 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 8-215 |
| Cow position: | chr29:20903395-20903182 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 8-229 |
| Cow position: | chr29:36217007-36217236 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-280 |
| Cow position: | chr29:10456669-10456403 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 8-305 |
| Cow position: | chr29:27329782-27330086 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 199 |
| Conread position: | 8-313 |
| Cow position: | chr29:5892738-5893055 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 276 |
| Conread position: | 9-310 |
| Cow position: | chr29:17297025-17297345 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 202 |
| Conread position: | 11-284 |
| Cow position: | chr29:1007709-1007999 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 11-287 |
| Cow position: | chr29:4480279-4479983 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 11-287 |
| Cow position: | chr29:29769458-29769170 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 11-297 |
| Cow position: | chr29:26017609-26017306 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 11-308 |
| Cow position: | chr29:32963449-32963728 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 11-313 |
| Cow position: | chr29:17222306-17222625 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 11-314 |
| Cow position: | chr29:31489214-31489535 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 12-290 |
| Cow position: | chr29:26778774-26779063 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 208 |
| Conread position: | 12-313 |
| Cow position: | chr29:9709589-9709902 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 301 |
| Conread position: | 15-208 |
| Cow position: | chr29:24578755-24578964 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 15-235 |
| Cow position: | chr29:8926566-8926331 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 15-290 |
| Cow position: | chr29:25092009-25092291 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 15-314 |
| Cow position: | chr29:29057080-29057393 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 20-290 |
| Cow position: | chr29:5063049-5063330 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-287 |
| Cow position: | chr29:21665994-21666270 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 27-290 |
| Cow position: | chr29:15947080-15947356 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 28-226 |
| Cow position: | chr29:742724-742531 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 28-235 |
| Cow position: | chr29:26559331-26559118 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 29-313 |
| Cow position: | chr29:31928898-31929195 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 151 |
| Conread position: | 32-287 |
| Cow position: | chr29:32894182-32894441 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 33-290 |
| Cow position: | chr29:20770258-20770531 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 230 |
| Conread position: | 51-287 |
| Cow position: | chr29:44139310-44139061 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 34, 130 |
| Conread position: | 51-290 |
| Cow position: | chr29:41112939-41112703 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 81 |
| Conread position: | 51-298 |
| Cow position: | chr29:31943800-31944061 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 252 |
| Conread position: | 51-308 |
| Cow position: | chr29:29324478-29324215 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 51-313 |
| Cow position: | chr29:22029022-22028750 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 177 |
| Conread position: | 51-313 |
| Cow position: | chr29:38980135-38979869 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 53-313 |
| Cow position: | chr29:1011636-1011385 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 165, 29 |
| Conread position: | 63-287 |
| Cow position: | chr29:4070581-4070804 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 65-291 |
| Cow position: | chr29:26540585-26540352 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 72-287 |
| Cow position: | chr29:22735144-22734922 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 214 |
| Conread position: | 72-288 |
| Cow position: | chr29:30548738-30548958 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 5 |
| Conread position: | 72-298 |
| Cow position: | chr29:29923611-29923381 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 72-305 |
| Cow position: | chr29:17154741-17154965 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 73-213 |
| Cow position: | chr29:38978494-38978636 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 103 |
| Conread position: | 73-287 |
| Cow position: | chr29:7624141-7624349 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 92 |
| Conread position: | 73-311 |
| Cow position: | chr29:36952332-36952104 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 74-285 |
| Cow position: | chr29:16011698-16011493 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 74-285 |
| Cow position: | chr29:27846428-27846666 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 76-313 |
| Cow position: | chr29:396378-396609 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 77-284 |
| Cow position: | chr29:31981798-31982003 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 77-313 |
| Cow position: | chr29:28066459-28066686 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 165, 8 |
| Conread position: | 78-287 |
| Cow position: | chr29:32197664-32197878 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 79-284 |
| Cow position: | chr29:23825242-23825031 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 79-287 |
| Cow position: | chr29:22167110-22166903 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 130 |
| Conread position: | 79-287 |
| Cow position: | chr29:39038301-39038085 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 79-289 |
| Cow position: | chr29:44991455-44991239 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 79-304 |
| Cow position: | chr29:17804502-17804731 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 79-305 |
| Cow position: | chr29:40791278-40791499 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 80-290 |
| Cow position: | chr29:9310569-9310790 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 80-293 |
| Cow position: | chr29:4423471-4423260 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 80-313 |
| Cow position: | chr29:36357098-36357341 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 81-290 |
| Cow position: | chr29:23155198-23155422 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 82-313 |
| Cow position: | chr29:19949280-19949515 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 86-284 |
| Cow position: | chr29:22723576-22723777 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 88-313 |
| Cow position: | chr29:7290753-7290977 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 182 |
| Conread position: | 96-298 |
| Cow position: | chr29:36781319-36781115 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 98-290 |
| Cow position: | chr29:29308585-29308395 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 98-313 |
| Cow position: | chr29:6686646-6686445 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 98-313 |
| Cow position: | chr29:9378624-9378846 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 100-287 |
| Cow position: | chr29:19363700-19363892 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 101-290 |
| Cow position: | chr29:22729558-22729752 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 110-313 |
| Cow position: | chr29:43088310-43088518 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 114-290 |
| Cow position: | chr29:934928-935113 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 114-290 |
| Cow position: | chr29:1325446-1325633 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 114-297 |
| Cow position: | chr29:15796489-15796678 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 165 |
| Conread position: | 114-304 |
| Cow position: | chr29:12890688-12890878 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 114-304 |
| Cow position: | chr29:15797955-15798155 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 166 |
| Conread position: | 117-298 |
| Cow position: | chr29:32215713-32215899 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 137 |
| Conread position: | 118-290 |
| Cow position: | chr29:7444054-7443880 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 121-314 |
| Cow position: | chr29:40351065-40350872 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 136-301 |
| Cow position: | chr29:33143325-33143158 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 144-272 |
| Cow position: | chr29:34688870-34688741 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 144-287 |
| Cow position: | chr29:24660722-24660861 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 145-290 |
| Cow position: | chr29:936245-936390 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-307 |
| Cow position: | chr29:4441166-4441001 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 146-289 |
| Cow position: | chr29:42646089-42646235 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 146-289 |
| Cow position: | chr29:42797995-42798141 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 147-290 |
| Cow position: | chr29:17282108-17282248 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 148-290 |
| Cow position: | chr29:30206828-30206692 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 150-290 |
| Cow position: | chr29:36546739-36546595 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 150-290 |
| Cow position: | chr29:40112425-40112566 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 153-313 |
| Cow position: | chr29:22776125-22776288 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 158-287 |
| Cow position: | chr29:29296445-29296572 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 161-313 |
| Cow position: | chr29:25669148-25669293 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 162-290 |
| Cow position: | chr29:44985327-44985448 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 182-290 |
| Cow position: | chr29:570764-570657 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 182-290 |
| Cow position: | chr29:659357-659468 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.