Cow genome map


           Conread name:
           Ss1.1-Pig1-93A05.5
        

               Conread position:
               1-91
               

               Cow position:
               chr18:48145497-48145407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               83-213
               

               Cow position:
               chr18:48145116-48144986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               123
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-319
               

               Cow position:
               chr18:48144707-48144590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               379-457
               

               Cow position:
               chr18:48142370-48142292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               455-573
               

               Cow position:
               chr18:48140742-48140624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               570-707
               

               Cow position:
               chr18:48140307-48140170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               123
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               696-795
               

               Cow position:
               chr18:48138564-48138465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               794-900
               

               Cow position:
               chr18:48138276-48138170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               901-1038
               

               Cow position:
               chr18:48137729-48137592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               1040-1511
               

               Cow position:
               chr18:48137411-48136925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 219
               
Show alignments to all cow chromosomes.