Cow genome map

Conread name: Ss1.1-Pig2-104J14.5

Conread position: 1-101
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-102
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-106
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-106
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1-110
Cow position:
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-111
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-116
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 115

Conread position: 1-117
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 32

Conread position: 1-117
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 59

Conread position: 1-119
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 1-119
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-178
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 1-179
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 1-180
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 32

Conread position: 1-187
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 31

Conread position: 1-187
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 89, 200

Conread position: 1-191
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 21

Conread position: 1-200
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 1-200
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 59

Conread position: 1-201
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 116

Conread position: 1-201
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 121, 101

Conread position: 1-205
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 57

Conread position: 1-205
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 1-205
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 1-205
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 89

Conread position: 1-205
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 115

Conread position: 1-205
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 88, 67

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 108, 59

Conread position: 1-206
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 1-222
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 53

Conread position: 2-106
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 2-119
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 2-179
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 2-182
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 2-183
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 2-190
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 71

Conread position: 2-192
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 117, 28

Conread position: 2-203
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 2-204
Cow position:
Alignm length: 225
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 2-205
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 17

Conread position: 2-206
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 3-117
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 111

Conread position: 3-205
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 73

Conread position: 4-119
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 4-192
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 60

Conread position: 7-221
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 221

Conread position: 11-119
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 103

Conread position: 11-205
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 15-205
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 105

Conread position: 23-201
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 27

Conread position: 29-199
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 33-228
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 54

Conread position: 42-211
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 24

Conread position: 198-504
Cow position:
Alignm length: 316
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 36

Conread position: 211-504
Cow position:
Alignm length: 299
Alignm identity: 192
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 19

Conread position: 216-504
Cow position:
Alignm length: 297
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 73

Conread position: 218-498
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 6

Conread position: 234-504
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 27

Conread position: 250-504
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 25

Conread position: 250-504
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 37

Conread position: 251-504
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 108

Conread position: 267-467
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 90

Conread position: 267-501
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 80

Conread position: 267-504
Cow position:
Alignm length: 238
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 269-486
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 5

Conread position: 269-492
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 87

Conread position: 270-501
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 28

Conread position: 270-504
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 271-500
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 12

Conread position: 272-493
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 92, 41

Conread position: 273-504
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 81

Conread position: 274-501
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 274-504
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 131

Conread position: 275-498
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 79

Conread position: 275-498
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 82

Conread position: 275-504
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 36

Conread position: 276-501
Cow position:
Alignm length: 229
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 16

Conread position: 276-504
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 10

Conread position: 283-501
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 13

Conread position: 283-504
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 113

Conread position: 283-504
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 69

Conread position: 283-504
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 74

Conread position: 286-501
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 189

Conread position: 289-504
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 51

Conread position: 289-504
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 115

Conread position: 293-486
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 64

Conread position: 295-489
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 114

Conread position: 298-501
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 57

Conread position: 298-501
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 65

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 56

Conread position: 298-504
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 108

Conread position: 298-504
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 72

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 74

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 33

Conread position: 298-504
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 16

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 70

Conread position: 298-504
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 299-504
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 299-504
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 26

Conread position: 299-504
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 58

Conread position: 299-504
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 58

Conread position: 300-504
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 102

Conread position: 301-501
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 104

Conread position: 303-498
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 11

Conread position: 303-504
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 52

Conread position: 306-501
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 90

Conread position: 307-466
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 60

Conread position: 307-501
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 307-501
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 99

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 177, 93

Conread position: 307-504
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 43

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 45

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 47

Conread position: 307-504
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 115

Conread position: 307-504
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 44

Conread position: 307-504
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 179

Conread position: 307-504
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 47

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 45

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 88

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 20

Conread position: 307-504
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 97

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 60

Conread position: 308-500
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 309-504
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 313-504
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 54

Conread position: 313-504
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 90

Conread position: 315-504
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 39

Conread position: 315-504
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 39

Conread position: 316-504
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 51

Conread position: 317-504
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 34

Conread position: 317-504
Cow position:
Alignm length: 189
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 50

Conread position: 330-499
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 22

Conread position: 330-501
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 119

Conread position: 330-504
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 68

Conread position: 330-504
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 24

Conread position: 335-503
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 50

Conread position: 356-504
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.