Cow genome map

Conread name: Ss1.1-Pig2-104J14.5

Conread position: 1-106
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-106
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 1-106
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 1-116
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 59

Conread position: 1-116
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 87, 59

Conread position: 1-117
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 58

Conread position: 1-119
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1-119
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-133
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 1-143
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 110

Conread position: 1-166
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-189
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 59

Conread position: 1-190
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 107, 84

Conread position: 1-200
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 65

Conread position: 1-201
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 32

Conread position: 1-203
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 12

Conread position: 1-203
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 1-203
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 123

Conread position: 1-203
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 82, 139

Conread position: 1-205
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 1-205
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 1-205
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 102, 185

Conread position: 1-205
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 123, 57

Conread position: 1-210
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 104, 67

Conread position: 2-94
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 2-110
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 2-123
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 2-182
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 2-185
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 91

Conread position: 2-188
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 2-190
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 18

Conread position: 2-191
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 2-196
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 14

Conread position: 2-196
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 11

Conread position: 2-205
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 2-206
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 103

Conread position: 2-223
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 20

Conread position: 2-252
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 118

Conread position: 3-100
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 3-116
Cow position:
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 113

Conread position: 3-190
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 3-192
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 3-205
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 184

Conread position: 4-116
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 56

Conread position: 4-190
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 5-206
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 6-119
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 107

Conread position: 6-188
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 54

Conread position: 6-192
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 174

Conread position: 6-206
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 57, 21

Conread position: 8-203
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 8-205
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 52

Conread position: 11-168
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 22

Conread position: 11-205
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 55

Conread position: 22-204
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 43

Conread position: 22-205
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 45

Conread position: 23-201
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 151-467
Cow position:
Alignm length: 328
Alignm identity: 211
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 8, 29

Conread position: 165-504
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 14

Conread position: 199-504
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 24

Conread position: 216-449
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 24

Conread position: 216-500
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 24

Conread position: 217-504
Cow position:
Alignm length: 298
Alignm identity: 197
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 7

Conread position: 217-504
Cow position:
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 7

Conread position: 225-460
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 85, 15

Conread position: 225-501
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 15

Conread position: 235-504
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 40

Conread position: 245-504
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 42

Conread position: 254-504
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 32

Conread position: 267-490
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 101

Conread position: 267-497
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 19

Conread position: 270-486
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 85

Conread position: 270-504
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 16

Conread position: 271-501
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 132

Conread position: 271-504
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 15

Conread position: 272-504
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 40

Conread position: 274-504
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 12

Conread position: 275-497
Cow position:
Alignm length: 229
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 213

Conread position: 275-504
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 132

Conread position: 275-504
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 11

Conread position: 277-499
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 33, 9

Conread position: 277-504
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 10

Conread position: 283-501
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 123

Conread position: 283-504
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 29, 109

Conread position: 286-463
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 286-501
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 71

Conread position: 286-503
Cow position:
Alignm length: 220
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 99

Conread position: 286-504
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 12

Conread position: 288-501
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 69

Conread position: 288-504
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 119

Conread position: 289-467
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 289-501
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 100

Conread position: 289-504
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 66

Conread position: 289-504
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 104

Conread position: 289-504
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 65

Conread position: 289-504
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 57

Conread position: 298-500
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 72

Conread position: 298-501
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 57

Conread position: 298-501
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 180

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 59

Conread position: 298-504
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 72

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 59

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 58

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 56

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 106

Conread position: 298-504
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 14

Conread position: 298-504
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 70

Conread position: 298-504
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 70

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 298-504
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 14

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 306-498
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 307-493
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 45

Conread position: 307-495
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 98

Conread position: 307-498
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 39

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 133

Conread position: 307-504
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 162

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 94

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 45

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 94

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 106

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 60

Conread position: 307-504
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 82

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 95

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 60

Conread position: 308-496
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 59

Conread position: 309-501
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 43

Conread position: 309-504
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 7

Conread position: 310-504
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 22

Conread position: 312-501
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 40

Conread position: 313-501
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 39

Conread position: 314-504
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 38

Conread position: 314-504
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 53

Conread position: 315-504
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 329-504
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 25

Conread position: 344-501
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 29

Conread position: 344-504
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 23

Conread position: 356-504
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 362-504
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 368-504
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 0

Show alignments to all cow chromosomes.