Cow genome map
| Conread name: | Ss1.1-Pig2-104J14.5 |
| Conread position: | 1-106 |
| Cow position: | chr15:5571495-5571387 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-106 |
| Cow position: | chr15:11995883-11995775 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-106 |
| Cow position: | chr15:21522930-21523038 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-116 |
| Cow position: | chr15:11646344-11646228 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 1-116 |
| Cow position: | chr15:50322739-50322855 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 1-117 |
| Cow position: | chr15:26919132-26919017 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 1-119 |
| Cow position: | chr15:22095266-22095389 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-119 |
| Cow position: | chr15:47821953-47822069 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-133 |
| Cow position: | chr15:10608162-10608032 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-143 |
| Cow position: | chr15:11559212-11559071 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 1-166 |
| Cow position: | chr15:35112738-35112560 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-189 |
| Cow position: | chr15:39599585-39599795 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 1-190 |
| Cow position: | chr15:4535054-4535263 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 107, 84 |
| Conread position: | 1-200 |
| Cow position: | chr15:20370313-20370101 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 1-201 |
| Cow position: | chr15:43626611-43626828 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 1-203 |
| Cow position: | chr15:10737603-10737408 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 1-203 |
| Cow position: | chr15:24941233-24941016 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-203 |
| Cow position: | chr15:30985644-30985428 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 1-203 |
| Cow position: | chr15:47279997-47279789 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 139 |
| Conread position: | 1-205 |
| Cow position: | chr15:4485284-4485516 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-205 |
| Cow position: | chr15:4676865-4676634 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-205 |
| Cow position: | chr15:13554497-13554712 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 102, 185 |
| Conread position: | 1-205 |
| Cow position: | chr15:22939181-22938964 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 1-210 |
| Cow position: | chr15:13684123-13683907 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 104, 67 |
| Conread position: | 2-94 |
| Cow position: | chr15:4418258-4418165 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-110 |
| Cow position: | chr15:38883296-38883407 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2-123 |
| Cow position: | chr15:49738901-49738779 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-182 |
| Cow position: | chr15:35642163-35642368 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 2-185 |
| Cow position: | chr15:9648563-9648377 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 91 |
| Conread position: | 2-188 |
| Cow position: | chr15:19403125-19403331 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-190 |
| Cow position: | chr15:286626-286814 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 2-191 |
| Cow position: | chr15:18206368-18206154 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-196 |
| Cow position: | chr15:23927326-23927135 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 2-196 |
| Cow position: | chr15:38846248-38846459 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 2-205 |
| Cow position: | chr15:46611071-46611290 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 2-206 |
| Cow position: | chr15:19119460-19119244 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 103 |
| Conread position: | 2-223 |
| Cow position: | chr15:16616346-16616579 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 2-252 |
| Cow position: | chr15:8428158-8428423 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 3-100 |
| Cow position: | chr15:5726469-5726569 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 3-116 |
| Cow position: | chr15:34145010-34144895 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 113 |
| Conread position: | 3-190 |
| Cow position: | chr15:23768119-23767909 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-192 |
| Cow position: | chr15:21366052-21365842 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-205 |
| Cow position: | chr15:27281013-27281234 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 184 |
| Conread position: | 4-116 |
| Cow position: | chr15:41583057-41583170 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 56 |
| Conread position: | 4-190 |
| Cow position: | chr15:17100564-17100360 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 5-206 |
| Cow position: | chr15:51822289-51822515 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 6-119 |
| Cow position: | chr15:19771280-19771394 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 107 |
| Conread position: | 6-188 |
| Cow position: | chr15:36782179-36781982 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 6-192 |
| Cow position: | chr15:14856322-14856126 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 174 |
| Conread position: | 6-206 |
| Cow position: | chr15:5984444-5984235 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 8-203 |
| Cow position: | chr15:23180585-23180791 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 8-205 |
| Cow position: | chr15:33976538-33976321 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 11-168 |
| Cow position: | chr15:16936690-16936524 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 11-205 |
| Cow position: | chr15:14505579-14505799 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 22-204 |
| Cow position: | chr15:23775786-23775591 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 22-205 |
| Cow position: | chr15:7749972-7749775 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 23-201 |
| Cow position: | chr15:18605555-18605751 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 151-467 |
| Cow position: | chr15:11996041-11995720 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 165-504 |
| Cow position: | chr15:33976679-33976351 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 199-504 |
| Cow position: | chr15:8579088-8578774 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 216-449 |
| Cow position: | chr15:36773640-36773407 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 216-500 |
| Cow position: | chr15:42142917-42143190 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 217-504 |
| Cow position: | chr15:13515421-13515711 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 217-504 |
| Cow position: | chr15:33306165-33306449 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 225-460 |
| Cow position: | chr15:26919208-26918975 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 85, 15 |
| Conread position: | 225-501 |
| Cow position: | chr15:39621405-39621677 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 235-504 |
| Cow position: | chr15:22751526-22751793 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 245-504 |
| Cow position: | chr15:43827688-43827430 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 254-504 |
| Cow position: | chr15:39880-40126 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 267-490 |
| Cow position: | chr15:36782220-36782004 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 101 |
| Conread position: | 267-497 |
| Cow position: | chr15:39599548-39599775 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 270-486 |
| Cow position: | chr15:50322704-50322919 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 270-504 |
| Cow position: | chr15:4138242-4138478 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 271-501 |
| Cow position: | chr15:36621521-36621757 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 132 |
| Conread position: | 271-504 |
| Cow position: | chr15:144125-143889 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 272-504 |
| Cow position: | chr15:20487095-20486875 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 274-504 |
| Cow position: | chr15:20472432-20472204 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 275-497 |
| Cow position: | chr15:15881042-15881268 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 213 |
| Conread position: | 275-504 |
| Cow position: | chr15:41620077-41619844 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 132 |
| Conread position: | 275-504 |
| Cow position: | chr15:51427709-51427481 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 277-499 |
| Cow position: | chr15:21522903-21523127 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 277-504 |
| Cow position: | chr15:9062479-9062252 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 283-501 |
| Cow position: | chr15:27973096-27972876 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 123 |
| Conread position: | 283-504 |
| Cow position: | chr15:4535032-4535249 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 286-463 |
| Cow position: | chr15:1804211-1804027 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 286-501 |
| Cow position: | chr15:5571514-5571297 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 286-503 |
| Cow position: | chr15:44256602-44256818 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 286-504 |
| Cow position: | chr15:16583572-16583370 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 288-501 |
| Cow position: | chr15:10245878-10245670 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 288-504 |
| Cow position: | chr15:4676882-4676664 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 119 |
| Conread position: | 289-467 |
| Cow position: | chr15:6168393-6168210 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 289-501 |
| Cow position: | chr15:33285006-33285221 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 289-504 |
| Cow position: | chr15:14020600-14020813 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 289-504 |
| Cow position: | chr15:21832300-21832082 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 289-504 |
| Cow position: | chr15:24128778-24128991 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 289-504 |
| Cow position: | chr15:25584961-25584747 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 298-500 |
| Cow position: | chr15:31857725-31857930 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 298-501 |
| Cow position: | chr15:29340202-29340401 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 298-501 |
| Cow position: | chr15:40798292-40798087 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 180 |
| Conread position: | 298-504 |
| Cow position: | chr15:1329966-1329759 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 298-504 |
| Cow position: | chr15:5234865-5234663 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 298-504 |
| Cow position: | chr15:12316063-12316266 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 298-504 |
| Cow position: | chr15:16307550-16307758 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 298-504 |
| Cow position: | chr15:19186484-19186273 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 298-504 |
| Cow position: | chr15:21893918-21894124 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 298-504 |
| Cow position: | chr15:22168194-22168400 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 298-504 |
| Cow position: | chr15:23798388-23798177 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 298-504 |
| Cow position: | chr15:24044960-24044756 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 298-504 |
| Cow position: | chr15:29792773-29792570 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 298-504 |
| Cow position: | chr15:32979903-32979692 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 298-504 |
| Cow position: | chr15:39405874-39406076 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 298-504 |
| Cow position: | chr15:51831461-51831250 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 306-498 |
| Cow position: | chr15:37381769-37381967 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 307-493 |
| Cow position: | chr15:13387228-13387414 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 307-495 |
| Cow position: | chr15:21421087-21421274 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 307-498 |
| Cow position: | chr15:47821958-47822135 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 307-501 |
| Cow position: | chr15:11658420-11658226 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 307-504 |
| Cow position: | chr15:794866-794671 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 307-504 |
| Cow position: | chr15:4485289-4485486 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 133 |
| Conread position: | 307-504 |
| Cow position: | chr15:6657245-6657447 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 162 |
| Conread position: | 307-504 |
| Cow position: | chr15:7430125-7430323 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 307-504 |
| Cow position: | chr15:17100562-17100374 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 307-504 |
| Cow position: | chr15:18720458-18720656 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 45 |
| Conread position: | 307-504 |
| Cow position: | chr15:19403129-19403319 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 307-504 |
| Cow position: | chr15:21389020-21388825 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 106 |
| Conread position: | 307-504 |
| Cow position: | chr15:22532386-22532583 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 60 |
| Conread position: | 307-504 |
| Cow position: | chr15:30047394-30047194 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 307-504 |
| Cow position: | chr15:34104419-34104608 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 307-504 |
| Cow position: | chr15:35642167-35642362 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 307-504 |
| Cow position: | chr15:38883300-38883498 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 307-504 |
| Cow position: | chr15:40009502-40009308 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 307-504 |
| Cow position: | chr15:52611458-52611655 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 308-496 |
| Cow position: | chr15:26158467-26158284 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 309-501 |
| Cow position: | chr15:41583061-41583249 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 309-504 |
| Cow position: | chr15:52454594-52454787 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 310-504 |
| Cow position: | chr15:14870895-14871089 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 312-501 |
| Cow position: | chr15:31202153-31202345 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 313-501 |
| Cow position: | chr15:14505580-14505766 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 314-504 |
| Cow position: | chr15:16639936-16640125 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 314-504 |
| Cow position: | chr15:23702930-23703115 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 315-504 |
| Cow position: | chr15:240998-241190 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 329-504 |
| Cow position: | chr15:26896544-26896370 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 344-501 |
| Cow position: | chr15:10283876-10284033 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 344-504 |
| Cow position: | chr15:25208583-25208422 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 356-504 |
| Cow position: | chr15:47042444-47042295 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 362-504 |
| Cow position: | chr15:36422857-36422997 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 368-504 |
| Cow position: | chr15:37716715-37716581 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
Show alignments to all cow chromosomes.