Cow genome map

Conread name: Ss1.1-Pig2-104J14.5

Conread position: 1-101
Cow position:
Alignm length: 104
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 41

Conread position: 1-116
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 86, 115

Conread position: 1-117
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 113

Conread position: 1-119
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1-172
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 58

Conread position: 1-182
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 147

Conread position: 1-183
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 156

Conread position: 1-186
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 116

Conread position: 1-188
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 59

Conread position: 1-188
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 1-188
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 50

Conread position: 1-188
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 29

Conread position: 1-188
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 1-190
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 121

Conread position: 1-190
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 1-201
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 139

Conread position: 1-201
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 88, 58

Conread position: 1-202
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 1-205
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 14

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 59

Conread position: 1-206
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 66

Conread position: 1-206
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 1-211
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 32

Conread position: 2-87
Cow position:
Alignm length: 86
Alignm identity: 77
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-116
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 100

Conread position: 2-119
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 2-184
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 101

Conread position: 2-190
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 12

Conread position: 2-197
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 85, 152

Conread position: 2-200
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 137

Conread position: 2-205
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 86

Conread position: 2-205
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 2-221
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 3-111
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 75

Conread position: 3-200
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 19

Conread position: 5-205
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 6-205
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 52

Conread position: 6-205
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 53

Conread position: 7-195
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 26

Conread position: 22-205
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 97

Conread position: 35-213
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 36-200
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 70

Conread position: 164-504
Cow position:
Alignm length: 347
Alignm identity: 225
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 15

Conread position: 171-504
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 8

Conread position: 216-501
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 24

Conread position: 240-498
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 15, 6

Conread position: 260-504
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 81

Conread position: 264-504
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 120

Conread position: 266-504
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 267-504
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 90

Conread position: 267-504
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 138

Conread position: 268-504
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 18

Conread position: 269-488
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 269-501
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 41, 84

Conread position: 269-504
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 5

Conread position: 270-500
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 13

Conread position: 270-504
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 84

Conread position: 271-495
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 271-498
Cow position:
Alignm length: 228
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 212, 0

Conread position: 272-504
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 80

Conread position: 275-501
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 20

Conread position: 276-504
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 96

Conread position: 276-504
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 55

Conread position: 281-504
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 283-482
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 87

Conread position: 283-493
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 123

Conread position: 283-501
Cow position:
Alignm length: 222
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 71

Conread position: 283-504
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 119

Conread position: 283-504
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 175

Conread position: 286-504
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 287-504
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 27

Conread position: 288-504
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 119

Conread position: 288-504
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 71

Conread position: 293-504
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 77

Conread position: 293-504
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 38

Conread position: 293-504
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 298-490
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 85

Conread position: 298-490
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 14

Conread position: 298-498
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 72

Conread position: 298-498
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 14

Conread position: 298-501
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 91

Conread position: 298-501
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 55

Conread position: 298-501
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 44

Conread position: 298-504
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 16

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 135

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 28

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 59

Conread position: 298-504
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 13

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 72

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 59

Conread position: 300-501
Cow position:
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 68

Conread position: 306-501
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 49

Conread position: 306-504
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 95

Conread position: 307-490
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 82

Conread position: 307-500
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 62

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 19

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 45

Conread position: 307-501
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 23

Conread position: 307-501
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 133, 93

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 307-501
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 95

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 43

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 94

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 176, 47

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 87

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 60

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 47

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 87

Conread position: 307-504
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 47

Conread position: 307-504
Cow position:
Alignm length: 198
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 30

Conread position: 307-504
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 60

Conread position: 308-498
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 308-504
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 309-504
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 59

Conread position: 310-504
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 57

Conread position: 313-504
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 54

Conread position: 314-504
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 40

Conread position: 314-504
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 316-496
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 51

Conread position: 316-501
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 13

Conread position: 320-504
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 33

Conread position: 330-504
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 62

Conread position: 330-504
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 351-500
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 354-504
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.