Cow genome map

Conread name: Ss1.1-Pig2-104J14.5

Conread position: 1-102
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1-106
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 59

Conread position: 1-110
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-111
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 1-116
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 106

Conread position: 1-116
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 116

Conread position: 1-116
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 116

Conread position: 1-119
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-119
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-119
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-132
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 57

Conread position: 1-188
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 1-190
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 1-190
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 32

Conread position: 1-192
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 1-200
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 57

Conread position: 1-203
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-204
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 51

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 88

Conread position: 1-205
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 41

Conread position: 1-205
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 196

Conread position: 1-205
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 60

Conread position: 1-205
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 65

Conread position: 1-206
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 142

Conread position: 1-210
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 65, 223

Conread position: 1-211
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 200

Conread position: 1-217
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 88, 58

Conread position: 2-116
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 117

Conread position: 2-175
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 72

Conread position: 2-200
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 2-201
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 80, 56

Conread position: 2-203
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 189

Conread position: 2-203
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 81

Conread position: 2-203
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 118

Conread position: 2-205
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 11

Conread position: 2-205
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 87, 0

Conread position: 2-205
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 3-182
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 55

Conread position: 4-119
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-196
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 56

Conread position: 5-201
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 102

Conread position: 11-205
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 32-190
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 86

Conread position: 149-493
Cow position:
Alignm length: 350
Alignm identity: 223
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 31

Conread position: 218-476
Cow position:
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 22

Conread position: 228-504
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 32, 12

Conread position: 237-501
Cow position:
Alignm length: 269
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 79

Conread position: 240-504
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 54

Conread position: 240-504
Cow position:
Alignm length: 272
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 254-500
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 60

Conread position: 267-504
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 54

Conread position: 268-501
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 100

Conread position: 269-504
Cow position:
Alignm length: 240
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 101

Conread position: 270-498
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 151

Conread position: 270-504
Cow position:
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 19

Conread position: 271-489
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 41

Conread position: 271-504
Cow position:
Alignm length: 239
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 15

Conread position: 271-504
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 196, 34

Conread position: 271-504
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 101

Conread position: 271-504
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 13

Conread position: 272-501
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 111

Conread position: 273-504
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 84

Conread position: 274-490
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 81

Conread position: 274-497
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 212

Conread position: 274-501
Cow position:
Alignm length: 234
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 121

Conread position: 274-504
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 15

Conread position: 275-498
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 80

Conread position: 276-504
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 124

Conread position: 283-484
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 139

Conread position: 283-500
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 55

Conread position: 283-501
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 48

Conread position: 283-504
Cow position:
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 29

Conread position: 284-498
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 43

Conread position: 286-503
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 47

Conread position: 286-504
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 67

Conread position: 289-504
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 25

Conread position: 290-498
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 8

Conread position: 292-504
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 78

Conread position: 293-498
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 64

Conread position: 298-467
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 72

Conread position: 298-491
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 69

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 59

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 72

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 94

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 189

Conread position: 298-504
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 106

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 143

Conread position: 300-504
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 178, 14

Conread position: 305-494
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 45

Conread position: 306-499
Cow position:
Alignm length: 195
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 49, 64

Conread position: 306-501
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 306-504
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 30

Conread position: 307-493
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 12

Conread position: 307-498
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 58, 45

Conread position: 307-498
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 97

Conread position: 307-499
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 47

Conread position: 307-501
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 44

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 79

Conread position: 307-503
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 45

Conread position: 307-504
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 90

Conread position: 307-504
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 97

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 44

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 94

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 30

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 94

Conread position: 307-504
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 45

Conread position: 309-499
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 309-500
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 310-504
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 313-501
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 56

Conread position: 315-502
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 52

Conread position: 330-504
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 334-504
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 49

Conread position: 355-498
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 359-501
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 362-504
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.