Cow genome map

Conread name: Ss1.1-Pig2-104J14.5

Conread position: 1-106
Cow position: chr25:18905829-18905721 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 1-111
Cow position: chr25:6255992-6256108 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 1-111
Cow position: chr25:26654853-26654744 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 1-117
Cow position: chr25:28188003-28188119 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 111

Conread position: 1-120
Cow position: chr25:16001581-16001702 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 59

Conread position: 1-126
Cow position: chr25:36026952-36026823 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 1-190
Cow position: chr25:20008078-20007871 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 59

Conread position: 1-190
Cow position: chr25:35333102-35332902 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 88, 138

Conread position: 1-197
Cow position: chr25:36535493-36535708 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 1-201
Cow position: chr25:9634849-9634640 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 49

Conread position: 1-203
Cow position: chr25:14224860-14225077 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 29

Conread position: 1-204
Cow position: chr25:10365809-10366035 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 12

Conread position: 1-205
Cow position: chr25:3145788-3145561 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-205
Cow position: chr25:4521893-4522102 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 88, 32

Conread position: 1-205
Cow position: chr25:7470285-7470086 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 22

Conread position: 1-205
Cow position: chr25:9349337-9349542 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 30

Conread position: 1-205
Cow position: chr25:13569227-13569452 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 92

Conread position: 1-205
Cow position: chr25:18564433-18564210 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 88, 104

Conread position: 1-205
Cow position: chr25:31732790-31733021 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 57

Conread position: 1-223
Cow position: chr25:9957096-9957333 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 121, 93

Conread position: 1-239
Cow position: chr25:12824076-12824335 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 211

Conread position: 2-126
Cow position: chr25:12755548-12755675 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 113

Conread position: 2-152
Cow position: chr25:12081378-12081534 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 84

Conread position: 2-190
Cow position: chr25:33978273-33978470 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 32

Conread position: 2-205
Cow position: chr25:12204412-12204185 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 2-205
Cow position: chr25:25948456-25948680 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 2-206
Cow position: chr25:16064832-16064611 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 87, 93

Conread position: 5-205
Cow position: chr25:6464092-6464314 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 6-200
Cow position: chr25:36124618-36124420 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 118

Conread position: 8-210
Cow position: chr25:27521067-27521278 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 13

Conread position: 11-205
Cow position: chr25:11054838-11054643 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 78, 49

Conread position: 20-205
Cow position: chr25:6803476-6803279 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 24

Conread position: 20-205
Cow position: chr25:26523889-26523694 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 13

Conread position: 23-229
Cow position: chr25:22549714-22549923 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 33

Conread position: 34-199
Cow position: chr25:22241891-22241727 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 82

Conread position: 41-203
Cow position: chr25:35076780-35076943 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 12

Conread position: 202-504
Cow position: chr25:12097878-12097587 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 21

Conread position: 207-504
Cow position: chr25:5515056-5514752 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 154

Conread position: 216-496
Cow position: chr25:11585547-11585271 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 24

Conread position: 216-504
Cow position: chr25:36535404-36535687 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 24

Conread position: 217-497
Cow position: chr25:16319108-16319380 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 22, 7

Conread position: 222-498
Cow position: chr25:15695008-15694734 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 29, 21

Conread position: 255-504
Cow position: chr25:9961181-9961433 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 55, 26

Conread position: 267-497
Cow position: chr25:16001543-16001769 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 90

Conread position: 267-504
Cow position: chr25:6885993-6886232 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 19

Conread position: 268-501
Cow position: chr25:36026988-36026755 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 42, 21

Conread position: 270-459
Cow position: chr25:36779474-36779282 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 16

Conread position: 270-504
Cow position: chr25:26654888-26654652 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 153

Conread position: 271-477
Cow position: chr25:10218070-10218279 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 135

Conread position: 271-504
Cow position: chr25:12204447-12204215 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 125

Conread position: 271-504
Cow position: chr25:28187969-28188203 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 125

Conread position: 271-504
Cow position: chr25:40321320-40321547 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 57

Conread position: 272-504
Cow position: chr25:14833685-14833908 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 82

Conread position: 274-486
Cow position: chr25:7329520-7329308 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 28

Conread position: 275-501
Cow position: chr25:10365779-10366004 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 142

Conread position: 276-504
Cow position: chr25:1838209-1837985 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 22

Conread position: 281-501
Cow position: chr25:10643342-10643562 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 33

Conread position: 283-497
Cow position: chr25:4002766-4002548 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 120

Conread position: 287-504
Cow position: chr25:4547756-4547975 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 74

Conread position: 292-504
Cow position: chr25:15319875-15319666 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 18, 77

Conread position: 298-485
Cow position: chr25:61609-61421 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 107

Conread position: 298-490
Cow position: chr25:21289297-21289099 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 298-498
Cow position: chr25:8918327-8918527 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 16

Conread position: 298-499
Cow position: chr25:19679294-19679092 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 47

Conread position: 298-503
Cow position: chr25:12824069-12824268 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 76

Conread position: 298-504
Cow position: chr25:13642361-13642571 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 109

Conread position: 298-504
Cow position: chr25:17566538-17566332 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 91

Conread position: 298-504
Cow position: chr25:36081827-36081619 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 72

Conread position: 299-504
Cow position: chr25:21192985-21193198 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 64

Conread position: 305-493
Cow position: chr25:18988326-18988132 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 305-496
Cow position: chr25:6255996-6256183 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 49

Conread position: 305-504
Cow position: chr25:6474157-6474353 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 307-493
Cow position: chr25:1735375-1735560 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 307-501
Cow position: chr25:5791861-5792058 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 180

Conread position: 307-501
Cow position: chr25:14791692-14791500 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 60

Conread position: 307-501
Cow position: chr25:26087459-26087263 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position: chr25:5846870-5847061 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 49

Conread position: 307-504
Cow position: chr25:6003053-6003246 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 307-504
Cow position: chr25:7581486-7581682 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 45

Conread position: 307-504
Cow position: chr25:7801077-7800881 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 30

Conread position: 307-504
Cow position: chr25:11436872-11437057 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 30

Conread position: 307-504
Cow position: chr25:12817314-12817118 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 181, 0

Conread position: 307-504
Cow position: chr25:14196798-14196600 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position: chr25:17712475-17712279 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 44

Conread position: 307-504
Cow position: chr25:20402774-20402974 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 180

Conread position: 307-504
Cow position: chr25:21245665-21245861 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 97

Conread position: 307-504
Cow position: chr25:26238809-26238616 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 60

Conread position: 307-504
Cow position: chr25:31732795-31732991 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 47

Conread position: 307-504
Cow position: chr25:33691494-33691299 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 14

Conread position: 308-504
Cow position: chr25:7306239-7306043 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 44, 51

Conread position: 308-504
Cow position: chr25:20060089-20060286 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 46

Conread position: 311-504
Cow position: chr25:24167967-24168153 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 57

Conread position: 314-504
Cow position: chr25:25051449-25051639 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 77

Conread position: 315-486
Cow position: chr25:21894956-21895123 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 52, 37

Conread position: 316-495
Cow position: chr25:16921862-16922040 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 316-498
Cow position: chr25:21209017-21209197 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 13

Conread position: 316-504
Cow position: chr25:18448769-18448582 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 316-504
Cow position: chr25:21266939-21266751 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 84

Conread position: 318-504
Cow position: chr25:20023462-20023652 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 51

Conread position: 330-504
Cow position: chr25:10138012-10137843 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 36

Conread position: 330-504
Cow position: chr25:17658529-17658360 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 11

Conread position: 352-504
Cow position: chr25:9842898-9842745 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 98

Show alignments to all cow chromosomes.