Cow genome map


           Conread name:
           Ss1.1-Pig2-104J14.5
        

               Conread position:
               1-106
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-111
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-111
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               1-120
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 92
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               88, 104
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 57
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 211
               

               Conread position:
               2-126
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               2-152
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               2-190
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               87, 93
               

               Conread position:
               5-205
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               6-200
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               66, 118
               

               Conread position:
               8-210
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               11-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               20-205
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               20-205
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               23-229
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               34-199
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               41-203
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               202-504
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 21
               

               Conread position:
               207-504
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 154
               

               Conread position:
               216-496
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               216-504
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               217-497
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               222-498
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               255-504
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               267-497
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               267-504
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               268-501
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               270-459
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               270-504
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 153
               

               Conread position:
               271-477
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               271-504
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               271-504
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               271-504
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 57
               

               Conread position:
               272-504
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 82
               

               Conread position:
               274-486
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               275-501
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 142
               

               Conread position:
               276-504
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               281-501
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 33
               

               Conread position:
               283-497
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 120
               

               Conread position:
               287-504
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               292-504
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               298-485
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 107
               

               Conread position:
               298-490
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               298-498
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               298-499
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               298-503
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 76
               

               Conread position:
               298-504
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 109
               

               Conread position:
               298-504
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               298-504
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               299-504
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               305-493
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               305-496
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               305-504
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               307-493
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               307-501
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 180
               

               Conread position:
               307-501
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               307-501
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 180
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 97
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 60
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               307-504
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               308-504
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 51
               

               Conread position:
               308-504
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               50, 46
               

               Conread position:
               311-504
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               314-504
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 77
               

               Conread position:
               315-486
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               316-495
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               316-498
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               316-504
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               316-504
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               134, 84
               

               Conread position:
               318-504
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               330-504
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               330-504
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               352-504
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 98
               
Show alignments to all cow chromosomes.