Cow genome map

Conread name: Ss1.1-Pig2-104J14.5

Conread position: 1-101
Cow position:
Alignm length: 101
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-106
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 58

Conread position: 1-111
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-116
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 80

Conread position: 1-119
Cow position:
Alignm length: 123
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 111

Conread position: 1-119
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 115

Conread position: 1-119
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 59

Conread position: 1-119
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 1-187
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1-188
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 1-190
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 56

Conread position: 1-190
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-191
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 21

Conread position: 1-196
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 62, 52

Conread position: 1-201
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 50

Conread position: 1-201
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 60

Conread position: 1-201
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 64, 124

Conread position: 1-203
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-203
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 32

Conread position: 1-205
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 107, 59

Conread position: 1-205
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 30

Conread position: 1-205
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 1-210
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 174

Conread position: 1-215
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 78

Conread position: 2-110
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 2-123
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 66

Conread position: 2-191
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 82

Conread position: 2-203
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 58

Conread position: 2-205
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 58

Conread position: 3-118
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 57

Conread position: 3-200
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 64

Conread position: 3-205
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 54

Conread position: 3-205
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 3-205
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 58

Conread position: 4-186
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 6-117
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 6-180
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 59

Conread position: 6-205
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 11-189
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 14-211
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 52

Conread position: 15-200
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 49

Conread position: 22-117
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 91

Conread position: 34-205
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 162

Conread position: 235-504
Cow position:
Alignm length: 274
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 54

Conread position: 250-501
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 43

Conread position: 250-504
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 25

Conread position: 253-504
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 154

Conread position: 264-483
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 112

Conread position: 267-504
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 269-504
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 29

Conread position: 271-489
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 135

Conread position: 272-504
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 120

Conread position: 273-504
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 95

Conread position: 273-504
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 46

Conread position: 274-501
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 36, 54

Conread position: 274-504
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 103

Conread position: 275-504
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 95

Conread position: 275-504
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 83

Conread position: 275-504
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 14

Conread position: 276-501
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 53

Conread position: 277-504
Cow position:
Alignm length: 233
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 106

Conread position: 283-501
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 51

Conread position: 286-498
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 83

Conread position: 289-498
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 64, 25

Conread position: 289-504
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 9

Conread position: 295-460
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 60

Conread position: 297-504
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 17

Conread position: 298-489
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 72

Conread position: 298-494
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 74

Conread position: 298-499
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 107

Conread position: 298-499
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 192

Conread position: 298-500
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 57

Conread position: 298-501
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 13

Conread position: 298-504
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 102

Conread position: 298-504
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 13

Conread position: 298-504
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 48

Conread position: 298-504
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 17, 70

Conread position: 298-504
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 91

Conread position: 298-504
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 91

Conread position: 298-504
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 57

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 64

Conread position: 298-504
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 33

Conread position: 299-485
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 93

Conread position: 300-500
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 14

Conread position: 302-501
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 36

Conread position: 306-504
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 61

Conread position: 307-493
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 45

Conread position: 307-498
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 76

Conread position: 307-498
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 60

Conread position: 307-499
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 47

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 74

Conread position: 307-501
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 147

Conread position: 307-501
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 183

Conread position: 307-501
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 60

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 60

Conread position: 307-504
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 47

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 60

Conread position: 307-504
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 47

Conread position: 307-504
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 109

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 60

Conread position: 307-504
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 78

Conread position: 308-504
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 6, 66

Conread position: 310-494
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 160

Conread position: 314-504
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 53

Conread position: 316-504
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 40

Conread position: 316-504
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 50

Conread position: 318-504
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 36

Conread position: 330-504
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 22

Conread position: 330-504
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 102

Conread position: 331-498
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 59

Conread position: 342-504
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.