Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-192
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 72

Conread position: 1-229
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 74

Conread position: 1-229
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 83

Conread position: 1-230
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 92

Conread position: 1-235
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 72

Conread position: 1-489
Cow position:
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 74

Conread position: 1-545
Cow position:
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 1-551
Cow position:
Alignm length: 582
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 1-558
Cow position:
Alignm length: 588
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 1-575
Cow position:
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 32

Conread position: 103-347
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 95

Conread position: 103-386
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 101

Conread position: 107-568
Cow position:
Alignm length: 494
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 90

Conread position: 108-575
Cow position:
Alignm length: 507
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 243

Conread position: 111-473
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 85

Conread position: 119-431
Cow position:
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 10

Conread position: 133-579
Cow position:
Alignm length: 455
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 356, 297

Conread position: 173-552
Cow position:
Alignm length: 385
Alignm identity: 254
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 39

Conread position: 184-544
Cow position:
Alignm length: 367
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 16

Conread position: 213-465
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 190

Conread position: 219-543
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 71

Conread position: 221-488
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 28

Conread position: 228-551
Cow position:
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 173

Conread position: 228-551
Cow position:
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 168

Conread position: 228-565
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 229-545
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 29

Conread position: 229-551
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 13

Conread position: 229-551
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 34, 129

Conread position: 229-569
Cow position:
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 289

Conread position: 232-400
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 232-579
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 234-368
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 84

Conread position: 234-569
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 36, 69

Conread position: 249-563
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 65

Conread position: 250-566
Cow position:
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 262-536
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 0

Conread position: 267-545
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 272-541
Cow position:
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 276-567
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 278-486
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 14

Conread position: 285-551
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 15, 21

Conread position: 292-531
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 17

Conread position: 292-546
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 108

Conread position: 295-561
Cow position:
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 81

Conread position: 296-545
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 34

Conread position: 299-549
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 50, 119

Conread position: 302-565
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 20

Conread position: 304-541
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 304-553
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 49, 86

Conread position: 306-513
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 17

Conread position: 319-524
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 321-579
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 92, 12

Conread position: 325-532
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 326-489
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 72

Conread position: 336-550
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 64

Conread position: 337-488
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 349-559
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 117, 49

Conread position: 351-500
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 351-522
Cow position:
Alignm length: 177
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 28

Conread position: 355-542
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 28

Conread position: 355-542
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 135, 27

Conread position: 361-545
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 369-560
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 26

Conread position: 379-546
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 15

Conread position: 388-557
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 107

Conread position: 396-553
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 12

Conread position: 405-545
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 44

Conread position: 412-542
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 415-551
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 422-571
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 66, 136

Conread position: 425-574
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 96

Conread position: 428-547
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 22

Show alignments to all cow chromosomes.