Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-196
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 75

Conread position: 1-431
Cow position:
Alignm length: 464
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 19

Conread position: 1-545
Cow position:
Alignm length: 570
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 1-553
Cow position:
Alignm length: 572
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 19

Conread position: 1-567
Cow position:
Alignm length: 606
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 1-569
Cow position:
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 34

Conread position: 1-584
Cow position:
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 74

Conread position: 3-235
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 70

Conread position: 3-544
Cow position:
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 78

Conread position: 4-541
Cow position:
Alignm length: 557
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 71

Conread position: 7-488
Cow position:
Alignm length: 493
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 66

Conread position: 20-559
Cow position:
Alignm length: 558
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 13

Conread position: 50-488
Cow position:
Alignm length: 464
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 100-314
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 92

Conread position: 100-419
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 70

Conread position: 100-449
Cow position:
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 137

Conread position: 103-507
Cow position:
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 328

Conread position: 103-515
Cow position:
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 106-476
Cow position:
Alignm length: 391
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 19

Conread position: 113-505
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 120-493
Cow position:
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 80

Conread position: 180-551
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 34

Conread position: 183-400
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 26

Conread position: 184-514
Cow position:
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 148

Conread position: 184-520
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 29

Conread position: 184-559
Cow position:
Alignm length: 389
Alignm identity: 259
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 80, 37

Conread position: 185-532
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 24

Conread position: 210-466
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 63, 258

Conread position: 221-448
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 57

Conread position: 221-527
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 58

Conread position: 225-532
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 5

Conread position: 228-385
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 15

Conread position: 228-546
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 73

Conread position: 229-395
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 115

Conread position: 229-522
Cow position:
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 145

Conread position: 229-545
Cow position:
Alignm length: 329
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 103

Conread position: 229-569
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 229-569
Cow position:
Alignm length: 355
Alignm identity: 238
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 230-544
Cow position:
Alignm length: 324
Alignm identity: 210
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 163

Conread position: 230-559
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 51

Conread position: 231-500
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 87

Conread position: 231-545
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 259, 73

Conread position: 231-551
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 32, 108

Conread position: 232-546
Cow position:
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 101

Conread position: 232-583
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 64

Conread position: 233-419
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 98

Conread position: 234-531
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 236-527
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 166

Conread position: 240-551
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 59

Conread position: 240-570
Cow position:
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 40

Conread position: 252-531
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 9

Conread position: 254-509
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 26

Conread position: 254-575
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 262-544
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 226, 54

Conread position: 276-564
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 195

Conread position: 277-551
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 44

Conread position: 284-482
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 70, 11

Conread position: 285-533
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 285-569
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 167

Conread position: 292-510
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 74

Conread position: 292-551
Cow position:
Alignm length: 265
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 151

Conread position: 292-554
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 55

Conread position: 295-551
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 81

Conread position: 296-584
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 263

Conread position: 303-487
Cow position:
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 102

Conread position: 334-574
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 219

Conread position: 336-553
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 337-551
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 23

Conread position: 346-532
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 30

Conread position: 350-516
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 21

Conread position: 351-550
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 22

Conread position: 351-568
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 87

Conread position: 358-551
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 362-568
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 371-553
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 374-551
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 114, 29

Conread position: 396-545
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 423-541
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 35

Show alignments to all cow chromosomes.