Cow genome map


           Conread name:
           Ss1.1-Pig2-119N20.5
        

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 84
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 99
               

               Conread position:
               1-442
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 74
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               1-545
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 74
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 9
               

               Conread position:
               1-554
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 74
               

               Conread position:
               1-559
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               1-569
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 73
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 74
               

               Conread position:
               4-514
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 70
               

               Conread position:
               7-551
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 72
               

               Conread position:
               51-554
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               100-353
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 94
               

               Conread position:
               100-433
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               27, 198
               

               Conread position:
               102-543
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               106-494
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               106-584
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 109
               

               Conread position:
               181-584
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 114
               

               Conread position:
               184-540
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               185-565
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               190-551
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               219-560
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               229-425
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 88
               

               Conread position:
               229-478
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 163
               

               Conread position:
               229-566
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 56
               

               Conread position:
               230-551
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 53
               

               Conread position:
               230-571
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               233-579
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               235-551
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               237-544
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 158
               

               Conread position:
               237-553
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 298
               

               Conread position:
               239-491
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               242-404
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               242-496
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               242-567
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 76
               

               Conread position:
               246-542
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               250-528
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 130
               

               Conread position:
               251-546
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               253-415
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 139
               

               Conread position:
               254-441
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               255-544
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               285-488
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               285-551
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               292-551
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               294-584
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 72
               

               Conread position:
               296-551
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               297-475
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               58, 80
               

               Conread position:
               297-554
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               191, 57
               

               Conread position:
               299-545
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 61
               

               Conread position:
               299-559
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               104, 139
               

               Conread position:
               318-584
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 80
               

               Conread position:
               324-562
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               330-551
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               332-572
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               346-488
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               349-565
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               353-546
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               358-545
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               130, 47
               

               Conread position:
               388-551
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               394-554
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               95, 19
               
Show alignments to all cow chromosomes.