Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-305
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 28

Conread position: 1-371
Cow position:
Alignm length: 407
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 1-488
Cow position:
Alignm length: 522
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 48

Conread position: 1-524
Cow position:
Alignm length: 567
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 74

Conread position: 1-544
Cow position:
Alignm length: 566
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 45

Conread position: 1-551
Cow position:
Alignm length: 587
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 18

Conread position: 1-551
Cow position:
Alignm length: 586
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 2-286
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 71

Conread position: 2-385
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 128, 64

Conread position: 2-546
Cow position:
Alignm length: 580
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 4-241
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 69

Conread position: 13-545
Cow position:
Alignm length: 564
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 87

Conread position: 14-546
Cow position:
Alignm length: 558
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 46

Conread position: 102-553
Cow position:
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 57

Conread position: 103-551
Cow position:
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 108-554
Cow position:
Alignm length: 467
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 92

Conread position: 126-551
Cow position:
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 73

Conread position: 164-520
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 282

Conread position: 173-551
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 25

Conread position: 183-554
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 22

Conread position: 189-552
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 221-454
Cow position:
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 59

Conread position: 228-522
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 229-432
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 229-464
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 186

Conread position: 229-516
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 52

Conread position: 229-542
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 21

Conread position: 229-545
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 59

Conread position: 229-550
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 61

Conread position: 229-551
Cow position:
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 232-431
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 52

Conread position: 232-527
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 233-470
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 57

Conread position: 233-544
Cow position:
Alignm length: 333
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 32

Conread position: 233-551
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 30, 167

Conread position: 234-530
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 31, 233

Conread position: 234-545
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 80

Conread position: 235-545
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 99

Conread position: 235-551
Cow position:
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 74

Conread position: 235-553
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 164

Conread position: 236-579
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 27, 48

Conread position: 242-528
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 245-545
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 112

Conread position: 245-551
Cow position:
Alignm length: 312
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 216

Conread position: 245-551
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 248-553
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 15, 71

Conread position: 249-551
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 35

Conread position: 253-545
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 146

Conread position: 262-551
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 125

Conread position: 276-458
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 12

Conread position: 279-551
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 10

Conread position: 284-449
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 12

Conread position: 285-520
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 38

Conread position: 290-560
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 24

Conread position: 292-565
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 295-543
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 296-551
Cow position:
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 258

Conread position: 297-488
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 30

Conread position: 309-551
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 51

Conread position: 313-521
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 318-551
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 122

Conread position: 341-529
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 344-573
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 23

Conread position: 387-559
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 72

Conread position: 392-569
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 13

Conread position: 394-551
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 117

Conread position: 398-551
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 405-547
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 141

Conread position: 411-551
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 430-551
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 10

Show alignments to all cow chromosomes.