Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-213
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 72

Conread position: 1-223
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 59

Conread position: 1-229
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 59

Conread position: 1-235
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 129, 32

Conread position: 1-338
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 163, 77

Conread position: 1-372
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 86

Conread position: 1-545
Cow position:
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 74

Conread position: 1-545
Cow position:
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 74

Conread position: 1-551
Cow position:
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 1-556
Cow position:
Alignm length: 585
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 38

Conread position: 1-557
Cow position:
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 1-579
Cow position:
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 82

Conread position: 2-543
Cow position:
Alignm length: 574
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 98

Conread position: 2-545
Cow position:
Alignm length: 572
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 74

Conread position: 2-576
Cow position:
Alignm length: 608
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 3-230
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 26

Conread position: 3-298
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 13-551
Cow position:
Alignm length: 568
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 62

Conread position: 27-356
Cow position:
Alignm length: 357
Alignm identity: 250
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 100, 26

Conread position: 29-524
Cow position:
Alignm length: 527
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 33-347
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 43

Conread position: 53-568
Cow position:
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 22

Conread position: 103-407
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 57

Conread position: 103-568
Cow position:
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 106-230
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 28

Conread position: 111-407
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 159-551
Cow position:
Alignm length: 414
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 183-545
Cow position:
Alignm length: 387
Alignm identity: 254
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 126

Conread position: 184-439
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 30

Conread position: 185-552
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 24, 195

Conread position: 186-559
Cow position:
Alignm length: 394
Alignm identity: 257
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 25

Conread position: 229-567
Cow position:
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 146

Conread position: 229-568
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 229-584
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 69

Conread position: 232-515
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 75, 44

Conread position: 232-551
Cow position:
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 181

Conread position: 233-531
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 106

Conread position: 233-557
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 48

Conread position: 234-404
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 234-544
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 94

Conread position: 235-569
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 236-555
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 293

Conread position: 254-563
Cow position:
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 194

Conread position: 254-567
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 64

Conread position: 262-542
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 87, 37

Conread position: 262-551
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 221, 59

Conread position: 270-540
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 82, 114

Conread position: 272-471
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 137, 60

Conread position: 285-494
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 67, 105

Conread position: 285-522
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 67, 96

Conread position: 292-551
Cow position:
Alignm length: 270
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 293-557
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 62, 97

Conread position: 295-532
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 104

Conread position: 295-546
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 192

Conread position: 312-550
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 241

Conread position: 313-557
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 6

Conread position: 319-545
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 63

Conread position: 320-564
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 326-546
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 333-545
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 56

Conread position: 336-583
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 40

Conread position: 337-474
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 118

Conread position: 342-545
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 152, 0

Conread position: 360-533
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 131, 45

Conread position: 361-570
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 105

Conread position: 361-570
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 406-565
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 25

Conread position: 408-567
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 84

Conread position: 412-551
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 438-588
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 33

Show alignments to all cow chromosomes.