Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-230
Cow position: chr22:45291526-45291757 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 28

Conread position: 1-370
Cow position: chr22:14508566-14508181 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 84, 93

Conread position: 1-561
Cow position: chr22:7281235-7281821 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 12

Conread position: 1-584
Cow position: chr22:25457863-25458462 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 19

Conread position: 2-392
Cow position: chr22:28755481-28755084 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 67

Conread position: 10-230
Cow position: chr22:15696182-15696404 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 36

Conread position: 103-530
Cow position: chr22:4057894-4058353 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 330

Conread position: 103-545
Cow position: chr22:32018513-32018042 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 424

Conread position: 186-547
Cow position: chr22:8714080-8714443 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 22

Conread position: 228-408
Cow position: chr22:39904560-39904384 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 54

Conread position: 228-553
Cow position: chr22:29064594-29064920 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 229-407
Cow position: chr22:47385689-47385513 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 132

Conread position: 229-528
Cow position: chr22:5715038-5714755 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 9

Conread position: 229-551
Cow position: chr22:42421485-42421171 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 6, 76

Conread position: 229-568
Cow position: chr22:14730290-14729949 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 74

Conread position: 230-516
Cow position: chr22:15873575-15873849 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 17

Conread position: 230-567
Cow position: chr22:44637846-44638189 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 46

Conread position: 231-504
Cow position: chr22:13083302-13083564 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 28, 51

Conread position: 232-551
Cow position: chr22:45327406-45327736 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 286

Conread position: 234-488
Cow position: chr22:15890176-15890428 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 138

Conread position: 234-539
Cow position: chr22:34649496-34649799 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 176

Conread position: 234-545
Cow position: chr22:41321568-41321883 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 148

Conread position: 235-438
Cow position: chr22:246578-246779 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 86

Conread position: 235-522
Cow position: chr22:20444577-20444860 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 63

Conread position: 235-551
Cow position: chr22:4932154-4932480 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 217

Conread position: 239-569
Cow position: chr22:12537320-12536977 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 243-567
Cow position: chr22:44037453-44037775 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 47

Conread position: 251-557
Cow position: chr22:34087248-34086930 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 90

Conread position: 286-494
Cow position: chr22:45497026-45497244 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 286-535
Cow position: chr22:45787892-45787649 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 126

Conread position: 292-488
Cow position: chr22:23681046-23681248 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 164

Conread position: 293-507
Cow position: chr22:22495826-22496028 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 184, 65

Conread position: 299-545
Cow position: chr22:5358649-5358900 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 75

Conread position: 307-529
Cow position: chr22:12627941-12627713 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 47, 152

Conread position: 312-559
Cow position: chr22:39424291-39424537 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 96

Conread position: 320-546
Cow position: chr22:22010644-22010415 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 85

Conread position: 322-554
Cow position: chr22:24436005-24435766 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 65

Conread position: 332-545
Cow position: chr22:44687302-44687529 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 351-544
Cow position: chr22:32355659-32355471 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 133, 36

Conread position: 351-567
Cow position: chr22:11749174-11748972 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 352-579
Cow position: chr22:29004916-29004683 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 156

Conread position: 358-551
Cow position: chr22:1532961-1533158 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 362-552
Cow position: chr22:24257367-24257173 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 11

Conread position: 374-546
Cow position: chr22:40046484-40046653 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 24

Conread position: 380-554
Cow position: chr22:45788075-45787898 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 23

Conread position: 396-551
Cow position: chr22:32696131-32696285 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 48

Show alignments to all cow chromosomes.