Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-230
Cow position: chr24:19627328-19627564 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 79, 72

Conread position: 1-230
Cow position: chr24:36853321-36853560 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 101, 67

Conread position: 1-301
Cow position: chr24:43492505-43492195 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 96, 56

Conread position: 1-521
Cow position: chr24:25246035-25246574 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 72

Conread position: 1-539
Cow position: chr24:37386347-37385809 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 45

Conread position: 1-541
Cow position: chr24:17763267-17762704 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 1-551
Cow position: chr24:42817258-42817836 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 1-553
Cow position: chr24:41405315-41404758 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 67

Conread position: 1-568
Cow position: chr24:6177394-6177989 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 3-559
Cow position: chr24:43351097-43350511 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 70

Conread position: 25-474
Cow position: chr24:38643635-38644117 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 332
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 60, 50

Conread position: 39-545
Cow position: chr24:6424017-6423508 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 36

Conread position: 103-551
Cow position: chr24:31301560-31301106 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 199

Conread position: 103-554
Cow position: chr24:14913466-14913002 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 8

Conread position: 108-336
Cow position: chr24:36551252-36551004 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 113-543
Cow position: chr24:35835909-35835472 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 235

Conread position: 117-553
Cow position: chr24:32579293-32579749 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 211

Conread position: 141-399
Cow position: chr24:15474831-15475107 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 54

Conread position: 184-503
Cow position: chr24:31845632-31845294 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 199-450
Cow position: chr24:25966834-25967084 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 64, 22

Conread position: 216-392
Cow position: chr24:29070249-29070072 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 16

Conread position: 228-488
Cow position: chr24:36853603-36853856 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 55

Conread position: 229-487
Cow position: chr24:21714956-21714693 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 147

Conread position: 229-507
Cow position: chr24:9867223-9866941 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 171, 87

Conread position: 229-512
Cow position: chr24:30144376-30144648 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 48

Conread position: 230-583
Cow position: chr24:36097714-36098072 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 8

Conread position: 232-405
Cow position: chr24:37074688-37074513 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 65

Conread position: 235-353
Cow position: chr24:25343315-25343430 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 49

Conread position: 236-396
Cow position: chr24:23820393-23820233 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 14

Conread position: 245-560
Cow position: chr24:33274122-33274434 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 39

Conread position: 250-582
Cow position: chr24:30899559-30899218 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 82

Conread position: 262-551
Cow position: chr24:19627696-19628004 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 262-569
Cow position: chr24:16552725-16552415 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 136, 30

Conread position: 276-463
Cow position: chr24:36098886-36098701 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 121

Conread position: 299-579
Cow position: chr24:43491392-43491108 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 55, 106

Conread position: 301-550
Cow position: chr24:1295946-1295692 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 88

Conread position: 304-518
Cow position: chr24:620882-621097 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 21

Conread position: 324-546
Cow position: chr24:16331805-16332038 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 169

Conread position: 335-544
Cow position: chr24:25934908-25935134 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 205

Conread position: 342-551
Cow position: chr24:36550712-36550497 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 116

Conread position: 342-556
Cow position: chr24:28599012-28598796 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 147

Conread position: 351-554
Cow position: chr24:3088987-3089203 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 145

Conread position: 351-565
Cow position: chr24:44484025-44483814 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 22

Conread position: 371-569
Cow position: chr24:42338771-42338976 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 383-567
Cow position: chr24:39384545-39384359 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 22

Conread position: 408-558
Cow position: chr24:26906331-26906484 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 145

Conread position: 414-545
Cow position: chr24:23012942-23013075 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.