Cow genome map
Conread name: | Ss1.1-Pig2-119N20.5 |
Conread position: | 1-230 |
Cow position: | chr24:19627328-19627564 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 79, 72 |
Conread position: | 1-230 |
Cow position: | chr24:36853321-36853560 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 175 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 101, 67 |
Conread position: | 1-301 |
Cow position: | chr24:43492505-43492195 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 224 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 96, 56 |
Conread position: | 1-521 |
Cow position: | chr24:25246035-25246574 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 72 |
Conread position: | 1-539 |
Cow position: | chr24:37386347-37385809 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 45 |
Conread position: | 1-541 |
Cow position: | chr24:17763267-17762704 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 1-551 |
Cow position: | chr24:42817258-42817836 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 72 |
Conread position: | 1-553 |
Cow position: | chr24:41405315-41404758 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 67 |
Conread position: | 1-568 |
Cow position: | chr24:6177394-6177989 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 74 |
Conread position: | 3-559 |
Cow position: | chr24:43351097-43350511 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 70 |
Conread position: | 25-474 |
Cow position: | chr24:38643635-38644117 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 332 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 60, 50 |
Conread position: | 39-545 |
Cow position: | chr24:6424017-6423508 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 36 |
Conread position: | 103-551 |
Cow position: | chr24:31301560-31301106 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 199 |
Conread position: | 103-554 |
Cow position: | chr24:14913466-14913002 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 8 |
Conread position: | 108-336 |
Cow position: | chr24:36551252-36551004 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 188 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 113-543 |
Cow position: | chr24:35835909-35835472 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 235 |
Conread position: | 117-553 |
Cow position: | chr24:32579293-32579749 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 211 |
Conread position: | 141-399 |
Cow position: | chr24:15474831-15475107 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 200 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 25, 54 |
Conread position: | 184-503 |
Cow position: | chr24:31845632-31845294 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 228 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 199-450 |
Cow position: | chr24:25966834-25967084 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 185 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 64, 22 |
Conread position: | 216-392 |
Cow position: | chr24:29070249-29070072 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 127 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 47, 16 |
Conread position: | 228-488 |
Cow position: | chr24:36853603-36853856 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 197 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 41, 55 |
Conread position: | 229-487 |
Cow position: | chr24:21714956-21714693 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 204 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 33, 147 |
Conread position: | 229-507 |
Cow position: | chr24:9867223-9866941 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 210 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 171, 87 |
Conread position: | 229-512 |
Cow position: | chr24:30144376-30144648 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 196 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 36, 48 |
Conread position: | 230-583 |
Cow position: | chr24:36097714-36098072 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 256 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 33, 8 |
Conread position: | 232-405 |
Cow position: | chr24:37074688-37074513 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 128 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 39, 65 |
Conread position: | 235-353 |
Cow position: | chr24:25343315-25343430 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 28, 49 |
Conread position: | 236-396 |
Cow position: | chr24:23820393-23820233 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 14 |
Conread position: | 245-560 |
Cow position: | chr24:33274122-33274434 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 39 |
Conread position: | 250-582 |
Cow position: | chr24:30899559-30899218 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 82 |
Conread position: | 262-551 |
Cow position: | chr24:19627696-19628004 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 50 |
Conread position: | 262-569 |
Cow position: | chr24:16552725-16552415 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 217 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 136, 30 |
Conread position: | 276-463 |
Cow position: | chr24:36098886-36098701 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 140 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 76, 121 |
Conread position: | 299-579 |
Cow position: | chr24:43491392-43491108 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 207 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 55, 106 |
Conread position: | 301-550 |
Cow position: | chr24:1295946-1295692 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 88 |
Conread position: | 304-518 |
Cow position: | chr24:620882-621097 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 49, 21 |
Conread position: | 324-546 |
Cow position: | chr24:16331805-16332038 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 165 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 30, 169 |
Conread position: | 335-544 |
Cow position: | chr24:25934908-25935134 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 18, 205 |
Conread position: | 342-551 |
Cow position: | chr24:36550712-36550497 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 166 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 56, 116 |
Conread position: | 342-556 |
Cow position: | chr24:28599012-28598796 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 17, 147 |
Conread position: | 351-554 |
Cow position: | chr24:3088987-3089203 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 44, 145 |
Conread position: | 351-565 |
Cow position: | chr24:44484025-44483814 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 159 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 135, 22 |
Conread position: | 371-569 |
Cow position: | chr24:42338771-42338976 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 160 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 383-567 |
Cow position: | chr24:39384545-39384359 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 94, 22 |
Conread position: | 408-558 |
Cow position: | chr24:26906331-26906484 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 53, 145 |
Conread position: | 414-545 |
Cow position: | chr24:23012942-23013075 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.