Cow genome map
| Conread name: | Ss1.1-Pig2-119N20.5 |
| Conread position: | 1-288 |
| Cow position: | chr26:15558545-15558838 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 1-351 |
| Cow position: | chr26:4560210-4559848 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 71 |
| Conread position: | 1-542 |
| Cow position: | chr26:14364045-14363499 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 1-551 |
| Cow position: | chr26:28421723-28421146 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 1-553 |
| Cow position: | chr26:16214302-16214876 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 77 |
| Conread position: | 1-554 |
| Cow position: | chr26:30603064-30602496 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 2-279 |
| Cow position: | chr26:12069655-12069930 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 3-234 |
| Cow position: | chr26:22161822-22161584 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 94, 70 |
| Conread position: | 3-547 |
| Cow position: | chr26:15632528-15633084 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 8-206 |
| Cow position: | chr26:15938883-15939083 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 20-544 |
| Cow position: | chr26:14509791-14509246 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 113-551 |
| Cow position: | chr26:19492910-19493344 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 128 |
| Conread position: | 184-462 |
| Cow position: | chr26:33214577-33214304 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 121, 29 |
| Conread position: | 184-553 |
| Cow position: | chr26:3311660-3311268 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 81, 29 |
| Conread position: | 227-545 |
| Cow position: | chr26:5718067-5717744 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 224 |
| Conread position: | 229-407 |
| Cow position: | chr26:4651048-4651229 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 229-543 |
| Cow position: | chr26:6819042-6818717 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 118, 32 |
| Conread position: | 231-395 |
| Cow position: | chr26:16510784-16510952 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 231-544 |
| Cow position: | chr26:14081672-14081975 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 124, 169 |
| Conread position: | 232-555 |
| Cow position: | chr26:4663789-4663475 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 234-543 |
| Cow position: | chr26:21013649-21013962 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 229 |
| Conread position: | 241-575 |
| Cow position: | chr26:34037944-34037603 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 269 |
| Conread position: | 243-507 |
| Cow position: | chr26:6828279-6828549 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 250-572 |
| Cow position: | chr26:18789521-18789847 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 137 |
| Conread position: | 251-555 |
| Cow position: | chr26:28864716-28864408 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 270-600 |
| Cow position: | chr26:12872049-12872366 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 138, 48 |
| Conread position: | 272-567 |
| Cow position: | chr26:5196826-5197125 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 285-545 |
| Cow position: | chr26:19958177-19958445 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 90 |
| Conread position: | 292-584 |
| Cow position: | chr26:22161186-22160902 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 185, 20 |
| Conread position: | 318-543 |
| Cow position: | chr26:2362412-2362631 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 319-543 |
| Cow position: | chr26:13346033-13346261 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 335-577 |
| Cow position: | chr26:1069057-1068804 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 142 |
| Conread position: | 342-550 |
| Cow position: | chr26:30011388-30011183 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 357-543 |
| Cow position: | chr26:5794109-5794296 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 124, 16 |
| Conread position: | 381-557 |
| Cow position: | chr26:4798347-4798527 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.