Cow genome map


           Conread name:
           Ss1.1-Pig2-119N20.5
        

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               96, 48
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               79, 72
               

               Conread position:
               1-416
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               165, 99
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               1-475
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               94, 74
               

               Conread position:
               1-542
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               1-545
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               1-546
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 83
               

               Conread position:
               2-375
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               2-435
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 71
               

               Conread position:
               3-337
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               3-554
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               5-551
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 41
               

               Conread position:
               12-545
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 75
               

               Conread position:
               103-544
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               103-584
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               104-251
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               106-471
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               112-545
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               307
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               120-410
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               190-488
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 110
               

               Conread position:
               203-545
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               210-556
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               210-571
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               26, 94
               

               Conread position:
               227-542
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               228-489
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               228-535
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               228-545
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 171
               

               Conread position:
               228-551
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 243
               

               Conread position:
               228-551
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               229-523
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               229-540
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 179
               

               Conread position:
               229-551
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               230-540
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               230-545
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               230-569
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               231-398
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               234-482
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 189
               

               Conread position:
               234-551
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 164
               

               Conread position:
               235-396
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               235-551
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               236-405
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               236-537
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               237-545
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 124
               

               Conread position:
               245-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 112
               

               Conread position:
               252-569
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               254-545
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               255-568
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 204
               

               Conread position:
               262-504
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               93, 22
               

               Conread position:
               262-551
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 63
               

               Conread position:
               262-551
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               92, 100
               

               Conread position:
               269-504
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               271-475
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               272-544
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               184, 57
               

               Conread position:
               275-493
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               279-551
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               198, 19
               

               Conread position:
               285-551
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               290-503
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               69, 101
               

               Conread position:
               291-551
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               292-545
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               292-552
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               298-582
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               299-559
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               300-582
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 60
               

               Conread position:
               303-540
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               326-535
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               327-547
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               328-553
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               328-553
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               332-557
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               333-546
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 72
               

               Conread position:
               339-488
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               342-551
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               351-513
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 35
               

               Conread position:
               357-535
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               357-579
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               379-569
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               24, 73
               

               Conread position:
               381-547
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               384-554
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               393-555
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 155
               

               Conread position:
               395-568
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               398-549
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               403-559
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.