Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-208
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 126, 71

Conread position: 1-314
Cow position:
Alignm length: 342
Alignm identity: 239
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 61

Conread position: 1-407
Cow position:
Alignm length: 441
Alignm identity: 287
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 74

Conread position: 1-514
Cow position:
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 71

Conread position: 1-516
Cow position:
Alignm length: 560
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 48

Conread position: 1-544
Cow position:
Alignm length: 566
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 104

Conread position: 1-551
Cow position:
Alignm length: 575
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 81

Conread position: 1-551
Cow position:
Alignm length: 580
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 1-554
Cow position:
Alignm length: 577
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 1-554
Cow position:
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 75

Conread position: 2-545
Cow position:
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 70

Conread position: 3-366
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 19

Conread position: 4-230
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 77

Conread position: 20-581
Cow position:
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 21

Conread position: 28-530
Cow position:
Alignm length: 519
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 103-507
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 105-532
Cow position:
Alignm length: 457
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 90

Conread position: 106-455
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 25

Conread position: 107-545
Cow position:
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 155-551
Cow position:
Alignm length: 413
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 8

Conread position: 173-474
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 224

Conread position: 179-562
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 183-549
Cow position:
Alignm length: 398
Alignm identity: 272
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 317

Conread position: 217-535
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 81

Conread position: 221-567
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 118

Conread position: 225-543
Cow position:
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 228

Conread position: 228-493
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 97

Conread position: 229-504
Cow position:
Alignm length: 282
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 57

Conread position: 229-509
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 34, 97

Conread position: 230-471
Cow position:
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 230-551
Cow position:
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 88

Conread position: 232-545
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 28

Conread position: 232-551
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 111

Conread position: 233-535
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 123, 49

Conread position: 236-541
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 11

Conread position: 236-545
Cow position:
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 111

Conread position: 236-579
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 27, 22

Conread position: 238-545
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 119

Conread position: 241-513
Cow position:
Alignm length: 287
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 175

Conread position: 243-396
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 245-463
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 67

Conread position: 251-510
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 174

Conread position: 253-579
Cow position:
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 58

Conread position: 262-510
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 13

Conread position: 268-496
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 88, 110

Conread position: 285-507
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 123, 85

Conread position: 285-545
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 198, 70

Conread position: 291-569
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 100

Conread position: 292-538
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 173

Conread position: 293-501
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 75

Conread position: 296-527
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 56, 26

Conread position: 297-577
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 192, 19

Conread position: 298-541
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 152

Conread position: 299-520
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 110

Conread position: 300-462
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 91

Conread position: 303-557
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 312-546
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 313-535
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 47

Conread position: 319-566
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 190

Conread position: 321-543
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 76

Conread position: 337-569
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 33

Conread position: 341-551
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 71

Conread position: 341-551
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 21, 71

Conread position: 342-564
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 45

Conread position: 352-546
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 131, 45

Conread position: 362-580
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 133

Conread position: 373-551
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 116, 20

Conread position: 379-551
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 142

Conread position: 403-544
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 83

Conread position: 405-543
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 408-558
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 409-551
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 412-541
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 418-545
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.