Cow genome map

Conread name: Ss1.1-Pig2-119N20.5

Conread position: 1-167
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 9

Conread position: 1-192
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 96, 71

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 73

Conread position: 1-226
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 104

Conread position: 1-448
Cow position:
Alignm length: 476
Alignm identity: 317
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 63

Conread position: 1-485
Cow position:
Alignm length: 514
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 1-540
Cow position:
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 20

Conread position: 1-542
Cow position:
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 57

Conread position: 1-551
Cow position:
Alignm length: 586
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 105

Conread position: 1-560
Cow position:
Alignm length: 581
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 12

Conread position: 1-572
Cow position:
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 82

Conread position: 1-579
Cow position:
Alignm length: 619
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 109

Conread position: 2-229
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 98

Conread position: 2-521
Cow position:
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 73

Conread position: 2-569
Cow position:
Alignm length: 579
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 73

Conread position: 3-163
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 70

Conread position: 16-506
Cow position:
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 103-304
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 195

Conread position: 103-331
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 97

Conread position: 107-550
Cow position:
Alignm length: 475
Alignm identity: 325
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 92

Conread position: 108-553
Cow position:
Alignm length: 466
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 120

Conread position: 109-513
Cow position:
Alignm length: 439
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 105

Conread position: 174-552
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 30

Conread position: 184-564
Cow position:
Alignm length: 400
Alignm identity: 258
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 27

Conread position: 210-535
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 210-542
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 67, 34

Conread position: 210-544
Cow position:
Alignm length: 348
Alignm identity: 240
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 60, 233

Conread position: 219-554
Cow position:
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 40

Conread position: 229-389
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 47

Conread position: 229-478
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 174

Conread position: 229-551
Cow position:
Alignm length: 330
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 29

Conread position: 229-571
Cow position:
Alignm length: 349
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 163

Conread position: 229-571
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 153

Conread position: 231-393
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 64

Conread position: 233-398
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 20

Conread position: 235-531
Cow position:
Alignm length: 311
Alignm identity: 221
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 28, 110

Conread position: 237-545
Cow position:
Alignm length: 315
Alignm identity: 215
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 43

Conread position: 239-432
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 239-559
Cow position:
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 45

Conread position: 262-541
Cow position:
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 81

Conread position: 262-553
Cow position:
Alignm length: 299
Alignm identity: 200
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 18

Conread position: 267-576
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 187

Conread position: 269-488
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 11

Conread position: 285-545
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 292-545
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 108

Conread position: 292-545
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 96

Conread position: 292-551
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 293-545
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 141

Conread position: 309-507
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 119

Conread position: 333-561
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 19, 228

Conread position: 336-524
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 336-583
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 339-556
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 18

Conread position: 354-514
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 63

Conread position: 372-551
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 114, 127

Conread position: 387-562
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 395-559
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 9

Conread position: 399-567
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 61

Conread position: 404-542
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 418-545
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 419-559
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 15

Show alignments to all cow chromosomes.