Cow genome map

Conread name: Ss1.1-Pig2-126N08.5

Conread position: 92-972
Cow position: chr1:14085703-14084822 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 852, 0

Conread position: 189-972
Cow position: chr1:80129651-80130438 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 666, 0

Conread position: 667-972
Cow position: chr1:40766265-40766574 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 204, 0

Conread position: 749-972
Cow position: chr1:475474-475701 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 788-972
Cow position: chr1:17450792-17450605 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 55

Conread position: 803-972
Cow position: chr1:65390211-65390384 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 805-971
Cow position: chr1:42053933-42053762 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 805-972
Cow position: chr1:70053068-70053239 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 0

Conread position: 806-964
Cow position: chr1:89484751-89484914 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 806-969
Cow position: chr1:81779321-81779490 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 806-970
Cow position: chr1:4218713-4218545 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 806-970
Cow position: chr1:57362680-57362512 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 806-970
Cow position: chr1:57660250-57660418 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 157

Conread position: 806-971
Cow position: chr1:81859821-81859652 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 806-971
Cow position: chr1:85361252-85361415 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 806-972
Cow position: chr1:7686245-7686075 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 806-972
Cow position: chr1:7712427-7712596 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 42

Conread position: 806-972
Cow position: chr1:16116746-16116576 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 806-972
Cow position: chr1:27462415-27462585 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 93

Conread position: 806-972
Cow position: chr1:30033942-30034113 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 806-972
Cow position: chr1:30372543-30372714 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 806-972
Cow position: chr1:30531381-30531211 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 94

Conread position: 806-972
Cow position: chr1:39100430-39100601 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 806-972
Cow position: chr1:52564387-52564216 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 806-972
Cow position: chr1:55135155-55135325 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 806-972
Cow position: chr1:62711537-62711367 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 806-972
Cow position: chr1:63602135-63601965 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 806-972
Cow position: chr1:99571941-99571772 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 806-972
Cow position: chr1:101008208-101008041 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 98

Conread position: 806-972
Cow position: chr1:101983736-101983566 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 809-970
Cow position: chr1:85358538-85358698 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 45

Conread position: 812-972
Cow position: chr1:20832540-20832702 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 145

Conread position: 817-971
Cow position: chr1:19883954-19883797 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 819-971
Cow position: chr1:50670482-50670636 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 10

Conread position: 819-972
Cow position: chr1:6045920-6046076 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 820-972
Cow position: chr1:39686936-39687089 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 9

Conread position: 823-972
Cow position: chr1:43225317-43225166 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 6

Conread position: 823-972
Cow position: chr1:47418115-47418268 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 824-972
Cow position: chr1:44164489-44164638 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 96

Conread position: 824-972
Cow position: chr1:60033191-60033040 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 825-971
Cow position: chr1:102321453-102321303 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 826-972
Cow position: chr1:25856074-25856225 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 826-972
Cow position: chr1:53494866-53495017 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 826-972
Cow position: chr1:97231394-97231543 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 827-952
Cow position: chr1:57678708-57678580 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 70

Conread position: 827-972
Cow position: chr1:25553477-25553625 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 827-972
Cow position: chr1:40531903-40531757 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 31

Conread position: 827-972
Cow position: chr1:52507948-52507799 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 827-972
Cow position: chr1:66242390-66242243 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 827-972
Cow position: chr1:67821800-67821655 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 828-925
Cow position: chr1:77703593-77703693 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 828-926
Cow position: chr1:3930664-3930564 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 60

Conread position: 828-926
Cow position: chr1:34400914-34401015 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 828-934
Cow position: chr1:37661156-37661264 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 30

Conread position: 828-940
Cow position: chr1:18774677-18774562 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 828-943
Cow position: chr1:58172565-58172683 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 828-945
Cow position: chr1:12035440-12035560 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-945
Cow position: chr1:53328368-53328248 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 828-947
Cow position: chr1:7746617-7746739 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 828-947
Cow position: chr1:7750791-7750913 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 828-951
Cow position: chr1:82568084-82568210 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 828-951
Cow position: chr1:86544467-86544341 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-952
Cow position: chr1:79917010-79916883 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 828-954
Cow position: chr1:55780544-55780673 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-955
Cow position: chr1:6765220-6765088 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 828-955
Cow position: chr1:61725957-61725833 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 30

Conread position: 828-956
Cow position: chr1:37242780-37242911 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-956
Cow position: chr1:57573920-57573791 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 31

Conread position: 828-957
Cow position: chr1:28067519-28067650 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 76

Conread position: 828-957
Cow position: chr1:52038993-52039125 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 828-957
Cow position: chr1:61283095-61283227 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 828-963
Cow position: chr1:26811399-26811261 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:4563388-4563249 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:33392691-33392830 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 64

Conread position: 828-964
Cow position: chr1:53424603-53424741 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 85

Conread position: 828-964
Cow position: chr1:54295247-54295108 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:57636288-57636427 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:68282213-68282351 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 69

Conread position: 828-964
Cow position: chr1:80564401-80564262 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:82992476-82992615 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:85412958-85413097 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-964
Cow position: chr1:90235535-90235396 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 828-964
Cow position: chr1:96193477-96193345 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 828-966
Cow position: chr1:30882985-30882844 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 828-966
Cow position: chr1:71332408-71332267 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 828-966
Cow position: chr1:97761035-97761174 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 828-967
Cow position: chr1:42505963-42505821 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 828-969
Cow position: chr1:43821811-43821955 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-969
Cow position: chr1:50931889-50931746 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 828-969
Cow position: chr1:53613790-53613647 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 59

Conread position: 828-969
Cow position: chr1:54733024-54732881 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 78

Conread position: 828-969
Cow position: chr1:61721944-61721803 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 828-969
Cow position: chr1:82162516-82162372 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-969
Cow position: chr1:88677144-88677288 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-969
Cow position: chr1:89834522-89834664 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 122
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 828-970
Cow position: chr1:2744775-2744919 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 828-970
Cow position: chr1:2764805-2764950 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 828-970
Cow position: chr1:3137116-3137262 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:3382239-3382094 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:3969610-3969465 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:4238998-4239142 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 124

Conread position: 828-970
Cow position: chr1:6795536-6795389 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 828-970
Cow position: chr1:11770885-11770740 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:12596494-12596349 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 828-970
Cow position: chr1:15148968-15148823 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 828-970
Cow position: chr1:18224464-18224319 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 828-970
Cow position: chr1:18962072-18961928 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 21

Conread position: 828-970
Cow position: chr1:21577228-21577373 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:23659042-23659187 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:24446310-24446164 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 828-970
Cow position: chr1:26935104-26934962 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 63

Conread position: 828-970
Cow position: chr1:28677721-28677864 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 119

Conread position: 828-970
Cow position: chr1:38278742-38278596 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:48810557-48810412 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:52354998-52354853 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:52381120-52381265 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:52391187-52391042 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:53578731-53578874 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 828-970
Cow position: chr1:55043588-55043443 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 69

Conread position: 828-970
Cow position: chr1:58439621-58439476 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 828-970
Cow position: chr1:61331287-61331142 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:61724602-61724459 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 828-970
Cow position: chr1:62597547-62597402 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:67192615-67192469 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 828-970
Cow position: chr1:67290289-67290432 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 30

Conread position: 828-970
Cow position: chr1:68481011-68480867 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 29

Conread position: 828-970
Cow position: chr1:68854607-68854752 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 58

Conread position: 828-970
Cow position: chr1:72140449-72140586 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 828-970
Cow position: chr1:78795325-78795181 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 98

Conread position: 828-970
Cow position: chr1:85142539-85142393 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 828-970
Cow position: chr1:85529748-85529605 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 828-970
Cow position: chr1:86511578-86511723 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 828-970
Cow position: chr1:93526828-93526971 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 828-970
Cow position: chr1:96135927-96136063 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 38

Conread position: 828-970
Cow position: chr1:97075827-97075682 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-970
Cow position: chr1:100887831-100887686 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 42

Conread position: 828-971
Cow position: chr1:2070412-2070266 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:4619703-4619849 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:11198940-11198794 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:16838993-16839138 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 141

Conread position: 828-971
Cow position: chr1:17187564-17187418 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:18024144-18024004 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 95

Conread position: 828-971
Cow position: chr1:19235821-19235675 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:20527835-20527981 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 80

Conread position: 828-971
Cow position: chr1:20846337-20846191 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:22296018-22295872 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 828-971
Cow position: chr1:22388822-22388676 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 828-971
Cow position: chr1:22616236-22616090 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 141

Conread position: 828-971
Cow position: chr1:27146243-27146099 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 828-971
Cow position: chr1:29038216-29038362 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 828-971
Cow position: chr1:32562863-32562717 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 828-971
Cow position: chr1:40603700-40603847 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:40681054-40680908 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:44154690-44154834 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 828-971
Cow position: chr1:47072673-47072819 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:50657102-50656956 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 828-971
Cow position: chr1:54116914-54117048 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 828-971
Cow position: chr1:54933603-54933748 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 134

Conread position: 828-971
Cow position: chr1:55203223-55203080 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 84

Conread position: 828-971
Cow position: chr1:56425588-56425734 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:60342650-60342796 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:61006143-61005997 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:63049241-63049387 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 828-971
Cow position: chr1:65943544-65943398 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 828-971
Cow position: chr1:66368717-66368572 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 104

Conread position: 828-971
Cow position: chr1:68275838-68275985 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 828-971
Cow position: chr1:70852695-70852836 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 118

Conread position: 828-971
Cow position: chr1:72306682-72306541 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 121

Conread position: 828-971
Cow position: chr1:74283648-74283502 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:76873553-76873699 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:77657211-77657357 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 828-971
Cow position: chr1:83170118-83170263 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 80

Conread position: 828-971
Cow position: chr1:86599335-86599189 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:86613963-86614110 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 828-971
Cow position: chr1:89185789-89185642 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:91052226-91052083 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 828-971
Cow position: chr1:92009282-92009428 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 828-971
Cow position: chr1:95050732-95050586 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-971
Cow position: chr1:96298601-96298457 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 828-971
Cow position: chr1:97535591-97535737 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 124

Conread position: 828-971
Cow position: chr1:101973536-101973391 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 100

Conread position: 828-972
Cow position: chr1:427657-427512 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 26, 109

Conread position: 828-972
Cow position: chr1:1051731-1051877 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 98

Conread position: 828-972
Cow position: chr1:1383197-1383050 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:1404033-1403887 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 828-972
Cow position: chr1:2990159-2990306 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:3340340-3340484 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 122
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 828-972
Cow position: chr1:3440638-3440785 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:3931964-3931817 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:4337433-4337580 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:4452411-4452264 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 828-972
Cow position: chr1:6165652-6165800 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 828-972
Cow position: chr1:6196604-6196457 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:6657415-6657270 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 69

Conread position: 828-972
Cow position: chr1:6900822-6900969 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:7324713-7324860 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:8345731-8345584 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:8470487-8470340 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:8517394-8517248 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 76

Conread position: 828-972
Cow position: chr1:8602300-8602155 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 25

Conread position: 828-972
Cow position: chr1:8642928-8643075 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:9309166-9309313 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:9526242-9526388 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 25

Conread position: 828-972
Cow position: chr1:10726299-10726446 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:11854280-11854128 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 828-972
Cow position: chr1:12057578-12057432 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 121

Conread position: 828-972
Cow position: chr1:12374628-12374481 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:12465354-12465209 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 83

Conread position: 828-972
Cow position: chr1:12608075-12607928 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:12871608-12871461 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 30

Conread position: 828-972
Cow position: chr1:13250871-13250725 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 25

Conread position: 828-972
Cow position: chr1:13404709-13404562 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:14240391-14240245 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 69

Conread position: 828-972
Cow position: chr1:15418160-15418013 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:15743493-15743640 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:16820282-16820429 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:17247987-17247840 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:18196271-18196418 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:18415135-18414989 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 68

Conread position: 828-972
Cow position: chr1:18699106-18699253 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:19053223-19053371 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:19056544-19056691 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:19157781-19157634 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:19517757-19517610 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:19776200-19776347 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:19828319-19828172 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:20848855-20848708 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:21079764-21079617 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:21376887-21376740 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:21420982-21420835 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:21678568-21678714 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 73

Conread position: 828-972
Cow position: chr1:21994206-21994059 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:22629212-22629071 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:23099305-23099449 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 828-972
Cow position: chr1:23886618-23886471 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:23919940-23920087 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:24909905-24909758 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 97

Conread position: 828-972
Cow position: chr1:26536510-26536363 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:26585897-26586044 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:26588626-26588771 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 28

Conread position: 828-972
Cow position: chr1:26721653-26721505 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:28012970-28012823 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:28413164-28413022 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 67

Conread position: 828-972
Cow position: chr1:28714711-28714858 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:28811566-28811419 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:28876773-28876918 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 828-972
Cow position: chr1:29429280-29429427 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:30312105-30312250 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 828-972
Cow position: chr1:30495230-30495376 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 110

Conread position: 828-972
Cow position: chr1:31351095-31350948 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:31535527-31535674 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:31645953-31645806 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:31708283-31708428 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 828-972
Cow position: chr1:32795855-32796002 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:33040494-33040641 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:33547724-33547577 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:33716636-33716783 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 70

Conread position: 828-972
Cow position: chr1:33854942-33855089 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:34820606-34820753 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:34874651-34874798 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:35147865-35147718 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:36645776-36645629 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:37110401-37110254 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:37726916-37726769 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:38712389-38712536 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:39112381-39112528 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:39234831-39234684 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:40089042-40089189 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:40121916-40122063 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:40351531-40351678 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:40689124-40689270 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 29

Conread position: 828-972
Cow position: chr1:41696476-41696623 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:42174989-42175136 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:42714165-42714018 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:42887827-42887683 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 828-972
Cow position: chr1:44556989-44556842 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:44819129-44818982 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:46122210-46122063 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:46885506-46885654 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:46930278-46930131 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:47078506-47078359 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:47454305-47454159 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 828-972
Cow position: chr1:47543310-47543164 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 64

Conread position: 828-972
Cow position: chr1:47653894-47653747 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:47923192-47923045 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:48345844-48345991 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:48600788-48600934 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 124

Conread position: 828-972
Cow position: chr1:48735610-48735757 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:49132562-49132415 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 828-972
Cow position: chr1:49268556-49268703 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:50687399-50687546 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:50764808-50764955 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:51980647-51980788 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 828-972
Cow position: chr1:52054500-52054647 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 828-972
Cow position: chr1:52068188-52068336 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:52171170-52171022 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 119

Conread position: 828-972
Cow position: chr1:52371829-52371976 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:52378648-52378795 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:52434697-52434845 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:52753760-52753613 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:52754859-52754712 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:53397399-53397546 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 80

Conread position: 828-972
Cow position: chr1:53564115-53564262 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:54471738-54471591 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:54477477-54477624 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:55273368-55273220 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:55429565-55429421 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 90

Conread position: 828-972
Cow position: chr1:56190743-56190596 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:56205138-56204991 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:56620119-56619972 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:56644213-56644074 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 25

Conread position: 828-972
Cow position: chr1:56666776-56666923 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:57120158-57120013 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 116

Conread position: 828-972
Cow position: chr1:57421716-57421570 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 828-972
Cow position: chr1:57571508-57571655 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:57577225-57577077 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:59483191-59483044 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 828-972
Cow position: chr1:59626333-59626480 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:60114445-60114592 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:61070435-61070575 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 68

Conread position: 828-972
Cow position: chr1:61493475-61493622 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:62507569-62507422 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:62530108-62529961 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:62928522-62928669 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:62967367-62967220 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:63046557-63046704 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:63240380-63240527 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 828-972
Cow position: chr1:63340797-63340650 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:64251653-64251505 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:64613382-64613529 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:65480628-65480775 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:66145376-66145523 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:66491253-66491400 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:66971496-66971349 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:67188749-67188602 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:67717657-67717510 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:67831459-67831311 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:68145295-68145148 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:68601954-68601807 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:69406834-69406990 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:69503698-69503551 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:69513754-69513607 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:69872828-69872681 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:69963634-69963487 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:70068735-70068588 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:70380737-70380592 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 86

Conread position: 828-972
Cow position: chr1:70532759-70532906 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:70864919-70865066 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 828-972
Cow position: chr1:70897419-70897566 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:71123963-71123816 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:71559074-71558927 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:72087260-72087406 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 71

Conread position: 828-972
Cow position: chr1:72104564-72104709 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 130

Conread position: 828-972
Cow position: chr1:72589688-72589541 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:72806342-72806195 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:72808255-72808402 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:72812831-72812978 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:72963419-72963272 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:72987131-72987278 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:73702656-73702517 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 828-972
Cow position: chr1:73761875-73761729 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 12

Conread position: 828-972
Cow position: chr1:74513467-74513320 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:75403570-75403718 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:75743940-75744085 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 23

Conread position: 828-972
Cow position: chr1:76207839-76207692 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:76486131-76485984 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:76617804-76617666 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 828-972
Cow position: chr1:76700065-76699919 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 54

Conread position: 828-972
Cow position: chr1:76851332-76851187 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:77461806-77461953 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 828-972
Cow position: chr1:77554327-77554180 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:77619961-77620108 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:77748418-77748565 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:78235011-78234864 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:78291233-78291380 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:78558103-78558250 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:78921333-78921186 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:79554171-79554317 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 29

Conread position: 828-972
Cow position: chr1:79590513-79590660 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:79632879-79632732 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:80062967-80063114 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:81913835-81913689 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 79

Conread position: 828-972
Cow position: chr1:82479659-82479806 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:82482444-82482298 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 69

Conread position: 828-972
Cow position: chr1:82920465-82920318 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:83059966-83059819 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:84284379-84284526 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:84786410-84786263 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:84894238-84894385 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:85163417-85163270 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 85

Conread position: 828-972
Cow position: chr1:85578182-85578035 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:85773881-85774026 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 20

Conread position: 828-972
Cow position: chr1:85776786-85776639 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 828-972
Cow position: chr1:85795624-85795770 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:85866484-85866631 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 23

Conread position: 828-972
Cow position: chr1:86372362-86372215 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:86496965-86497112 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:86597227-86597374 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:87564925-87565072 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:88179536-88179681 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 24

Conread position: 828-972
Cow position: chr1:88297885-88298032 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:88327808-88327661 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 70

Conread position: 828-972
Cow position: chr1:89234357-89234210 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:89432079-89432226 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 828-972
Cow position: chr1:89792880-89792733 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:90605165-90605021 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 42

Conread position: 828-972
Cow position: chr1:90836985-90836840 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 19

Conread position: 828-972
Cow position: chr1:91673907-91674054 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:92196649-92196796 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:92370951-92370799 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 828-972
Cow position: chr1:92962801-92962946 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 14

Conread position: 828-972
Cow position: chr1:94663329-94663475 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 119

Conread position: 828-972
Cow position: chr1:94879405-94879260 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 56

Conread position: 828-972
Cow position: chr1:95071120-95071268 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 828-972
Cow position: chr1:95593050-95592903 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:97311764-97311908 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 828-972
Cow position: chr1:97622794-97622646 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:98361277-98361131 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 100

Conread position: 828-972
Cow position: chr1:98559588-98559735 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 828-972
Cow position: chr1:99100741-99100594 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:99105473-99105326 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:99224327-99224190 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 828-972
Cow position: chr1:100421260-100421407 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 828-972
Cow position: chr1:100436323-100436468 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 828-972
Cow position: chr1:100450776-100450629 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 828-972
Cow position: chr1:101792671-101792526 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 828-972
Cow position: chr1:102743555-102743696 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 828-972
Cow position: chr1:102815149-102815295 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 74

Conread position: 829-959
Cow position: chr1:82880101-82880234 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 829-970
Cow position: chr1:42554672-42554816 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 829-970
Cow position: chr1:44991299-44991152 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 33

Conread position: 829-971
Cow position: chr1:82338396-82338253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 24

Conread position: 829-972
Cow position: chr1:5771281-5771137 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 12

Conread position: 829-972
Cow position: chr1:10034204-10034348 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 829-972
Cow position: chr1:11665864-11665718 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 829-972
Cow position: chr1:17938076-17937930 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 829-972
Cow position: chr1:22012286-22012142 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 23

Conread position: 829-972
Cow position: chr1:61221096-61221241 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 829-972
Cow position: chr1:72766359-72766213 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 829-972
Cow position: chr1:95474233-95474087 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 830-943
Cow position: chr1:2219558-2219442 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 830-945
Cow position: chr1:37887333-37887215 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 830-946
Cow position: chr1:55158704-55158585 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 830-955
Cow position: chr1:15333332-15333458 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 68

Conread position: 830-964
Cow position: chr1:81356616-81356479 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 830-969
Cow position: chr1:34397384-34397240 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 830-970
Cow position: chr1:9262174-9262318 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 830-970
Cow position: chr1:12215076-12214933 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 830-970
Cow position: chr1:19793589-19793733 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 830-970
Cow position: chr1:20798499-20798642 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 830-970
Cow position: chr1:22728465-22728609 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 830-970
Cow position: chr1:46694239-46694096 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 830-970
Cow position: chr1:100759501-100759644 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 830-971
Cow position: chr1:11914452-11914310 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 122

Conread position: 830-971
Cow position: chr1:33081645-33081502 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 67

Conread position: 830-971
Cow position: chr1:59019191-59019335 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 12

Conread position: 830-971
Cow position: chr1:63454497-63454353 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 830-971
Cow position: chr1:93040562-93040417 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 127

Conread position: 830-972
Cow position: chr1:1349146-1349001 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 830-972
Cow position: chr1:24562076-24561933 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 68

Conread position: 830-972
Cow position: chr1:24571462-24571318 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 69

Conread position: 830-972
Cow position: chr1:29915830-29915975 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 830-972
Cow position: chr1:31646751-31646606 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 830-972
Cow position: chr1:33987129-33986984 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 830-972
Cow position: chr1:47791394-47791253 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 23

Conread position: 830-972
Cow position: chr1:52979343-52979488 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 830-972
Cow position: chr1:55145957-55146102 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 830-972
Cow position: chr1:64941874-64941725 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 830-972
Cow position: chr1:71691231-71691376 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 830-972
Cow position: chr1:76020263-76020117 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 830-972
Cow position: chr1:79334306-79334163 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 11

Conread position: 830-972
Cow position: chr1:90913506-90913650 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 62

Conread position: 830-972
Cow position: chr1:95765708-95765570 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 830-972
Cow position: chr1:99837669-99837524 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 831-955
Cow position: chr1:78586779-78586652 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 831-964
Cow position: chr1:40058772-40058908 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 831-964
Cow position: chr1:63260817-63260684 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 831-969
Cow position: chr1:53594475-53594616 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 831-970
Cow position: chr1:9376700-9376558 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 831-970
Cow position: chr1:56720822-56720680 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 831-970
Cow position: chr1:85782099-85781960 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 831-971
Cow position: chr1:17435723-17435580 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 831-971
Cow position: chr1:30281147-30281004 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 831-971
Cow position: chr1:46612618-46612475 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 831-971
Cow position: chr1:76878709-76878852 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:8744818-8744674 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 831-972
Cow position: chr1:10624370-10624514 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 831-972
Cow position: chr1:12746236-12746092 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:21300428-21300572 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:22483924-22483780 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:29129087-29129230 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 101

Conread position: 831-972
Cow position: chr1:31638833-31638689 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:32960528-32960383 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:33900218-33900362 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:34533920-34534064 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:35598132-35597988 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 831-972
Cow position: chr1:49773301-49773157 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:51884280-51884424 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:55292964-55292820 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:61281689-61281833 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:68097477-68097333 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:71795211-71795355 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:72624529-72624673 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:76631704-76631848 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:83136614-83136757 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 22

Conread position: 831-972
Cow position: chr1:84449304-84449448 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:89089858-89089714 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:91902698-91902842 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:93111237-93111094 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 87

Conread position: 831-972
Cow position: chr1:95344722-95344867 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:95457030-95457174 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:97206034-97206178 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 831-972
Cow position: chr1:98353716-98353572 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 832-970
Cow position: chr1:31238504-31238363 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 832-971
Cow position: chr1:74939622-74939765 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 832-971
Cow position: chr1:82861206-82861347 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 65

Conread position: 832-971
Cow position: chr1:85865217-85865359 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 832-972
Cow position: chr1:27494916-27495060 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 832-972
Cow position: chr1:28770224-28770081 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 832-972
Cow position: chr1:42874523-42874380 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 135

Conread position: 832-972
Cow position: chr1:73756514-73756654 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 65

Conread position: 832-972
Cow position: chr1:76419535-76419678 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 832-972
Cow position: chr1:89492561-89492418 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 832-972
Cow position: chr1:91105718-91105861 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 833-970
Cow position: chr1:53312830-53312970 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 833-972
Cow position: chr1:53650334-53650469 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 833-972
Cow position: chr1:61563728-61563870 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 833-972
Cow position: chr1:96963747-96963890 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 835-972
Cow position: chr1:3062308-3062168 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 835-972
Cow position: chr1:12283040-12283180 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 836-972
Cow position: chr1:68799004-68798863 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 837-972
Cow position: chr1:3930435-3930297 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 838-928
Cow position: chr1:37563082-37562989 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-946
Cow position: chr1:5505624-5505735 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-955
Cow position: chr1:68717772-68717657 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 838-956
Cow position: chr1:43972898-43973019 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-960
Cow position: chr1:7739411-7739536 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-961
Cow position: chr1:21835210-21835336 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 838-962
Cow position: chr1:63906067-63905939 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 838-963
Cow position: chr1:16337420-16337292 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-964
Cow position: chr1:26606789-26606660 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-964
Cow position: chr1:57759595-57759724 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 838-964
Cow position: chr1:83576464-83576334 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 838-968
Cow position: chr1:98988741-98988607 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 838-969
Cow position: chr1:6335037-6334904 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 838-969
Cow position: chr1:10790526-10790661 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 838-969
Cow position: chr1:13438978-13439112 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 838-969
Cow position: chr1:55586179-55586045 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 838-969
Cow position: chr1:67916283-67916417 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 838-970
Cow position: chr1:10071422-10071287 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 838-970
Cow position: chr1:16797417-16797283 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 838-970
Cow position: chr1:17032909-17032777 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 15

Conread position: 838-970
Cow position: chr1:22630045-22630180 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 838-970
Cow position: chr1:33910050-33910185 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 838-970
Cow position: chr1:44095029-44094894 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 838-970
Cow position: chr1:56411727-56411861 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 20

Conread position: 838-970
Cow position: chr1:69941539-69941403 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-970
Cow position: chr1:89084093-89084229 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 838-970
Cow position: chr1:100510260-100510393 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 109

Conread position: 838-971
Cow position: chr1:20543908-20544044 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 65

Conread position: 838-971
Cow position: chr1:21257924-21257790 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 73

Conread position: 838-971
Cow position: chr1:24236091-24235955 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 838-971
Cow position: chr1:29901569-29901432 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 838-971
Cow position: chr1:42316941-42316807 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 65

Conread position: 838-971
Cow position: chr1:43650219-43650091 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 33

Conread position: 838-971
Cow position: chr1:53520332-53520463 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 114

Conread position: 838-971
Cow position: chr1:58384935-58385067 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 838-971
Cow position: chr1:67078141-67078005 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 838-971
Cow position: chr1:79843895-79844030 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 118
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 114

Conread position: 838-971
Cow position: chr1:81362959-81363093 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 71

Conread position: 838-972
Cow position: chr1:831556-831419 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:1023382-1023245 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:1028053-1028190 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:1877472-1877610 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 106

Conread position: 838-972
Cow position: chr1:3908974-3908838 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 19

Conread position: 838-972
Cow position: chr1:4515050-4514913 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:4645872-4645735 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:7197026-7197163 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:13451474-13451611 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:15463782-15463919 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 838-972
Cow position: chr1:21092518-21092654 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 54

Conread position: 838-972
Cow position: chr1:21506861-21506724 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:21786741-21786880 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 838-972
Cow position: chr1:22546498-22546635 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:23117523-23117387 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 20

Conread position: 838-972
Cow position: chr1:23370878-23370742 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 105

Conread position: 838-972
Cow position: chr1:23634474-23634333 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 838-972
Cow position: chr1:24440375-24440237 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:27956660-27956794 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 64

Conread position: 838-972
Cow position: chr1:33464586-33464449 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:35071008-35071144 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 838-972
Cow position: chr1:37244017-37243880 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:38418500-38418636 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 59

Conread position: 838-972
Cow position: chr1:40648240-40648375 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 15

Conread position: 838-972
Cow position: chr1:43353224-43353087 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:53208276-53208137 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:53458133-53458268 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 121
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 64, 15

Conread position: 838-972
Cow position: chr1:56619260-56619123 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 838-972
Cow position: chr1:56634300-56634434 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 838-972
Cow position: chr1:58192120-58191983 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 838-972
Cow position: chr1:58340600-58340737 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:59201900-59201763 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:61204471-61204608 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:67006560-67006696 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 59

Conread position: 838-972
Cow position: chr1:68253015-68253153 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 76

Conread position: 838-972
Cow position: chr1:68610092-68609955 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:68783227-68783097 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 838-972
Cow position: chr1:71819080-71818944 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 69

Conread position: 838-972
Cow position: chr1:73433445-73433308 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:73463652-73463788 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 33, 69

Conread position: 838-972
Cow position: chr1:77840970-77841107 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:80901805-80901672 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 838-972
Cow position: chr1:81309047-81309184 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:82937159-82937022 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 838-972
Cow position: chr1:84447367-84447504 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:90393073-90392936 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 838-972
Cow position: chr1:93858198-93858335 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 838-972
Cow position: chr1:98612633-98612770 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 838-972
Cow position: chr1:101776104-101776237 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 62

Conread position: 838-972
Cow position: chr1:102010592-102010456 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 63

Conread position: 839-951
Cow position: chr1:72035763-72035648 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 839-966
Cow position: chr1:85028389-85028518 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 120

Conread position: 839-970
Cow position: chr1:12677904-12678035 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 119

Conread position: 839-970
Cow position: chr1:38423122-38423256 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 12

Conread position: 839-970
Cow position: chr1:39913588-39913455 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 53

Conread position: 839-970
Cow position: chr1:69534610-69534743 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 105

Conread position: 839-971
Cow position: chr1:62140973-62140839 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 42

Conread position: 839-971
Cow position: chr1:95500073-95499940 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 61

Conread position: 839-972
Cow position: chr1:7162132-7161996 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 839-972
Cow position: chr1:8659074-8659210 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 839-972
Cow position: chr1:8828707-8828843 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 839-972
Cow position: chr1:8845304-8845440 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 839-972
Cow position: chr1:26702771-26702635 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 839-972
Cow position: chr1:80184313-80184178 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 119

Conread position: 839-972
Cow position: chr1:91799550-91799423 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 840-964
Cow position: chr1:41736182-41736059 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 840-964
Cow position: chr1:100591086-100590959 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 840-970
Cow position: chr1:29606355-29606226 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 840-971
Cow position: chr1:57854923-57854787 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 840-971
Cow position: chr1:94464796-94464933 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 840-972
Cow position: chr1:40436482-40436617 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 840-972
Cow position: chr1:46821437-46821572 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 840-972
Cow position: chr1:53373874-53374011 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 840-972
Cow position: chr1:69770503-69770638 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 840-972
Cow position: chr1:74086123-74085991 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 103

Conread position: 840-972
Cow position: chr1:76748707-76748572 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 840-972
Cow position: chr1:88028500-88028635 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 62

Conread position: 840-972
Cow position: chr1:96184578-96184445 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 841-964
Cow position: chr1:63042169-63042045 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 44

Conread position: 841-972
Cow position: chr1:25178314-25178182 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 8

Conread position: 841-972
Cow position: chr1:30066067-30066193 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 841-972
Cow position: chr1:91888559-91888425 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 842-972
Cow position: chr1:53308969-53308835 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 843-966
Cow position: chr1:25119600-25119476 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 843-970
Cow position: chr1:86578420-86578551 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 843-972
Cow position: chr1:40061875-40062008 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 845-964
Cow position: chr1:73468911-73469035 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 845-970
Cow position: chr1:40292460-40292334 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 847-972
Cow position: chr1:31715016-31714888 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 847-972
Cow position: chr1:55137804-55137676 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 848-970
Cow position: chr1:99792224-99792349 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 848-972
Cow position: chr1:56140700-56140573 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 848-972
Cow position: chr1:100537076-100537203 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 849-969
Cow position: chr1:17652981-17653101 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 849-970
Cow position: chr1:73995127-73995251 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 849-971
Cow position: chr1:39069535-39069410 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 849-972
Cow position: chr1:7867469-7867595 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 849-972
Cow position: chr1:39160975-39160849 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 849-972
Cow position: chr1:52941702-52941828 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 849-972
Cow position: chr1:57272273-57272399 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 849-972
Cow position: chr1:68821428-68821302 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 849-972
Cow position: chr1:101834070-101834195 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 90

Conread position: 850-972
Cow position: chr1:39890054-39890178 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 62

Conread position: 850-972
Cow position: chr1:57087810-57087685 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 851-971
Cow position: chr1:32768223-32768101 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 69

Conread position: 852-970
Cow position: chr1:89344352-89344471 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 8

Conread position: 852-972
Cow position: chr1:7416178-7416301 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 852-972
Cow position: chr1:61747720-61747597 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 852-972
Cow position: chr1:72462577-72462700 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 853-963
Cow position: chr1:33657464-33657577 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 853-970
Cow position: chr1:20002813-20002696 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 853-970
Cow position: chr1:54199939-54199819 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 853-971
Cow position: chr1:45006908-45007028 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 115

Conread position: 853-971
Cow position: chr1:65659235-65659353 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 853-972
Cow position: chr1:9593714-9593592 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 853-972
Cow position: chr1:13150243-13150365 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 853-972
Cow position: chr1:22480800-22480681 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 853-972
Cow position: chr1:32108526-32108645 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 853-972
Cow position: chr1:33365631-33365753 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 853-972
Cow position: chr1:53369413-53369535 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 853-972
Cow position: chr1:68846013-68845893 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 853-972
Cow position: chr1:77553492-77553370 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 853-972
Cow position: chr1:99912567-99912445 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 854-972
Cow position: chr1:15386218-15386096 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 854-972
Cow position: chr1:24581085-24581203 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 854-972
Cow position: chr1:37310075-37309954 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 854-972
Cow position: chr1:68951086-68951205 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 31

Conread position: 855-971
Cow position: chr1:34857747-34857628 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 856-972
Cow position: chr1:12086951-12087070 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 856-972
Cow position: chr1:81168697-81168578 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 861-969
Cow position: chr1:20866885-20866777 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 861-972
Cow position: chr1:25055351-25055240 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 863-971
Cow position: chr1:51376489-51376382 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 863-971
Cow position: chr1:57640048-57639940 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 87

Conread position: 864-963
Cow position: chr1:92277186-92277087 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 864-969
Cow position: chr1:39249513-39249408 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 864-970
Cow position: chr1:90297616-90297721 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 864-971
Cow position: chr1:38382426-38382319 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 864-971
Cow position: chr1:81925480-81925376 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 864-972
Cow position: chr1:13298249-13298357 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 864-972
Cow position: chr1:31405466-31405574 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 864-972
Cow position: chr1:43448320-43448212 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 864-972
Cow position: chr1:54639740-54639848 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 864-972
Cow position: chr1:77100443-77100336 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 7

Conread position: 864-972
Cow position: chr1:79426520-79426412 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 864-972
Cow position: chr1:99398331-99398439 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 866-969
Cow position: chr1:31544466-31544569 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 866-971
Cow position: chr1:98073681-98073786 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 867-971
Cow position: chr1:55706007-55705903 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 867-972
Cow position: chr1:9578194-9578299 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 867-972
Cow position: chr1:51365824-51365929 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 870-971
Cow position: chr1:54207362-54207261 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 870-972
Cow position: chr1:18535199-18535097 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 870-972
Cow position: chr1:27309339-27309237 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 871-972
Cow position: chr1:97251273-97251172 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 872-972
Cow position: chr1:90622035-90621935 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 875-972
Cow position: chr1:44126831-44126735 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 876-971
Cow position: chr1:3739466-3739561 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.