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Cow genome map

           
Conread name:
           
Ss1.1-Pig2-24P19.5.5
        

               
Conread position:
               
1-100
               

               
Cow position:
               
chr18:44802126-44802224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chr18:56191446-56191552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-110
               

               
Cow position:
               
chr18:56181697-56181806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr18:18627569-18627686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr18:9846676-9846793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr18:46880925-46881043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr18:33896878-33896997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr18:47314536-47314662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr18:48407547-48407426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr18:48818490-48818625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr18:49660281-49660413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr18:29768671-29768539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr18:6881580-6881705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr18:14815577-14815711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr18:20174372-20174506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:9818594-9818463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:11831896-11831766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:18819908-18820036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:2864450-2864584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:3027607-3027743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:4556627-4556763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:11311391-11311524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:11618236-11618104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:12270252-12270114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:12679748-12679612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 89
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:12776015-12776151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:16180181-16180046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:18340199-18340331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:19977222-19977356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:26843890-26844024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:32244257-32244400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:36458692-36458556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:39662543-39662399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:47511753-47511616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:50993512-50993651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:51178988-51179122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:55461949-55462087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:55505158-55505026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:55697258-55697393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:3098556-3098692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:4624672-4624808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:7487010-7486873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:7947133-7946996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:11671567-11671431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:14586719-14586855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:16417939-16418072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:19645933-19645799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:21195580-21195718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:30186148-30186288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:35295321-35295183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:55692579-55692443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr18:6290542-6290401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr18:15881099-15881237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr18:30360362-30360505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr18:13876971-13877117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr18:19640556-19640411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 112
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr18:21752061-21751915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr18:39002036-39002183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:4535227-4535372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:7969973-7969827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:10103372-10103224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:19159207-19159351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:20864741-20864598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:20998860-20999002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:52596147-52596008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr18:55552723-55552577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:41270848-41270698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr18:33793466-33793313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr18:29264697-29264840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:25003118-25003270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:54974232-54974383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr18:55015154-55015002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr18:46108620-46108786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr18:45904134-45904297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
155, 108
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr18:56361843-56362005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr18:7322491-7322329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr18:43563985-43563821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr18:6103357-6103513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr18:45570779-45570572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:5189923-5190142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 28
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr18:3158844-3159064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:4950308-4950085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:28768124-28767893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr18:9066476-9066242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:52635325-52635561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 8
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr18:55589717-55589954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
147, 117
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:2608971-2609198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:3180178-3179939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:4926832-4926597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:12118086-12118325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:12585383-12585621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:14048471-14048241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
58, 162
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:19193592-19193827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:19849993-19850226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:26938741-26938505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:37023799-37024037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:47183526-47183765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 203
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr18:9974568-9974807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr18:1733434-1733651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:4316065-4315819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:16378729-16378484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr18:30248370-30248603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:81514-81278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:2270746-2270990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:4496426-4496666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:4673082-4672856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:6877872-6878114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:7359492-7359274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:7964989-7964744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:9007907-9007661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:10656203-10655970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:16148100-16148328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:19115691-19115945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:22275278-22275529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:29387984-29387750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:32283630-32283389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:32285149-32284908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:32301294-32301053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:33299655-33299421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:36907415-36907661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:36911941-36912187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:39709648-39709403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:40758973-40758725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:42966596-42966351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:44262380-44262128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:45104689-45104914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:50637705-50637949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 69
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:51756855-51756612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:52899825-52899580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:55119632-55119383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:55782664-55782913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:56150898-56151141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr18:35751896-35752138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:51679115-51679369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
134, 236
               

               
Conread position:
               
2-116
               

               
Cow position:
               
chr18:11213001-11212888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-130
               

               
Cow position:
               
chr18:23429539-23429412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-131
               

               
Cow position:
               
chr18:9010488-9010360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-132
               

               
Cow position:
               
chr18:5487008-5486878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-135
               

               
Cow position:
               
chr18:41072626-41072491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr18:16134551-16134685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr18:35076143-35076009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr18:35535529-35535663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr18:51691711-51691846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr18:51712952-51713087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:7966019-7965892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:13172765-13172904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:20329052-20329187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:21721523-21721659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:22121125-22121259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:29248478-29248614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr18:11377121-11376988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr18:20226385-20226529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr18:23616896-23617036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr18:45168590-45168449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr18:32860404-32860261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr18:27078606-27078403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr18:5457504-5457722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr18:21251743-21251514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr18:34052231-34052444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr18:29058739-29058966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr18:23658802-23659046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr18:33407367-33407151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 26
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr18:33606389-33606144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr18:55768417-55768667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
3-104
               

               
Cow position:
               
chr18:24957052-24956951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-120
               

               
Cow position:
               
chr18:18562782-18562899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-127
               

               
Cow position:
               
chr18:45395757-45395625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
3-136
               

               
Cow position:
               
chr18:21528160-21528028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr18:23630821-23630953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr18:45961504-45961637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr18:24267086-24267221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr18:29484592-29484722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-138
               

               
Cow position:
               
chr18:49161700-49161835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr18:16045244-16045388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr18:32908655-32908515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr18:33272701-33272558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr18:24342381-24342234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-154
               

               
Cow position:
               
chr18:48451432-48451284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr18:35636594-35636818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
137, 67
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr18:29065617-29065841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr18:16227317-16227086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 165
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr18:28101382-28101139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr18:35012550-35012792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
111, 168
               

               
Conread position:
               
4-135
               

               
Cow position:
               
chr18:17005005-17004878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-137
               

               
Cow position:
               
chr18:3416926-3416795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr18:7076518-7076283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
5-137
               

               
Cow position:
               
chr18:13507978-13508104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-137
               

               
Cow position:
               
chr18:38606990-38606858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-138
               

               
Cow position:
               
chr18:90208-90083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
5-141
               

               
Cow position:
               
chr18:49665406-49665539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr18:51190999-51191239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
86, 93
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr18:4796722-4796590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-142
               

               
Cow position:
               
chr18:29371622-29371484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr18:13293262-13293022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr18:43950598-43950353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 206
               

               
Conread position:
               
7-137
               

               
Cow position:
               
chr18:28530349-28530479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr18:1800577-1800724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
8-138
               

               
Cow position:
               
chr18:11322340-11322210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-137
               

               
Cow position:
               
chr18:22569280-22569405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
9-147
               

               
Cow position:
               
chr18:55701896-55702033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
11-120
               

               
Cow position:
               
chr18:51827039-51826930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-230
               

               
Cow position:
               
chr18:4540125-4540359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr18:19761254-19761018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
13-147
               

               
Cow position:
               
chr18:34621617-34621752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
14-124
               

               
Cow position:
               
chr18:48241686-48241577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
14-136
               

               
Cow position:
               
chr18:7930399-7930520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
14-137
               

               
Cow position:
               
chr18:35818255-35818377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
14-138
               

               
Cow position:
               
chr18:4725736-4725860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-138
               

               
Cow position:
               
chr18:22065618-22065740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
14-147
               

               
Cow position:
               
chr18:1662989-1663119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
14-147
               

               
Cow position:
               
chr18:1664218-1664088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
14-147
               

               
Cow position:
               
chr18:4775952-4776084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
14-149
               

               
Cow position:
               
chr18:47777854-47777717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
14-151
               

               
Cow position:
               
chr18:37021671-37021534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr18:7649739-7649505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
15-134
               

               
Cow position:
               
chr18:2849517-2849636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-137
               

               
Cow position:
               
chr18:27799788-27799910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-138
               

               
Cow position:
               
chr18:11577322-11577200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
15-138
               

               
Cow position:
               
chr18:27169153-27169030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-139
               

               
Cow position:
               
chr18:33024974-33024849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
15-147
               

               
Cow position:
               
chr18:16781914-16782046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-147
               

               
Cow position:
               
chr18:31202120-31201988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-147
               

               
Cow position:
               
chr18:34755180-34755312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-147
               

               
Cow position:
               
chr18:51458754-51458886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-154
               

               
Cow position:
               
chr18:1859476-1859617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr18:18075896-18076103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 82
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr18:13977417-13977187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr18:25164788-25165015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr18:37690862-37691083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
16-138
               

               
Cow position:
               
chr18:21810539-21810660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
16-230
               

               
Cow position:
               
chr18:45979447-45979217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
17-127
               

               
Cow position:
               
chr18:31213722-31213832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-130
               

               
Cow position:
               
chr18:35289136-35289023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-130
               

               
Cow position:
               
chr18:43503892-43504005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-133
               

               
Cow position:
               
chr18:19536402-19536285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
17-136
               

               
Cow position:
               
chr18:11270915-11271035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
17-136
               

               
Cow position:
               
chr18:51691068-51691187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-136
               

               
Cow position:
               
chr18:56045915-56045796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-137
               

               
Cow position:
               
chr18:3190832-3190713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
17-137
               

               
Cow position:
               
chr18:24599801-24599920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
17-137
               

               
Cow position:
               
chr18:36632168-36632288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-137
               

               
Cow position:
               
chr18:40141149-40141268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:10574795-10574674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:26822685-26822564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:29072505-29072384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:30385914-30386036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:38157462-38157584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:54657030-54656910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
17-138
               

               
Cow position:
               
chr18:56017365-56017486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:16082574-16082445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:18091679-18091809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:19320720-19320590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:23466541-23466411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:26572896-26573025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:27103062-27102934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:37733780-37733650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:42608586-42608717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:45901864-45901994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:50851584-50851715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:52575192-52575062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:52629169-52629299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-147
               

               
Cow position:
               
chr18:52665217-52665347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-224
               

               
Cow position:
               
chr18:16172529-16172752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr18:27429185-27428962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 49
               

               
Conread position:
               
17-227
               

               
Cow position:
               
chr18:15679077-15678856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
17-227
               

               
Cow position:
               
chr18:31711754-31711949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr18:23700127-23700355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:18214933-18215162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:27530107-27529877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:27990843-27990617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 53
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:28968200-28968429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:33907469-33907698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:36512717-36512487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:42629453-42629224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:43076004-43075777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 153
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:45981583-45981355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
17-230
               

               
Cow position:
               
chr18:51346377-51346148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-108
               

               
Cow position:
               
chr18:26343814-26343724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-110
               

               
Cow position:
               
chr18:40329598-40329506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-112
               

               
Cow position:
               
chr18:40770302-40770208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-117
               

               
Cow position:
               
chr18:46145543-46145444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-120
               

               
Cow position:
               
chr18:22182018-22182120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-123
               

               
Cow position:
               
chr18:31947159-31947264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-124
               

               
Cow position:
               
chr18:33855948-33856054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-131
               

               
Cow position:
               
chr18:31054373-31054486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-135
               

               
Cow position:
               
chr18:19531444-19531327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr18:602378-602496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr18:13270990-13270872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr18:25005841-25005958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr18:34056256-34056374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr18:43393561-43393443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-136
               

               
Cow position:
               
chr18:51666290-51666174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:1611503-1611384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:5186400-5186518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:8316174-8316055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:15911269-15911388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:19531201-19531082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:22396339-22396458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:22591384-22591503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:24590872-24590753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:26568668-26568549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:27554813-27554932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:29648527-29648411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:31309863-31309744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:32019778-32019897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:32755298-32755179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:34814530-34814411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:43226209-43226327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:52243684-52243565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:54365448-54365567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:55022076-55022195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-137
               

               
Cow position:
               
chr18:55547335-55547454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-138
               

               
Cow position:
               
chr18:35364032-35364149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
18-138
               

               
Cow position:
               
chr18:55418070-55417950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-146
               

               
Cow position:
               
chr18:8624243-8624372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-146
               

               
Cow position:
               
chr18:32436380-32436509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
18-146
               

               
Cow position:
               
chr18:45646365-45646492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
18-146
               

               
Cow position:
               
chr18:46581439-46581568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
18-147
               

               
Cow position:
               
chr18:17349742-17349614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
18-147
               

               
Cow position:
               
chr18:23661051-23660922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-147
               

               
Cow position:
               
chr18:29079825-29079696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-147
               

               
Cow position:
               
chr18:43539205-43539076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-149
               

               
Cow position:
               
chr18:35337455-35337324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-161
               

               
Cow position:
               
chr18:26242357-26242501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
18-224
               

               
Cow position:
               
chr18:52656933-52656711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:5185303-5185531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:11251294-11251522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:16857873-16857645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:21738466-21738238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:24547780-24548009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:25958181-25957953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:26485483-26485255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:26883810-26883581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:27798064-27798292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:27995767-27995539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:28086903-28086675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:30677402-30677174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:33616334-33616562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:34050876-34051104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:37314638-37314866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:40059764-40059536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:42421664-42421892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:42425659-42425432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:51579697-51579925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:51601579-51601807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:54033783-54033555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:54071743-54071971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:55436046-55436274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:55555338-55555110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
19-131
               

               
Cow position:
               
chr18:10575852-10575740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-133
               

               
Cow position:
               
chr18:28794326-28794440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-135
               

               
Cow position:
               
chr18:19377945-19378060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
19-136
               

               
Cow position:
               
chr18:4628179-4628296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-137
               

               
Cow position:
               
chr18:215295-215413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-137
               

               
Cow position:
               
chr18:10292815-10292697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-138
               

               
Cow position:
               
chr18:6322479-6322360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-138
               

               
Cow position:
               
chr18:25355602-25355483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-138
               

               
Cow position:
               
chr18:33852595-33852476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-138
               

               
Cow position:
               
chr18:35637900-35637781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-138
               

               
Cow position:
               
chr18:45886500-45886619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-138
               

               
Cow position:
               
chr18:51485675-51485556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-142
               

               
Cow position:
               
chr18:40196198-40196075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-146
               

               
Cow position:
               
chr18:27540509-27540381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:5786778-5786650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:6046743-6046875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:22237215-22237343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:28820097-28820224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:28925372-28925500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:31139836-31139708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:41853183-41853308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
19-147
               

               
Cow position:
               
chr18:44235940-44235810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr18:28539646-28539866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr18:17002401-17002180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr18:27833339-27833560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr18:40252914-40253135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr18:42224074-42223853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:4432812-4432586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 97
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:6665616-6665841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:7050689-7050465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:16094963-16094738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 197
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:19356610-19356383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:23803098-23802880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:23949670-23949897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:29862523-29862749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:41837029-41837256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:43431085-43430858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
19-230
               

               
Cow position:
               
chr18:50114197-50114428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
20-136
               

               
Cow position:
               
chr18:30420725-30420839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
20-142
               

               
Cow position:
               
chr18:26001625-26001746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
20-230
               

               
Cow position:
               
chr18:4323290-4323062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
20-230
               

               
Cow position:
               
chr18:24036765-24036991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
20-230
               

               
Cow position:
               
chr18:43473663-43473446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
21-138
               

               
Cow position:
               
chr18:37510025-37509908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-230
               

               
Cow position:
               
chr18:33609969-33609748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
22-137
               

               
Cow position:
               
chr18:46321532-46321647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-147
               

               
Cow position:
               
chr18:1584472-1584593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
22-209
               

               
Cow position:
               
chr18:51749191-51749387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
22-230
               

               
Cow position:
               
chr18:53829422-53829646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
23-120
               

               
Cow position:
               
chr18:26006195-26006292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-147
               

               
Cow position:
               
chr18:10040218-10040342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-147
               

               
Cow position:
               
chr18:56431092-56431217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr18:27194579-27194374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
23-224
               

               
Cow position:
               
chr18:18990712-18990928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
23-229
               

               
Cow position:
               
chr18:6829326-6829550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
24-114
               

               
Cow position:
               
chr18:2774852-2774942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr18:36524467-36524682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 103
               

               
Conread position:
               
25-137
               

               
Cow position:
               
chr18:26306350-26306238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-230
               

               
Cow position:
               
chr18:25924457-25924236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
32-138
               

               
Cow position:
               
chr18:290983-291088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
32-147
               

               
Cow position:
               
chr18:30406293-30406408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
32-230
               

               
Cow position:
               
chr18:36224508-36224294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
35-132
               

               
Cow position:
               
chr18:18445667-18445762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
37-136
               

               
Cow position:
               
chr18:17927866-17927767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-136
               

               
Cow position:
               
chr18:17929336-17929237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-136
               

               
Cow position:
               
chr18:18444899-18444998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-138
               

               
Cow position:
               
chr18:23053072-23052971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-214
               

               
Cow position:
               
chr18:5537038-5536847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr18:16154775-16154977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
38-224
               

               
Cow position:
               
chr18:28292037-28292240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
38-230
               

               
Cow position:
               
chr18:6441918-6441710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
38-230
               

               
Cow position:
               
chr18:6732905-6733113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr18:268332-268536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr18:9900603-9900410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 92
               

               
Conread position:
               
40-230
               

               
Cow position:
               
chr18:16641502-16641307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 121
               

               
Conread position:
               
40-230
               

               
Cow position:
               
chr18:42480293-42480480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
42-142
               

               
Cow position:
               
chr18:4103196-4103096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-233
               

               
Cow position:
               
chr18:47517723-47517914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
46-138
               

               
Cow position:
               
chr18:30608045-30607953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
48-229
               

               
Cow position:
               
chr18:53962711-53962893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
55-230
               

               
Cow position:
               
chr18:4369322-4369501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
56-230
               

               
Cow position:
               
chr18:45572785-45572612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
59-229
               

               
Cow position:
               
chr18:33157483-33157304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
62-230
               

               
Cow position:
               
chr18:24686124-24685956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
65-230
               

               
Cow position:
               
chr18:36232837-36233018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 108
               
Show alignments to all cow chromosomes.