Cow genome map
| Conread name: | Ss1.1-Pig2-25P02.5 |
| Conread position: | 532-796 |
| Cow position: | chr10:931941-932208 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 561-734 |
| Cow position: | chr10:23068596-23068419 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 565-800 |
| Cow position: | chr10:40717757-40717991 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 565-800 |
| Cow position: | chr10:69628206-69628443 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 565-802 |
| Cow position: | chr10:32912874-32912633 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 566-800 |
| Cow position: | chr10:21387956-21388203 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 566-804 |
| Cow position: | chr10:52420184-52419950 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 567-744 |
| Cow position: | chr10:25927012-25926831 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 568-800 |
| Cow position: | chr10:1036362-1036593 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 568-802 |
| Cow position: | chr10:63685091-63684850 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 568-802 |
| Cow position: | chr10:65366731-65366963 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 571-714 |
| Cow position: | chr10:33813721-33813861 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 127 |
| Conread position: | 571-797 |
| Cow position: | chr10:23860147-23859911 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 571-800 |
| Cow position: | chr10:838425-838196 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 571-802 |
| Cow position: | chr10:27687733-27687499 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 572-800 |
| Cow position: | chr10:16732490-16732715 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 572-800 |
| Cow position: | chr10:32420947-32421182 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 158 |
| Conread position: | 572-800 |
| Cow position: | chr10:33720894-33720655 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 575-802 |
| Cow position: | chr10:68375242-68375460 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 576-798 |
| Cow position: | chr10:36211114-36211345 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 577-747 |
| Cow position: | chr10:133188-133356 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 579-802 |
| Cow position: | chr10:27686889-27686666 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 581-800 |
| Cow position: | chr10:32983194-32983423 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 582-800 |
| Cow position: | chr10:349650-349867 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 583-802 |
| Cow position: | chr10:62892245-62892459 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 585-766 |
| Cow position: | chr10:7730350-7730533 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 594-783 |
| Cow position: | chr10:51425179-51424997 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 604-741 |
| Cow position: | chr10:27415004-27415138 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 611-802 |
| Cow position: | chr10:42349116-42349305 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 621-779 |
| Cow position: | chr10:52450164-52450007 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 648-774 |
| Cow position: | chr10:17315949-17315827 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 648-800 |
| Cow position: | chr10:27306159-27306007 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.