Cow genome map
| Conread name: | Ss1.1-Pig2-25P02.5 |
| Conread position: | 554-760 |
| Cow position: | chr17:24583840-24584050 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 559-802 |
| Cow position: | chr17:1491510-1491263 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 562-798 |
| Cow position: | chr17:1756694-1756936 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 562-800 |
| Cow position: | chr17:31562106-31562351 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 566-785 |
| Cow position: | chr17:16380332-16380556 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 161 |
| Conread position: | 566-800 |
| Cow position: | chr17:25546000-25546239 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 566-802 |
| Cow position: | chr17:4879435-4879196 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 567-741 |
| Cow position: | chr17:6763318-6763136 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 125 |
| Conread position: | 567-747 |
| Cow position: | chr17:11244717-11244533 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 568-769 |
| Cow position: | chr17:1325466-1325264 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 568-800 |
| Cow position: | chr17:16360176-16359943 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 131 |
| Conread position: | 568-802 |
| Cow position: | chr17:1730475-1730237 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 568-802 |
| Cow position: | chr17:11072506-11072271 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 568-802 |
| Cow position: | chr17:15483523-15483757 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 568-802 |
| Cow position: | chr17:21591539-21591775 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 571-798 |
| Cow position: | chr17:38189690-38189914 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 571-800 |
| Cow position: | chr17:17641636-17641873 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 571-802 |
| Cow position: | chr17:24861880-24861648 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 572-787 |
| Cow position: | chr17:21461351-21461134 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 576-747 |
| Cow position: | chr17:27761409-27761234 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 576-749 |
| Cow position: | chr17:11124205-11124382 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 576-800 |
| Cow position: | chr17:27302119-27302347 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 576-802 |
| Cow position: | chr17:21585407-21585636 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 578-796 |
| Cow position: | chr17:11052231-11052005 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 580-783 |
| Cow position: | chr17:10636179-10636391 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 585-797 |
| Cow position: | chr17:891479-891695 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 621-760 |
| Cow position: | chr17:5347808-5347951 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 625-800 |
| Cow position: | chr17:20347126-20347298 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 648-748 |
| Cow position: | chr17:24988689-24988789 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 650-798 |
| Cow position: | chr17:24997215-24997363 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 662-800 |
| Cow position: | chr17:25147965-25148103 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.