Cow genome map
| Conread name: | Ss1.1-Pig2-25P02.5 |
| Conread position: | 431-565 |
| Cow position: | chr2:44684359-44684226 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 107 |
| Conread position: | 561-800 |
| Cow position: | chr2:37076270-37076512 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 566-744 |
| Cow position: | chr2:1332570-1332390 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 567-713 |
| Cow position: | chr2:69184524-69184670 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 567-747 |
| Cow position: | chr2:7348046-7348231 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 567-800 |
| Cow position: | chr2:46008352-46008588 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 45, 32 |
| Conread position: | 567-802 |
| Cow position: | chr2:46408607-46408844 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 568-778 |
| Cow position: | chr2:44556455-44556669 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 568-795 |
| Cow position: | chr2:38876830-38876606 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 568-798 |
| Cow position: | chr2:43551452-43551219 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 568-800 |
| Cow position: | chr2:38872141-38871905 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 203 |
| Conread position: | 568-802 |
| Cow position: | chr2:30639841-30639597 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 568-802 |
| Cow position: | chr2:34328657-34328892 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 568-802 |
| Cow position: | chr2:46025654-46025419 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 569-802 |
| Cow position: | chr2:12146476-12146245 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 571-790 |
| Cow position: | chr2:46773179-46773395 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 571-794 |
| Cow position: | chr2:38837964-38838191 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 571-796 |
| Cow position: | chr2:9937579-9937357 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 571-802 |
| Cow position: | chr2:16799152-16798919 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 572-801 |
| Cow position: | chr2:70829933-70829704 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 572-802 |
| Cow position: | chr2:74692864-74693101 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 574-804 |
| Cow position: | chr2:46966952-46966717 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 576-802 |
| Cow position: | chr2:57381495-57381725 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 577-747 |
| Cow position: | chr2:39579243-39579068 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 577-747 |
| Cow position: | chr2:41697675-41697501 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 580-748 |
| Cow position: | chr2:65400164-65399990 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 595-797 |
| Cow position: | chr2:45773479-45773281 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 596-796 |
| Cow position: | chr2:50138239-50138440 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 604-802 |
| Cow position: | chr2:43015392-43015585 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 611-802 |
| Cow position: | chr2:46939331-46939143 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 612-802 |
| Cow position: | chr2:17862255-17862068 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 619-749 |
| Cow position: | chr2:10969998-10970133 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 648-759 |
| Cow position: | chr2:86513672-86513782 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 650-802 |
| Cow position: | chr2:66982210-66982058 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 666-796 |
| Cow position: | chr2:28574583-28574453 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 687-798 |
| Cow position: | chr2:45284306-45284195 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 687-802 |
| Cow position: | chr2:46215535-46215650 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 689-802 |
| Cow position: | chr2:64175467-64175579 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 690-802 |
| Cow position: | chr2:2407987-2408099 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.